Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002238g0030 Nicotiana tabacum HOM05D006170 ORTHO05D007794 4.1e-71 271.2 125 100.0
Nitab4.5_0000397g0160 Nicotiana tabacum HOM05D006170 ORTHO05D007794 7.5e-49 197.2 168 65.5
Peaxi162Scf01086g00027 Petunia axillaris HOM05D006170 ORTHO05D007794 3.1e-47 191.8 189 56.1
PGSC0003DMG400019265 Solanum tuberosum HOM05D006170 ORTHO05D007794 7.0e-39 164.1 193 51.8
CAN.G337.156 Capsicum annuum HOM05D006170 ORTHO05D007794 9.1e-39 163.7 193 51.3
Solyc07g064020.4 Solanum lycopersicum HOM05D006170 ORTHO05D007794 1.9e-36 156.0 189 50.3
Sopen07g032160 Solanum pennellii HOM05D006170 ORTHO05D007794 4.3e-28 128.3 87 74.7
RhsimUnG0253700 Rhododendron simsii HOM05D006170 ORTHO05D007794 2.1e-27 125.9 182 40.7
SalBow7G2464 Salvia bowleyana HOM05D006170 ORTHO05D007794 2.8e-27 125.6 170 38.2
Actinidia09955 Actinidia chinensis HOM05D006170 ORTHO05D007794 5.2e-26 121.3 184 37.5
Cc05_g13150 Coffea canephora HOM05D006170 ORTHO05D007794 4.4e-25 118.2 183 38.3
CSS0048908 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 1.3e-24 116.7 178 37.6
Oeu007615.3 Olea europaea HOM05D006170 ORTHO05D007794 1.3e-24 116.7 181 37.0
Dinv22315 Davidia involucrata HOM05D006170 ORTHO05D007794 2.2e-24 115.9 186 36.0
vmacro09751 Vaccinium macrocarpon HOM05D006170 ORTHO05D007794 2.2e-24 115.9 184 39.1
Duzib213G0548 Durio zibethinus HOM05D006170 ORTHO05D007794 4.9e-24 114.8 186 37.1
Thecc.07G055300 Theobroma cacao HOM05D006170 ORTHO05D007794 8.3e-24 114.0 186 36.0
Ciclev10009527m.g Citrus clementina HOM05D006170 ORTHO05D007794 1.4e-23 113.2 185 36.2
CSS0004985 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 2.4e-23 112.5 178 37.1
COL.COLO4_09554 Corchorus olitorius HOM05D006170 ORTHO05D007794 5.4e-23 111.3 181 34.8
GSVIVG01014582001 Vitis vinifera HOM05D006170 ORTHO05D007794 7.0e-23 110.9 178 37.1
Duzib268G1633 Durio zibethinus HOM05D006170 ORTHO05D007794 7.8e-22 107.5 184 34.8
Glyma.13G286300 Glycine max HOM05D006170 ORTHO05D007794 7.8e-22 107.5 185 34.6
Lj8A165T103 Lonicera japonica HOM05D006170 ORTHO05D007794 7.8e-22 107.5 184 34.8
Glyma.12G215300 Glycine max HOM05D006170 ORTHO05D007794 3.0e-21 105.5 185 33.5
QL08p013814 Quercus lobata HOM05D006170 ORTHO05D007794 6.6e-21 104.4 178 36.0
vmacro22724 Vaccinium macrocarpon HOM05D006170 ORTHO05D007794 6.6e-21 104.4 89 58.4
Migut.M01817 Erythranthe guttata HOM05D006170 ORTHO05D007794 8.6e-21 104.0 192 35.9
VMungo1080G0982 Vigna mungo HOM05D006170 ORTHO05D007794 8.6e-21 104.0 185 33.5
