Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002252g0050 Nicotiana tabacum HOM05D013449 ORTHO05D015621 1.2e-180 636.3 314 100.0
Nitab4.5_0000383g0220 Nicotiana tabacum HOM05D013449 ORTHO05D015621 9.3e-165 583.6 314 92.4
PGSC0003DMG400021271 Solanum tuberosum HOM05D013449 ORTHO05D015621 3.4e-151 538.5 316 84.2
Solyc10g007190.2 Solanum lycopersicum HOM05D013449 ORTHO05D015621 3.8e-150 535.0 316 83.2
Sopen10g003290 Solanum pennellii HOM05D013449 ORTHO05D015621 3.8e-150 535.0 316 83.2
Peaxi162Scf00027g00041 Petunia axillaris HOM05D013449 ORTHO05D015621 3.1e-136 488.8 285 83.5
Cc05_g11310 Coffea canephora HOM05D013449 ORTHO05D015621 1.9e-93 346.7 278 61.2
Migut.H01983 Erythranthe guttata HOM05D013449 ORTHO05D015621 1.2e-63 247.7 282 48.6
SGA_v2.0_scaffold130G34308 Striga asiatica HOM05D013449 ORTHO05D015621 6.2e-60 235.3 265 48.3
Oeu051120.1 Olea europaea HOM05D013449 ORTHO05D015621 3.1e-27 126.7 103 61.2
Hma1.2p1_0321F.1_g124180 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-23 114.0 126 45.2
Hma1.2p1_0915F.1_g236340 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.1e-19 101.7 135 40.0
PGR119G1573 Punica granatum HOM05D013449 ORTHO05D015621 2.6e-18 97.1 98 51.0
Rhsim04G0000200 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.2e-16 90.1 116 41.4
Rhsim04G0001200 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.2e-16 90.1 116 41.4
HPP92_003916 Vanilla planifolia HOM05D000030 ORTHO05D000009 5.9e-10 69.3 109 40.4
Dinv10810 Davidia involucrata HOM05D000030 ORTHO05D000009 5.0e-09 66.2 107 33.6
Cc04_g04520 Coffea canephora HOM05D000030 ORTHO05D000009 1.1e-08 65.1 139 33.1
MELO3C032856.2 Cucumis melo HOM05D000030 ORTHO05D000009 1.9e-08 64.3 86 43.0
Ciclev10025036m.g Citrus clementina HOM05D000030 ORTHO05D000009 2.5e-08 63.9 143 32.2
Sed0004433 Sechium edule HOM05D000030 ORTHO05D000009 5.5e-08 62.8 75 41.3
A06p11300 Brassica napus HOM05D000030 ORTHO05D000009 7.2e-08 62.4 113 38.1
BraA06t24310Z Brassica rapa HOM05D000030 ORTHO05D000009 7.2e-08 62.4 113 38.1
Rhsim12G0109500 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.2e-08 62.4 115 32.2
Duzib192G0387 Durio zibethinus HOM05D000030 ORTHO05D000009 9.4e-08 62.0 112 36.6
CsaV3_4G001940 Cucumis sativus L. HOM05D000030 ORTHO05D000009 1.2e-07 61.6 79 43.0
Gohir.A06G114704 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.2e-07 61.6 100 36.0
HanXRQChr16g0500341 Helianthus annuus HOM05D000030 ORTHO05D000009 1.2e-07 61.6 123 30.1
ECA232G4030 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.6e-07 61.2 84 36.9
Gohir.D06G119650 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.6e-07 61.2 100 36.0
Gorai.010G137500 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.6e-07 61.2 100 36.0
Nitab4.5_0002693g0020 Nicotiana tabacum HOM05D000030 ORTHO05D000009 1.6e-07 61.2 99 35.4
SGA_v2.0_scaffold370G50130 Striga asiatica HOM05D000030 ORTHO05D000009 1.6e-07 61.2 111 36.0
HPP92_024324 Vanilla planifolia HOM05D013449 ORTHO05D015621 1.6e-07 61.2 58 41.4
COL.COLO4_11910 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.1e-07 60.8 153 33.3
Ah.13g071470 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.7e-07 60.5 130 33.1
ClCG07G012220 Citrullus lanatus HOM05D000030 ORTHO05D000009 2.7e-07 60.5 71 46.5
Lj1g0020133 Lotus japonicus HOM05D000030 ORTHO05D000009 2.7e-07 60.5 84 40.5
Sc14g0000160 Simmondsia chinensis HOM05D000030 ORTHO05D000009 2.7e-07 60.5 100 37.0
Duzib151G0581 Durio zibethinus HOM05D000030 ORTHO05D010590 3.6e-07 60.1 106 34.9
Gohir.D02G011301 Gossypium hirsutum HOM05D000030 ORTHO05D010590 3.6e-07 60.1 148 29.7
