Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 0.0e+00 1465.7 722 100.0
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 0.0e+00 1137.9 821 72.7
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 0.0e+00 1120.1 820 71.6
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 6.0e-284 980.7 765 71.8
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 1.5e-263 912.9 774 62.7
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 2.0e-263 912.5 782 61.4
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 3.4e-263 911.8 778 61.3
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 7.6e-263 910.6 729 65.3
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 2.5e-253 879.0 830 57.1
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 4.6e-252 874.8 811 58.8
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 1.5e-239 833.2 537 79.9
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 3.4e-239 832.0 709 62.1
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 1.0e-235 820.5 825 55.0
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 3.0e-235 818.9 701 63.3
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 3.0e-235 818.9 599 72.1
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 5.2e-235 818.1 928 50.1
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 3.3e-234 815.5 741 59.0
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 3.1e-232 808.9 720 59.6
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 3.5e-231 805.4 733 57.4
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 6.5e-230 801.2 640 63.0
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 1.6e-228 796.6 744 56.5
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 5.7e-226 788.1 754 56.4
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 7.5e-226 787.7 736 56.9
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 7.5e-226 787.7 749 56.7
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 2.2e-225 786.2 767 54.8
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 4.8e-225 785.0 743 57.2
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 1.2e-223 780.4 735 57.7
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 1.7e-222 776.5 710 57.6
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 3.8e-222 775.4 739 56.4
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 2.5e-221 772.7 696 56.6
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 7.2e-221 771.2 792 55.2
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 9.4e-221 770.8 735 55.1
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 1.2e-220 770.4 694 58.5
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 3.6e-220 768.8 736 55.6
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 3.0e-219 765.8 771 53.3
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 1.2e-218 763.8 741 55.9
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 2.0e-218 763.1 779 54.3
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 4.4e-218 761.9 768 54.0
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 7.0e-216 754.6 693 55.8
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 1.2e-215 753.8 778 54.0
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 3.5e-215 752.3 729 54.7
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 5.9e-215 751.5 568 65.1
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 7.7e-215 751.1 670 59.0
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 5.5e-213 745.0 707 56.3
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 4.7e-212 741.9 566 65.2
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 8.9e-211 737.6 742 53.9
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 3.4e-210 735.7 736 54.2
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 5.7e-210 734.9 637 59.3
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 9.8e-210 734.2 656 57.8
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 1.7e-209 733.4 647 58.0
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 6.3e-209 731.5 692 57.1
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.4e-208 730.3 733 54.6
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 1.2e-207 727.2 704 55.0
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.6e-207 726.9 740 53.6
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 2.7e-207 726.1 632 58.9
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.9e-206 722.6 589 61.1
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 8.6e-206 721.1 639 57.3
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 1.1e-205 720.7 580 63.6
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 3.3e-205 719.2 704 54.8
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 3.3e-205 719.2 784 51.3
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 2.3e-203 713.0 569 62.2
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 2.3e-203 713.0 760 51.8
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 7.5e-202 708.0 635 58.9
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 7.5e-202 708.0 566 62.5
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 7.5e-202 708.0 723 53.9
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 1.9e-200 703.4 778 51.3
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 1.9e-200 703.4 676 55.6
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 4.1e-200 702.2 616 58.8
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 2.7e-199 699.5 746 52.1
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 4.6e-199 698.7 565 63.9
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 3.3e-197 692.6 728 52.5
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 3.6e-196 689.1 630 57.3
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 8.0e-196 688.0 735 51.7
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 3.1e-195 686.0 596 59.6
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 5.2e-195 685.3 630 57.0
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 1.5e-194 683.7 714 52.0
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 7.5e-194 681.4 518 64.5
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 3.0e-190 669.5 515 65.2
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.6e-188 662.5 597 58.5
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 1.1e-187 661.0 765 50.1
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 6.8e-187 658.3 717 51.9
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 3.5e-183 646.0 677 52.7
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.5e-178 630.6 543 59.1
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 4.2e-176 622.5 554 57.9
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.0e-174 617.8 545 59.4
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 4.3e-173 612.5 639 53.2
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 3.1e-171 606.3 386 75.9
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 5.8e-170 602.1 692 51.0
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 9.9e-170 601.3 729 47.3
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 3.8e-169 599.4 503 60.8
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 3.3e-165 586.3 619 51.2
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 3.4e-162 576.2 443 63.7
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 4.6e-159 565.8 646 50.0
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 1.1e-155 554.7 728 45.7
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 2.0e-154 550.4 446 61.4
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 1.8e-131 474.2 711 43.9
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 1.0e-110 405.2 364 56.6
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 2.9e-105 387.1 416 50.5
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 4.2e-104 383.3 436 51.1
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 3.5e-98 363.6 749 34.2
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 3.9e-89 333.6 212 70.8
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 5.6e-88 329.7 246 69.1
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 7.8e-82 309.3 313 53.0
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 3.2e-67 260.8 174 77.0
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.8e-62 245.0 308 48.7
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 4.0e-62 243.8 670 29.6
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 9.0e-54 216.1 328 42.4
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 4.6e-50 203.8 320 40.6
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 1.1e-48 199.1 330 38.8
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 9.6e-48 196.1 245 44.9
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 9.3e-43 179.5 247 43.3
Glyma.11G176306 Glycine max HOM05D005348 ORTHO05D006635 7.4e-40 169.9 94 79.8
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 4.8e-39 167.2 119 71.4
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 4.5e-37 160.6 209 45.0
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 1.0e-36 159.5 118 66.1
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 8.7e-33 146.4 221 43.0
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 1.1e-32 146.0 331 29.6
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 2.8e-31 141.4 389 27.2
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 1.7e-28 132.1 531 24.1
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.9e-27 128.6 200 41.0
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 7.2e-27 126.7 130 56.9
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 9.3e-27 126.3 101 57.4
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 1.2e-26 125.9 325 27.7
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 1.1e-22 112.8 106 57.5
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 3.1e-22 111.3 210 37.1
arahy.Tifrunner.gnm1.ann1.AXGL4F Arachis hypogaea HOM05D005348 ORTHO05D006635 2.3e-17 95.1 62 71.0
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 6.7e-17 93.6 232 32.8
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 7.4e-16 90.1 538 21.9
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 8.2e-15 86.7 78 57.7
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.0e-12 79.7 118 46.6
CsaV3_6G021380 Cucumis sativus L. HOM05D005348 ORTHO05D006635 2.0e-08 65.5 63 54.0
BcaC02g11919 Brassica carinata HOM05D028931 ORTHO05D032467 3.7e-07 61.2 92 41.3
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 9.1e-06 56.6 49 57.1


User provided reference genes

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