Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002248g0070 Nicotiana tabacum HOM05D008294 ORTHO05D010468 3.1e-63 245.0 124 100.0
Nitab4.5_0004399g0030 Nicotiana tabacum HOM05D008294 ORTHO05D010468 2.1e-43 179.1 106 86.8
Solyc02g091380.1 Solanum lycopersicum HOM05D008294 ORTHO05D010468 4.7e-35 151.4 102 77.5
PGSC0003DMG400030645 Solanum tuberosum HOM05D008294 ORTHO05D010468 1.1e-33 146.7 100 77.0
Sopen02g036000 Solanum pennellii HOM05D008294 ORTHO05D010468 2.6e-33 145.6 104 74.0
Peaxi162Scf00118g00016 Petunia axillaris HOM05D008294 ORTHO05D010468 1.3e-29 133.3 103 67.0
Nitab4.5_0002366g0040 Nicotiana tabacum HOM05D008294 ORTHO05D010468 1.1e-28 130.2 103 67.0
SalBow7G4521 Salvia bowleyana HOM05D008294 ORTHO05D010468 1.3e-21 106.7 107 51.4
MSTRG.3520 Avicennia marina HOM05D008294 ORTHO05D010468 1.5e-20 103.2 114 50.9
ECA238G3741 Erigeron canadensis HOM05D008294 ORTHO05D010468 3.2e-20 102.1 98 57.1
HanXRQChr14g0439951 Helianthus annuus HOM05D008294 ORTHO05D010468 1.2e-19 100.1 105 52.4
Oeu054753.1 Olea europaea HOM05D008294 ORTHO05D010468 1.6e-19 99.8 108 50.0
Cc07_g08180 Coffea canephora HOM05D008294 ORTHO05D010468 2.1e-19 99.4 105 50.5
Manes.01G115600 Manihot esculenta HOM05D008294 ORTHO05D010468 1.0e-18 97.1 103 48.5
SGA_v2.0_scaffold329G48860 Striga asiatica HOM05D008294 ORTHO05D010468 2.0e-17 92.8 108 49.1
PGSC0003DMG400016702 Solanum tuberosum HOM05D008294 ORTHO05D010468 5.7e-17 91.3 98 54.1
Sopen03g007510 Solanum pennellii HOM05D008294 ORTHO05D010468 1.3e-16 90.1 98 53.1
Lsat_1_v5_gn_2_81341 Lactuca sativa HOM05D008294 ORTHO05D010468 1.7e-16 89.7 105 48.6
Eucgr.F02821 Eucalyptus grandis HOM05D008294 ORTHO05D010468 2.8e-16 89.0 90 48.9
Thecc.04G121200 Theobroma cacao HOM05D008294 ORTHO05D010468 6.3e-16 87.8 102 42.2
Gorai.008G058300 Gossypium raimondii HOM05D008294 ORTHO05D010468 8.3e-16 87.4 126 38.9
GSVIVG01030864001 Vitis vinifera HOM05D008294 ORTHO05D010468 1.4e-15 86.7 105 43.8
Atru.chr13.2285 Acer truncatum HOM05D008294 ORTHO05D010468 3.1e-15 85.5 104 45.2
QL11p004113 Quercus lobata HOM05D008294 ORTHO05D010468 4.1e-15 85.1 99 46.5
MELO3C020292.2 Cucumis melo HOM05D008294 ORTHO05D010468 7.0e-15 84.3 111 39.6
Ciclev10013091m.g Citrus clementina HOM05D008294 ORTHO05D010468 1.2e-14 83.6 108 43.5
DCAR_025875 Daucus carota HOM05D008294 ORTHO05D010468 1.6e-14 83.2 115 40.0
ClCG05G010930 Citrullus lanatus HOM05D008294 ORTHO05D010468 2.0e-14 82.8 117 39.3
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 4.5e-14 81.6 108 39.8
Sed0009315 Sechium edule HOM05D008294 ORTHO05D010468 4.5e-14 81.6 105 39.0
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 5.9e-14 81.3 102 46.1
AUR62023240 Chenopodium quinoa HOM05D008294 ORTHO05D010468 1.0e-13 80.5 122 40.2
CsaV3_3G021650 Cucumis sativus L. HOM05D008294 ORTHO05D010468 1.0e-13 80.5 116 35.3
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 1.7e-13 79.7 107 39.3
