Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.6e-106 389.4 198 100.0
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 4.1e-102 374.8 198 96.0
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 7.8e-93 344.0 198 84.3
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 7.3e-91 337.4 198 84.3
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.9e-83 312.8 182 85.2
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 2.8e-74 282.3 157 90.4
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.9e-70 269.6 180 74.4
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 1.8e-68 263.1 182 70.3
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 3.0e-68 262.3 176 72.7
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 5.6e-67 258.1 141 89.4
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 1.3e-66 256.9 174 72.4
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 2.8e-66 255.8 180 70.6
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 1.4e-65 253.4 182 68.1
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 3.1e-65 252.3 176 71.0
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 5.3e-65 251.5 182 67.6
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 9.0e-65 250.8 177 68.4
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 1.5e-64 250.0 176 69.9
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 1.5e-64 250.0 176 68.2
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 1.5e-64 250.0 171 71.3
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 2.6e-64 249.2 177 67.2
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 4.5e-64 248.4 178 67.4
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 7.6e-64 247.7 180 67.2
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 1.3e-63 246.9 177 66.7
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.2e-63 246.1 177 67.2
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 2.2e-63 246.1 177 66.7
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 2.9e-63 245.7 180 66.7
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 4.9e-63 245.0 181 66.3
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 8.4e-63 244.2 180 66.1
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 8.4e-63 244.2 180 66.1
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.9e-62 243.0 180 67.8
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 1.9e-62 243.0 180 67.8
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 4.2e-62 241.9 172 66.9
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 9.3e-62 240.7 181 65.2
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 9.3e-62 240.7 182 64.3
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.2e-61 240.4 180 67.2
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.6e-61 240.0 178 66.9
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 2.7e-61 239.2 181 65.7
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 1.0e-60 237.3 181 64.6
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 2.3e-60 236.1 174 64.9
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 3.0e-60 235.7 171 67.8
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 3.0e-60 235.7 159 71.7
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 5.1e-60 235.0 176 64.8
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 1.5e-59 233.4 171 67.8
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 3.3e-59 232.3 168 66.7
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.8e-58 229.2 180 63.9
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 3.7e-58 228.8 156 71.2
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 6.3e-58 228.0 191 60.2
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.4e-57 226.9 177 62.1
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 2.4e-57 226.1 177 62.1
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 2.4e-57 226.1 178 62.4
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 3.1e-57 225.7 169 65.1
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 5.3e-57 224.9 177 62.1
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 9.0e-57 224.2 177 61.6
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 1.2e-56 223.8 192 58.3
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 2.6e-56 222.6 171 62.6
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 7.6e-56 221.1 175 62.3
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 1.3e-55 220.3 181 60.8
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 2.9e-55 219.2 167 66.5
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 6.5e-55 218.0 179 60.3
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 1.4e-54 216.9 181 58.6
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 1.4e-54 216.9 181 58.6
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 1.4e-54 216.9 170 62.9
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 2.5e-54 216.1 177 59.3
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.5e-54 216.1 179 59.2
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 3.2e-54 215.7 181 59.1
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 9.3e-54 214.2 170 62.4
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 1.2e-53 213.8 155 68.4
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 2.1e-53 213.0 175 58.3
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 2.1e-53 213.0 178 57.3
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 4.6e-53 211.8 171 59.6
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 4.6e-53 211.8 174 61.5
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 7.9e-53 211.1 170 61.2
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 1.0e-52 210.7 180 58.9
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 2.3e-52 209.5 170 60.0
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 5.1e-52 208.4 166 63.3
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 8.7e-52 207.6 171 59.1
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 1.5e-51 206.8 169 59.8
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.5e-51 206.8 170 59.4
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 1.9e-51 206.5 170 61.8
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 5.7e-51 204.9 157 65.0
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 1.6e-50 203.4 171 57.3
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 2.2e-50 203.0 153 62.7
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 3.7e-50 202.2 175 56.6
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 3.7e-50 202.2 170 57.1
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 6.3e-50 201.4 152 62.5
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 8.5e-47 191.0 170 57.1
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 6.1e-45 184.9 192 52.6
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 3.0e-44 182.6 191 52.4
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 9.7e-43 177.6 132 65.2
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 2.2e-42 176.4 189 49.7
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 1.1e-41 174.1 131 64.9
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 3.4e-40 169.1 131 59.5
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.3e-39 167.2 134 63.4
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 2.9e-39 166.0 180 47.2
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 6.5e-39 164.9 171 50.3
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.4e-38 163.7 128 60.9
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 1.9e-38 163.3 127 62.2
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 9.4e-38 161.0 128 59.4
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 6.1e-37 158.3 126 62.7
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 9.7e-35 151.0 196 44.4
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 3.7e-34 149.1 103 71.8
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 7.7e-32 141.4 98 69.4
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 2.9e-31 139.4 153 48.4
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 2.6e-27 126.3 152 46.1
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 4.5e-24 115.5 168 39.9
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 1.0e-23 114.4 121 47.1
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 1.0e-20 104.4 172 37.8
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 8.3e-18 94.7 146 41.1
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 1.4e-17 94.0 106 48.1
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 3.1e-17 92.8 132 41.7
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 9.1e-17 91.3 153 37.9
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 7.2e-14 81.6 135 35.6
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 6.8e-12 75.1 149 33.6
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 8.3e-10 68.2 48 62.5
Zm00001eb177740 Zea mays HOM05D002799 ORTHO05D008889 2.5e-06 56.6 43 60.5


User provided reference genes

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