TAR627G0202 Trochodendron aralioides HOM05D006170 ORTHO05D007794 1.1e-20 103.6 186 37.6
MBI18_g24149_MAGBIO Magnolia biondii HOM05D006170 ORTHO05D007794 3.3e-20 102.1 186 33.9
Atru.chr2.3180 Acer truncatum HOM05D006170 ORTHO05D007794 4.3e-20 101.7 80 56.2
Atru.chr2.3190 Acer truncatum HOM05D006170 ORTHO05D007794 4.3e-20 101.7 80 56.2
Potri.001G416200 Populus trichocarpa HOM05D006170 ORTHO05D007794 4.3e-20 101.7 187 33.2
TAR627G0053 Trochodendron aralioides HOM05D006170 ORTHO05D007794 4.3e-20 101.7 186 37.1
Ah.04g165500 Amaranthus hybridus HOM05D006170 ORTHO05D007794 5.6e-20 101.3 158 37.3
Nn1g06950 Nelumbo nucifera HOM05D006170 ORTHO05D007794 5.6e-20 101.3 186 34.4
Phvul.005G090600 Phaseolus vulgaris HOM05D006170 ORTHO05D007794 7.3e-20 100.9 185 31.4
Gohir.A13G141800 Gossypium hirsutum HOM05D006170 ORTHO05D007794 1.6e-19 99.8 186 34.4
Gohir.D01G060200 Gossypium hirsutum HOM05D006170 ORTHO05D007794 1.6e-19 99.8 182 34.6
Gorai.013G164300 Gossypium raimondii HOM05D006170 ORTHO05D007794 1.6e-19 99.8 186 34.4
Sabra11G0118800 Salix brachista HOM05D006170 ORTHO05D007794 1.6e-19 99.8 189 32.8
Gorai.002G081600 Gossypium raimondii HOM05D006170 ORTHO05D007794 2.1e-19 99.4 182 34.6
Lsat_1_v5_gn_7_108120 Lactuca sativa HOM05D006170 ORTHO05D007794 2.1e-19 99.4 172 33.1
Potri.011G131800 Populus trichocarpa HOM05D006170 ORTHO05D007794 2.1e-19 99.4 189 32.3
Gohir.A01G073600 Gossypium hirsutum HOM05D006170 ORTHO05D007794 2.8e-19 99.0 182 34.6
Medtr2g082180 Medicago truncatula HOM05D006170 ORTHO05D007794 4.7e-19 98.2 183 33.3
CiPaw.11G182800 Carya illinoinensis HOM05D006170 ORTHO05D007794 8.0e-19 97.4 177 35.0
FAN16G2181 Fragaria x ananassa HOM05D006170 ORTHO05D007794 1.1e-18 97.1 179 33.0
FvH4_3g21680 Fragaria vesca HOM05D006170 ORTHO05D007794 1.4e-18 96.7 179 33.0
RcHm_v2.0_Chr5g0037161 Rosa chinensis HOM05D006170 ORTHO05D007794 1.4e-18 96.7 184 33.2
TWI39G0874 Tripterygium wilfordii HOM05D006170 ORTHO05D007794 1.4e-18 96.7 183 33.9
Hund23320 Selenicereus undatus HOM05D006170 ORTHO05D007794 1.8e-18 96.3 177 34.5
Haze_09591 Corylus avellana HOM05D006170 ORTHO05D007794 2.3e-18 95.9 179 34.1
FAN25G0963 Fragaria x ananassa HOM05D006170 ORTHO05D007794 2.3e-18 95.9 179 33.0
Lj3g0005940 Lotus japonicus HOM05D006170 ORTHO05D007794 2.3e-18 95.9 183 34.4
PSO832G2973 Papaver somniferum HOM05D006170 ORTHO05D007794 2.3e-18 95.9 185 32.4
Aqoxy1G03815 Aquilegia oxysepala HOM05D006170 ORTHO05D007794 3.1e-18 95.5 184 35.3
PGR083G1948 Punica granatum HOM05D006170 ORTHO05D007794 3.1e-18 95.5 182 32.4
Lalb_Chr22g0357121 Lupinus albus HOM05D006170 ORTHO05D007794 5.2e-18 94.7 178 34.3