Prupe.3G159000 Prunus persica HOM05D008294 ORTHO05D010468 2.2e-13 79.3 100 43.0
TAR017G0001 Trochodendron aralioides HOM05D008294 ORTHO05D010468 2.2e-13 79.3 104 41.3
EL10Ac2g04485 Beta vulgaris HOM05D008294 ORTHO05D010468 3.8e-13 78.6 125 38.4
Cpa.g.sc604.2 Carica papaya HOM05D008294 ORTHO05D010468 3.8e-13 78.6 99 41.4
Migut.L00469 Erythranthe guttata HOM05D008294 ORTHO05D010468 1.1e-12 77.0 119 42.9
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 1.1e-12 77.0 108 38.9
Sc10g0000850 Simmondsia chinensis HOM05D008294 ORTHO05D010468 1.1e-12 77.0 115 41.7
Nn3g18213 Nelumbo nucifera HOM05D008294 ORTHO05D010468 3.2e-12 75.5 71 52.1
Glyma.14G069300 Glycine max HOM05D008294 ORTHO05D010468 7.2e-12 74.3 104 41.3
Lj1g0007014 Lotus japonicus HOM05D008294 ORTHO05D010468 1.2e-11 73.6 102 39.2
Migut.H00270 Erythranthe guttata HOM05D008294 ORTHO05D010468 1.6e-11 73.2 74 50.0
Glyma.02G246900 Glycine max HOM05D008294 ORTHO05D010468 1.6e-11 73.2 106 39.6
Gohir.D12G055400 Gossypium hirsutum HOM05D008294 ORTHO05D010468 3.6e-11 72.0 98 36.7
Lalb_Chr04g0251301 Lupinus albus HOM05D008294 ORTHO05D010468 3.6e-11 72.0 108 37.0
Phvul.008G234000 Phaseolus vulgaris HOM05D008294 ORTHO05D010468 6.1e-11 71.2 107 34.6
Lalb_Chr17g0346181 Lupinus albus HOM05D008294 ORTHO05D010468 1.8e-10 69.7 106 35.8
arahy.Tifrunner.gnm1.ann1.RHD4AQ Arachis hypogaea HOM05D008294 ORTHO05D010468 8.8e-10 67.4 119 35.3
arahy.Tifrunner.gnm1.ann1.HG0CBG Arachis hypogaea HOM05D008294 ORTHO05D010468 1.2e-09 67.0 119 34.5
Ah.16g101330 Amaranthus hybridus HOM05D008294 ORTHO05D010468 2.6e-09 65.9 82 45.1
VMungo0647G1342 Vigna mungo HOM05D008294 ORTHO05D010468 5.7e-09 64.7 101 35.6
Zm00001eb334540 Zea mays HOM05D008294 ORTHO05D010468 6.3e-08 61.2 76 43.4
AT1G49000 Arabidopsis thaliana HOM05D002803 ORTHO05D003089 2.4e-07 59.3 93 36.6
Peaxi162Scf00015g00069 Petunia axillaris HOM05D002803 ORTHO05D003089 9.2e-07 57.4 75 41.3
Medtr5g079600 Medicago truncatula HOM05D008294 ORTHO05D010468 1.2e-06 57.0 93 32.3
Nitab4.5_0003716g0110 Nicotiana tabacum HOM05D002803 ORTHO05D003089 1.2e-06 57.0 75 40.0
Sed0002511 Sechium edule HOM05D002803 ORTHO05D003089 1.2e-06 57.0 69 40.6
Nitab4.5_0000410g0140 Nicotiana tabacum HOM05D002803 ORTHO05D003089 2.7e-06 55.8 75 40.0
DCAR_030089 Daucus carota HOM05D002803 ORTHO05D003089 3.5e-06 55.5 77 44.2
AL1G55870 Arabidopsis lyrata HOM05D002803 ORTHO05D003089 4.5e-06 55.1 91 37.4
Glyma.17G018400 Glycine max HOM05D002803 ORTHO05D003089 5.9e-06 54.7 48 45.8
Lalb_Chr07g0178561 Lupinus albus HOM05D002803 ORTHO05D003089 5.9e-06 54.7 66 40.9
Os01g0111700 Oryza sativa ssp. japonica HOM05D008294 ORTHO05D010468 5.9e-06 54.7 73 38.4
Medtr4g077777 Medicago truncatula HOM05D002803 ORTHO05D003089 7.7e-06 54.3 73 39.7
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 7.7e-06 54.3 68 36.8


User provided reference genes

Program Settings