Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.4e-96 355.5 186 100.0
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.6e-87 324.7 186 92.5
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 1.2e-74 283.5 186 83.9
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 3.1e-67 258.8 188 83.5
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 4.1e-67 258.5 188 81.4
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 5.9e-66 254.6 188 80.9
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 5.7e-61 238.0 186 72.6
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 2.4e-59 232.6 186 71.0
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 8.5e-57 224.2 192 73.4
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 7.2e-56 221.1 191 68.6
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 7.2e-56 221.1 190 71.1
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.1e-53 213.8 170 72.4
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 2.6e-53 212.6 164 71.3
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 2.6e-53 212.6 186 68.8
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 3.3e-53 212.2 174 70.1
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 4.4e-53 211.8 191 63.4
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 5.7e-53 211.5 190 63.7
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 9.7e-53 210.7 151 76.8
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.3e-52 210.3 168 69.0
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 2.8e-52 209.1 194 64.4
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 3.7e-52 208.8 170 70.6
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 4.8e-52 208.4 190 62.1
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 6.3e-52 208.0 187 65.8
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 8.2e-52 207.6 172 71.5
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 8.2e-52 207.6 186 65.6
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 1.1e-51 207.2 166 70.5
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 5.3e-51 204.9 144 76.4
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 2.0e-50 203.0 186 65.6
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 2.6e-50 202.6 184 67.4
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 3.5e-50 202.2 183 68.3
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 4.5e-50 201.8 186 65.1
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 4.5e-50 201.8 190 65.3
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 1.3e-49 200.3 227 56.8
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 1.3e-49 200.3 196 65.3
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 2.9e-49 199.1 191 62.3
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 3.8e-49 198.7 191 66.5
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 6.5e-49 198.0 144 75.7
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 6.5e-49 198.0 161 72.0
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 8.5e-49 197.6 188 64.4
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 8.5e-49 197.6 188 62.2
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 8.5e-49 197.6 194 63.4
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.4e-48 196.8 138 78.3
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 1.4e-48 196.8 195 66.2
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.5e-48 196.1 188 63.8
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 3.2e-48 195.7 169 69.2
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 3.2e-48 195.7 172 68.0
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 4.2e-48 195.3 174 70.1
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 7.2e-48 194.5 169 69.2
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 7.2e-48 194.5 149 71.8
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 7.2e-48 194.5 184 60.3
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 1.2e-47 193.7 189 64.6
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 3.6e-47 192.2 169 68.0
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 1.4e-46 190.3 151 71.5
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 1.8e-46 189.9 176 66.5
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 2.3e-46 189.5 125 83.2
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 2.3e-46 189.5 185 61.6
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 3.9e-46 188.7 172 64.5
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 6.7e-46 188.0 197 61.4
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 2.0e-45 186.4 156 72.4
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.7e-45 184.9 197 58.9
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 7.4e-45 184.5 169 66.3
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 2.2e-44 183.0 193 61.7
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 2.2e-44 183.0 152 68.4
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.8e-44 182.6 161 68.3
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 4.8e-44 181.8 167 67.7
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 4.8e-44 181.8 126 78.6
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 7.0e-43 177.9 189 62.4
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 1.6e-42 176.8 127 80.3
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 2.0e-42 176.4 120 83.3
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 3.5e-42 175.6 120 82.5
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 4.5e-42 175.3 140 72.1
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.7e-41 173.3 202 58.4
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 2.2e-41 172.9 196 60.2
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 2.9e-41 172.6 150 69.3
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 3.8e-41 172.2 145 66.9
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 6.5e-41 171.4 123 78.9
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 6.5e-41 171.4 121 80.2
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 6.5e-41 171.4 123 78.9
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 6.5e-41 171.4 123 78.9
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 1.1e-40 170.6 124 78.2
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.1e-40 170.6 195 58.5
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 3.2e-40 169.1 98 88.8
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 7.2e-40 167.9 122 79.5
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 9.4e-40 167.5 144 67.4
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 2.7e-39 166.0 122 77.9
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 2.7e-39 166.0 159 61.0
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 1.8e-38 163.3 120 75.0
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 2.6e-37 159.5 191 56.0
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 3.3e-37 159.1 176 59.1
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 3.7e-36 155.6 87 92.0
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 8.3e-36 154.5 143 63.6
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 2.4e-35 152.9 100 82.0
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 5.3e-35 151.8 172 55.8
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 2.0e-34 149.8 185 50.3
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 7.7e-34 147.9 202 52.5
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 7.7e-34 147.9 202 52.5
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 1.5e-29 133.7 127 60.6
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.7e-28 129.0 84 85.7
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 6.3e-28 128.3 120 61.7
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 1.1e-27 127.5 124 62.9
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 1.8e-27 126.7 162 51.9
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 3.1e-27 125.9 125 60.0
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 9.1e-27 124.4 107 62.6
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 1.6e-26 123.6 168 49.4
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.7e-26 122.9 97 72.2
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.5e-26 122.1 82 85.4
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.5e-26 122.1 82 85.4
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.2e-23 114.0 129 56.6
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.0e-21 106.7 91 68.1
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 6.3e-20 101.7 140 43.6
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 5.9e-18 95.1 159 39.6
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 3.6e-15 85.9 122 42.6
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 4.0e-14 82.4 80 60.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 2.2e-12 76.6 90 50.0
Duzib130G0001 Durio zibethinus HOM05D006899 ORTHO05D008566 1.7e-09 67.0 91 56.0
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 2.1e-07 60.1 69 39.1


User provided reference genes

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