Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.7e-216 755.7 382 100.0
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.5e-196 689.5 413 86.9
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 6.0e-182 641.0 394 82.2
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 1.1e-180 636.7 390 83.3
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 2.8e-179 632.1 394 81.7
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 1.3e-160 570.1 390 72.8
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 5.1e-157 558.1 396 71.2
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 4.3e-156 555.1 410 68.3
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 2.0e-153 546.2 392 70.4
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 1.3e-152 543.5 391 68.3
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 7.1e-151 537.7 390 68.2
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 9.3e-151 537.3 401 67.6
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 6.7e-149 531.2 388 69.1
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 8.7e-149 530.8 396 66.4
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 1.9e-148 529.6 391 66.0
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 2.5e-148 529.3 420 64.8
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 3.3e-148 528.9 397 66.0
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 6.2e-147 524.6 395 67.1
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 6.2e-147 524.6 390 67.7
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 1.2e-145 520.4 396 64.4
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 5.8e-145 518.1 401 64.8
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 5.5e-143 511.5 391 66.5
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 1.2e-142 510.4 393 65.1
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 1.2e-142 510.4 396 65.9
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 4.6e-142 508.4 400 63.8
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 1.0e-141 507.3 391 65.5
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 1.3e-141 506.9 392 64.3
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 1.8e-141 506.5 392 66.3
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.0e-141 505.8 401 63.1
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 6.7e-141 504.6 400 63.2
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 6.7e-141 504.6 398 64.1
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 6.7e-141 504.6 391 62.4
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.7e-141 504.2 400 62.8
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 7.4e-140 501.1 391 65.0
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 9.6e-140 500.7 401 62.3
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 2.1e-139 499.6 394 63.2
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 3.7e-139 498.8 390 63.1
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 3.7e-139 498.8 395 62.3
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 4.8e-139 498.4 393 64.1
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 6.2e-139 498.0 381 65.1
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 1.1e-138 497.3 398 63.3
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 4.0e-138 495.4 451 58.1
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 5.3e-138 495.0 391 64.7
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 6.9e-138 494.6 390 62.6
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 2.2e-136 489.6 391 63.4
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 2.9e-136 489.2 401 60.3
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 5.0e-136 488.4 283 87.3
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 2.5e-135 486.1 398 62.1
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 4.2e-135 485.3 417 60.4
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 4.2e-135 485.3 392 62.8
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 3.5e-134 482.3 391 61.9
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 3.5e-134 482.3 391 62.4
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 6.1e-134 481.5 414 60.4
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 6.1e-134 481.5 338 69.2
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 1.0e-133 480.7 391 63.2
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.8e-133 479.9 381 64.0
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 3.9e-133 478.8 393 61.1
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 5.1e-133 478.4 392 61.7
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 1.1e-132 477.2 393 61.1
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 7.4e-132 474.6 390 61.0
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 9.7e-132 474.2 391 60.6
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 2.2e-131 473.0 404 59.7
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 3.7e-131 472.2 393 61.1
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 8.2e-131 471.1 391 60.4
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 1.4e-130 470.3 391 60.1
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 2.4e-130 469.5 403 60.0
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 4.1e-130 468.8 402 59.2
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 4.1e-130 468.8 390 60.0
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 5.3e-130 468.4 360 66.9
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 5.3e-130 468.4 392 60.5
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 6.9e-130 468.0 381 63.5
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 1.5e-129 466.8 272 86.0
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 2.0e-129 466.5 393 60.3
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 2.6e-129 466.1 391 60.6
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 3.4e-129 465.7 433 56.8
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 5.9e-129 464.9 433 56.4
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 2.2e-128 463.0 477 52.6
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 6.5e-128 461.5 393 60.3
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 4.6e-126 455.3 391 59.6
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 4.6e-126 455.3 373 61.1
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 5.1e-125 451.8 502 50.6
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 7.4e-124 448.0 332 66.0
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 2.2e-123 446.4 393 58.3
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 7.7e-121 438.0 432 55.6
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 6.5e-120 434.9 371 60.9
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 1.2e-118 430.6 392 56.1
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 2.7e-118 429.5 415 55.9
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 7.9e-118 427.9 373 60.3
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 3.3e-116 422.5 381 59.8
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 3.6e-110 402.5 332 59.6
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 1.5e-108 397.1 272 71.3
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 6.5e-104 381.7 313 61.0
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 4.1e-98 362.5 398 50.3
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.0e-92 343.6 302 61.3
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 8.6e-88 328.2 400 45.2
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 5.6e-87 325.5 401 44.6
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 1.5e-79 300.8 289 54.7
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 3.3e-79 299.7 397 43.8
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 1.8e-77 293.9 220 64.1
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.6e-76 290.0 250 62.0
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 3.0e-72 276.6 241 58.9
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 2.5e-71 273.5 236 61.4
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 8.1e-70 268.5 482 35.7
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 8.1e-70 268.5 193 71.0
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 3.2e-66 256.5 346 40.8
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 6.0e-57 225.7 314 42.4
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 3.9e-40 169.9 130 69.2
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 2.5e-39 167.2 153 57.5
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 5.8e-36 156.0 532 25.4
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 1.6e-30 137.9 104 62.5
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 1.2e-28 131.7 171 43.9
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 1.4e-26 124.8 91 64.8
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 1.9e-26 124.4 80 67.5
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 1.1e-23 115.2 79 64.6
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 2.5e-23 114.0 182 39.0
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 7.4e-23 112.5 110 53.6
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 1.4e-18 98.2 75 68.0
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 1.6e-17 94.7 68 58.8
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.7e-17 94.0 127 44.1
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.9e-17 92.4 127 43.3
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.9e-17 92.4 127 43.3
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.9e-17 92.4 127 43.3
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.9e-17 92.4 127 43.3
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.0e-16 92.0 127 43.3
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 1.0e-16 92.0 128 44.5
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 1.3e-16 91.7 70 61.4
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 8.7e-16 89.0 60 66.7
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.1e-15 88.6 99 48.5
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.3e-15 86.7 99 47.5
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.2e-14 84.3 93 48.4
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 8.2e-14 82.4 54 72.2
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.1e-13 80.5 80 51.2
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 9.0e-13 79.0 65 63.1
Gohir.D03G005233 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.3e-11 75.1 50 68.0
Gorai.007G247100 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.3e-11 75.1 50 68.0
Gorai.012G115800 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.3e-11 75.1 50 68.0
Gorai.003G061900 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.7e-11 74.7 53 66.0
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 9.4e-10 68.9 81 46.9
Gohir.D10G126550 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.6e-09 67.0 66 53.0
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.8e-08 62.4 69 49.3
ClCG05G010860 Citrullus lanatus HOM05D002536 ORTHO05D006290 1.3e-06 58.5 44 59.1
TPR.G25728 Trifolium pratense HOM05D002536 ORTHO05D006290 1.7e-06 58.2 115 33.9


User provided reference genes

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