MD11G1228200 Malus domestica HOM05D006170 ORTHO05D007794 5.2e-18 94.7 185 34.1
PSO210G3318 Papaver somniferum HOM05D006170 ORTHO05D007794 5.2e-18 94.7 184 32.6
Cfa020437 Carpinus fangiana HOM05D006170 ORTHO05D007794 6.8e-18 94.4 179 33.5
FAN21G2913 Fragaria x ananassa HOM05D006170 ORTHO05D007794 6.8e-18 94.4 179 32.4
Gohir.D13G146500 Gossypium hirsutum HOM05D006170 ORTHO05D007794 6.8e-18 94.4 186 34.4
Manes.03G122000 Manihot esculenta HOM05D006170 ORTHO05D007794 6.8e-18 94.4 181 33.7
Psat5g249640 Pisum sativum HOM05D006170 ORTHO05D007794 6.8e-18 94.4 179 32.4
CiPaw.12G125700 Carya illinoinensis HOM05D006170 ORTHO05D007794 1.5e-17 93.2 183 33.3
Medtr0769s0020 Medicago truncatula HOM05D006170 ORTHO05D007794 2.0e-17 92.8 86 48.8
MD03G1213300 Malus domestica HOM05D006170 ORTHO05D007794 3.4e-17 92.0 186 33.9
TPR.G36813 Trifolium pratense HOM05D006170 ORTHO05D007794 3.4e-17 92.0 177 32.2
ClCG10G005700 Citrullus lanatus HOM05D006170 ORTHO05D007794 4.4e-17 91.7 79 50.6
Sabra16G0282800 Salix brachista HOM05D006170 ORTHO05D007794 5.8e-17 91.3 183 32.2
AUR62029239 Chenopodium quinoa HOM05D006170 ORTHO05D007794 9.8e-17 90.5 162 33.3
Prupe.4G201100 Prunus persica HOM05D006170 ORTHO05D007794 9.8e-17 90.5 90 48.9
Sed0018130 Sechium edule HOM05D006170 ORTHO05D007794 2.2e-16 89.4 184 31.0
HanXRQChr11g0332711 Helianthus annuus HOM05D006170 ORTHO05D007794 3.7e-16 88.6 175 33.7
AUR62015633 Chenopodium quinoa HOM05D006170 ORTHO05D007794 4.9e-16 88.2 162 32.1
ECA236G0468 Erigeron canadensis HOM05D006170 ORTHO05D007794 8.3e-16 87.4 72 51.4
Manes.15G077500 Manihot esculenta HOM05D006170 ORTHO05D007794 8.3e-16 87.4 76 52.6
arahy.Tifrunner.gnm1.ann1.I4GK8M Arachis hypogaea HOM05D006170 ORTHO05D007794 1.1e-15 87.0 184 32.1
Eucgr.F00998 Eucalyptus grandis HOM05D006170 ORTHO05D007794 1.1e-15 87.0 81 45.7
SGA_v2.0_scaffold34G13954 Striga asiatica HOM05D000141 ORTHO05D001968 1.4e-15 86.7 86 44.2
arahy.Tifrunner.gnm1.ann1.IBV8H8 Arachis hypogaea HOM05D006170 ORTHO05D007794 1.9e-15 86.3 186 31.7
Cpa.g.sc97.82 Carica papaya HOM05D006170 ORTHO05D007794 1.9e-15 86.3 173 31.2
Thhalv10014749m.g Eutrema salsugineum HOM05D006170 ORTHO05D007794 2.4e-15 85.9 79 53.2
Ca_01769_v3 Cicer arietinum L. HOM05D006170 ORTHO05D007794 3.2e-15 85.5 76 50.0
EL10Ac4g07990 Beta vulgaris HOM05D006170 ORTHO05D007794 4.1e-15 85.1 72 52.8
Sp6g16620 Schrenkiella parvula HOM05D006170 ORTHO05D007794 4.1e-15 85.1 79 51.9
Sc03g0009170 Simmondsia chinensis HOM05D006170 ORTHO05D007794 9.2e-15 84.0 180 28.3