PGR102G3351 Punica granatum HOM05D000030 ORTHO05D000009 3.6e-07 60.1 125 34.4
Sed0003476 Sechium edule HOM05D000030 ORTHO05D000009 3.6e-07 60.1 84 39.3
SGA_v2.0_scaffold10G05123 Striga asiatica HOM05D000030 ORTHO05D000009 3.6e-07 60.1 110 37.3
Rhsim08G0113700 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-07 59.7 123 30.9
Thecc.04G172000 Theobroma cacao HOM05D000030 ORTHO05D010590 4.7e-07 59.7 125 31.2
VMungo1080G0581 Vigna mungo HOM05D000030 ORTHO05D000009 4.7e-07 59.7 121 36.4
Haze_16575 Corylus avellana HOM05D000030 ORTHO05D000009 6.1e-07 59.3 113 37.2
Gorai.013G077200 Gossypium raimondii HOM05D000030 ORTHO05D000009 6.1e-07 59.3 139 32.4
Nitab4.5_0002568g0070 Nicotiana tabacum HOM05D000001 ORTHO05D000009 6.1e-07 59.3 112 34.8
Oeu000511.1 Olea europaea HOM05D000030 ORTHO05D000009 6.1e-07 59.3 113 34.5
Oeu010033.1 Olea europaea HOM05D000030 ORTHO05D000009 6.1e-07 59.3 120 35.8
Sabra03G0017900 Salix brachista HOM05D000030 ORTHO05D000009 6.1e-07 59.3 78 44.9
MSTRG.10661 Avicennia marina HOM05D000030 ORTHO05D000009 8.0e-07 58.9 77 42.9
Hma1.2p1_1093F.1_g256040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.0e-07 58.9 91 33.0
Lalb_Chr12g0198221 Lupinus albus HOM05D000030 ORTHO05D000009 8.0e-07 58.9 74 40.5
THA.LOC104800438 Tarenaya hassleriana HOM05D000030 ORTHO05D000009 8.0e-07 58.9 84 40.5
TAR625G1298 Trochodendron aralioides HOM05D000030 ORTHO05D000009 8.0e-07 58.9 85 37.6
AL1G27390 Arabidopsis lyrata HOM05D000030 ORTHO05D000009 1.0e-06 58.5 93 36.6
CSS0031299 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.0e-06 58.5 85 38.8
Hma1.2p1_0485F.1_g163040 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 1.0e-06 58.5 116 34.5
Nitab4.5_0008645g0020 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.0e-06 58.5 106 35.8
Oeu055967.1 Olea europaea HOM05D000030 ORTHO05D000009 1.0e-06 58.5 132 33.3
Oeu060117.1 Olea europaea HOM05D000030 ORTHO05D000009 1.0e-06 58.5 76 39.5
Os01g0698300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 1.0e-06 58.5 51 52.9
SHI11240 Sapria himalayana HOM05D000030 ORTHO05D000009 1.0e-06 58.5 80 40.0
AUR62011173 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.4e-06 58.2 130 32.3
Thhalv10022530m.g Eutrema salsugineum HOM05D000030 ORTHO05D000009 1.4e-06 58.2 110 35.5
Hma1.2p1_0055F.1_g031250 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.4e-06 58.2 109 35.8
Nitab4.5_0001421g0040 Nicotiana tabacum HOM05D000030 ORTHO05D000009 1.4e-06 58.2 83 39.8
AUR62013311 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.8e-06 57.8 92 38.0
Duzib151G0422 Durio zibethinus HOM05D000030 ORTHO05D010590 1.8e-06 57.8 104 34.6
Duzib235G0631 Durio zibethinus HOM05D000030 ORTHO05D000009 1.8e-06 57.8 144 29.9
MD17G1214100 Malus domestica HOM05D000030 ORTHO05D000009 1.8e-06 57.8 136 32.4
Manes.13G091744 Manihot esculenta HOM05D000030 ORTHO05D000009 1.8e-06 57.8 117 35.0
TWI12G0050 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.8e-06 57.8 94 35.1
EL10Ac8g18717 Beta vulgaris HOM05D000030 ORTHO05D000009 2.3e-06 57.4 130 31.5
C08p17090 Brassica napus HOM05D000030 ORTHO05D000009 2.3e-06 57.4 117 36.8
BolC8t49335H Brassica oleracea HOM05D000030 ORTHO05D000009 2.3e-06 57.4 117 36.8
FvH4_6g29441 Fragaria vesca HOM05D000030 ORTHO05D000009 2.3e-06 57.4 132 32.6
Nn8g39539 Nelumbo nucifera HOM05D000030 ORTHO05D000009 2.3e-06 57.4 129 34.1
THA.LOC104820158 Tarenaya hassleriana HOM05D000030 ORTHO05D000009 2.3e-06 57.4 97 38.1
TWI34G0701 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.3e-06 57.4 88 36.4