Lalb_Chr14g0366041 Lupinus albus HOM05D006170 ORTHO05D007794 1.2e-14 83.6 179 33.5
AL8G30110 Arabidopsis lyrata HOM05D006170 ORTHO05D007794 2.1e-14 82.8 79 50.6
Carub.0008s1492 Capsella rubella HOM05D006170 ORTHO05D007794 2.1e-14 82.8 79 49.4
unitig_37.g12585 Utricularia gibba HOM05D006170 ORTHO05D007794 2.1e-14 82.8 174 31.0
AT5G54660 Arabidopsis thaliana HOM05D006170 ORTHO05D007794 2.7e-14 82.4 79 49.4
A02p10120 Brassica napus HOM05D006170 ORTHO05D007794 2.7e-14 82.4 75 52.0
BraA02t06083Z Brassica rapa HOM05D006170 ORTHO05D007794 2.7e-14 82.4 75 52.0
CANSAT11G1152 Cannabis sativa HOM05D006170 ORTHO05D007794 2.7e-14 82.4 85 50.6
BcaB05g22153 Brassica carinata HOM05D006170 ORTHO05D007794 3.5e-14 82.0 75 52.0
VMungo1127G1132 Vigna mungo HOM05D006170 ORTHO05D007794 4.6e-14 81.6 176 30.7
C09p45040 Brassica napus HOM05D006170 ORTHO05D007794 1.0e-13 80.5 79 50.6
HPP92_000867 Vanilla planifolia HOM05D006170 ORTHO05D007794 1.3e-13 80.1 70 52.9
BcaC04g20316 Brassica carinata HOM05D006170 ORTHO05D007794 1.7e-13 79.7 79 50.6
BolC9t57379H Brassica oleracea HOM05D006170 ORTHO05D007794 1.7e-13 79.7 79 50.6
BcaC03g14298 Brassica carinata HOM05D006170 ORTHO05D007794 3.0e-13 79.0 75 50.7
A10p11950 Brassica napus HOM05D006170 ORTHO05D007794 3.0e-13 79.0 84 48.8
C02p16810 Brassica napus HOM05D006170 ORTHO05D007794 3.0e-13 79.0 75 50.7
BolC2t07784H Brassica oleracea HOM05D006170 ORTHO05D007794 3.0e-13 79.0 75 50.7
Aa31LG3G10590 Aethionema arabicum HOM05D006170 ORTHO05D007794 5.1e-13 78.2 80 46.2
CDE05G2462 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 5.1e-13 78.2 92 40.2
BraA10t43291Z Brassica rapa HOM05D006170 ORTHO05D007794 8.6e-13 77.4 79 49.4
Os05g0500500 Oryza sativa ssp. japonica HOM05D006170 ORTHO05D007794 1.9e-12 76.3 81 45.7
THA.LOC104799886 Tarenaya hassleriana HOM05D006170 ORTHO05D007794 1.9e-12 76.3 89 42.7
CDE05G1194 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 5.6e-12 74.7 92 38.0
BcaB08g35828 Brassica carinata HOM05D006170 ORTHO05D007794 7.3e-12 74.3 79 49.4
MELO3C025424.2 Cucumis melo HOM05D006170 ORTHO05D007794 7.3e-12 74.3 71 52.1
Zm00001eb291920 Zea mays HOM05D006170 ORTHO05D007794 7.3e-12 74.3 76 43.4
CsaV3_3G005420 Cucumis sativus L. HOM05D006170 ORTHO05D007794 9.5e-12 73.9 71 50.7
Zm00001eb352720 Zea mays HOM05D006170 ORTHO05D007794 1.6e-11 73.2 71 45.1
SEGI_04384 Sequoiadendron giganteum HOM05D006170 ORTHO05D000001 8.3e-08 60.8 86 37.2
ATR1088G045 Amborella trichopoda HOM05D006170 ORTHO05D007794 1.9e-07 59.7 60 43.3


User provided reference genes

Program Settings