Atru.chr1.2892 Acer truncatum HOM05D000030 ORTHO05D000009 3.0e-06 57.0 105 35.2
Solyc03g116840.3 Solanum lycopersicum HOM05D000001 ORTHO05D000009 3.0e-06 57.0 89 37.1
Sopen03g035760 Solanum pennellii HOM05D000030 ORTHO05D000009 3.0e-06 57.0 89 37.1
PGSC0003DMG400019816 Solanum tuberosum HOM05D000030 ORTHO05D000009 3.0e-06 57.0 89 37.1
Thecc.06G030400 Theobroma cacao HOM05D000030 ORTHO05D000009 3.0e-06 57.0 90 38.9
Aa31LG4G310 Aethionema arabicum HOM05D000030 ORTHO05D001438 4.0e-06 56.6 92 35.9
Migut.K00427 Erythranthe guttata HOM05D000030 ORTHO05D000009 4.0e-06 56.6 104 34.6
Lj5C74T11 Lonicera japonica HOM05D000001 ORTHO05D000009 4.0e-06 56.6 105 36.2
Manes.04G111500 Manihot esculenta HOM05D000030 ORTHO05D000009 4.0e-06 56.6 147 32.7
Peaxi162Scf01667g00006 Petunia axillaris HOM05D000030 ORTHO05D000009 4.0e-06 56.6 90 37.8
RcHm_v2.0_Chr2g0134951 Rosa chinensis HOM05D000030 ORTHO05D000009 4.0e-06 56.6 112 35.7
Hund26539 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.0e-06 56.6 85 38.8
Aqoxy7G02415 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 5.2e-06 56.2 83 38.6
AL2G41520 Arabidopsis lyrata HOM05D000030 ORTHO05D000009 5.2e-06 56.2 80 40.0
EL10Ac9g21882 Beta vulgaris HOM05D000030 ORTHO05D000009 5.2e-06 56.2 98 35.7
AUR62011507 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.2e-06 56.2 85 36.5
Ca_01049_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 5.2e-06 56.2 124 34.7
Gorai.005G013900 Gossypium raimondii HOM05D000030 ORTHO05D010590 5.2e-06 56.2 89 36.0
Oeu027840.1 Olea europaea HOM05D000030 ORTHO05D000009 5.2e-06 56.2 78 43.6
PSO675G2294 Papaver somniferum HOM05D000030 ORTHO05D000009 5.2e-06 56.2 139 30.2
PGR142G3841 Punica granatum HOM05D000030 ORTHO05D000009 5.2e-06 56.2 146 30.1
Solyc12g009640.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 5.2e-06 56.2 145 29.0
Sopen12g004630 Solanum pennellii HOM05D000030 ORTHO05D000009 5.2e-06 56.2 145 29.0
HPP92_027794 Vanilla planifolia HOM05D000030 ORTHO05D000009 5.2e-06 56.2 126 32.5
Actinidia08792 Actinidia chinensis HOM05D000030 ORTHO05D000009 6.7e-06 55.8 135 30.4
Actinidia40497 Actinidia chinensis HOM05D000030 ORTHO05D000009 6.7e-06 55.8 77 39.0
CARHR015830 Cardamine hirsuta HOM05D000030 ORTHO05D000009 6.7e-06 55.8 63 42.9
Eucgr.F03885 Eucalyptus grandis HOM05D000030 ORTHO05D000009 6.7e-06 55.8 88 39.8
Rhsim10G0136600 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.7e-06 55.8 122 29.5
SHI07178 Sapria himalayana HOM05D000105 ORTHO05D000009 6.7e-06 55.8 113 33.6
SHI12385 Sapria himalayana HOM05D000030 ORTHO05D000009 6.7e-06 55.8 113 33.6
SHI38150 Sapria himalayana HOM05D000030 ORTHO05D000009 6.7e-06 55.8 113 33.6
Sed0018973 Sechium edule HOM05D000030 ORTHO05D000009 6.7e-06 55.8 86 37.2
TWI32G0223 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 6.7e-06 55.8 88 36.4
TWI32G0880 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 6.7e-06 55.8 88 36.4
Thhalv10009614m.g Eutrema salsugineum HOM05D000030 ORTHO05D000009 8.8e-06 55.5 89 37.1
Hma1.2p1_0314F.1_g121830 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 8.8e-06 55.5 114 34.2
Psat2g107240 Pisum sativum HOM05D000030 ORTHO05D000009 8.8e-06 55.5 90 34.4
Potri.003G031700 Populus trichocarpa HOM05D000030 ORTHO05D000009 8.8e-06 55.5 107 35.5
QL10p012842 Quercus lobata HOM05D000306 ORTHO05D000410 8.8e-06 55.5 76 44.7
Sabra01G0159400 Salix brachista HOM05D000030 ORTHO05D000009 8.8e-06 55.5 66 48.5
Thecc.04G131800 Theobroma cacao HOM05D000030 ORTHO05D010590 8.8e-06 55.5 59 45.8


User provided reference genes

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