Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002228g0040 Nicotiana tabacum HOM05D011410 ORTHO05D013015 8.9e-99 363.6 185 100.0
Nitab4.5_0000360g0070 Nicotiana tabacum HOM05D011410 ORTHO05D013015 4.8e-52 208.4 115 89.6
Peaxi162Scf00089g01410 Petunia axillaris HOM05D011410 ORTHO05D013015 2.3e-38 162.9 172 50.6
CAN.G111.34 Capsicum annuum HOM05D011410 ORTHO05D013015 1.5e-37 160.2 183 49.2
CAN.G111.37 Capsicum annuum HOM05D011410 ORTHO05D013015 4.7e-31 138.7 172 46.5
CAN.G111.41 Capsicum annuum HOM05D011410 ORTHO05D013015 4.4e-29 132.1 171 45.6
Solyc01g097660.2 Solanum lycopersicum HOM05D011410 ORTHO05D013015 7.4e-29 131.3 170 45.3
Sopen01g041270 Solanum pennellii HOM05D011410 ORTHO05D013015 7.4e-29 131.3 170 45.3
Nitab4.5_0000070g0260 Nicotiana tabacum HOM05D011410 ORTHO05D013015 9.7e-29 131.0 169 45.0
PGSC0003DMG400009677 Solanum tuberosum HOM05D011410 ORTHO05D013015 8.2e-28 127.9 161 46.6
CAN.G111.35 Capsicum annuum HOM05D011410 ORTHO05D013015 1.8e-27 126.7 168 44.6
Solyc06g005460.1 Solanum lycopersicum HOM05D011410 ORTHO05D013015 5.3e-27 125.2 170 45.3
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 1.6e-23 113.6 163 36.2
CAN.G111.36 Capsicum annuum HOM05D011410 ORTHO05D013015 4.7e-23 112.1 138 43.5
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 5.5e-16 88.6 158 34.2
Migut.K00088 Erythranthe guttata HOM05D011410 ORTHO05D013015 8.0e-15 84.7 144 29.9
Migut.I00083 Erythranthe guttata HOM05D011410 ORTHO05D013015 5.2e-14 82.0 142 36.6
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 4.8e-12 75.5 179 28.5
Migut.I00086 Erythranthe guttata HOM05D062370 ORTHO05D001819 1.1e-11 74.3 157 31.2
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 5.9e-10 68.6 141 27.7
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 5.9e-10 68.6 164 29.9
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-09 67.4 166 25.3
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 2.3e-09 66.6 173 28.9
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 2.3e-09 66.6 164 28.7
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 2.9e-09 66.2 166 25.9
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.9e-09 66.2 154 29.2
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-09 65.5 166 24.7
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 5.0e-09 65.5 182 31.3
Migut.H01141 Erythranthe guttata HOM05D060608 ORTHO05D001819 5.0e-09 65.5 155 26.5
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 5.0e-09 65.5 143 29.4
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 8.6e-09 64.7 140 28.6
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 1.1e-08 64.3 142 28.9
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-08 64.3 169 23.7
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-08 63.9 166 24.1
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 2.5e-08 63.2 148 28.4
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-08 63.2 133 27.8
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.5e-08 63.2 168 25.0
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 3.2e-08 62.8 171 33.3
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.2e-08 62.4 141 26.2
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.2e-08 62.4 141 26.2
Cpa.g.sc52.69 Carica papaya HOM05D001445 ORTHO05D001261 5.5e-08 62.0 144 29.9
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.5e-08 62.0 163 25.8
Oeu063130.1 Olea europaea HOM05D009438 ORTHO05D010870 5.5e-08 62.0 157 24.8
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.2e-08 61.6 166 25.9
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 9.5e-08 61.2 144 28.5
Oeu063135.1 Olea europaea HOM05D009438 ORTHO05D010870 1.2e-07 60.8 171 23.4
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 25.3
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 162 26.5
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 2.1e-07 60.1 163 27.0
Oeu063131.1 Olea europaea HOM05D009438 ORTHO05D010870 2.1e-07 60.1 163 22.7
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.8e-07 59.7 166 25.3
Lalb_Chr16g0386271 Lupinus albus HOM05D007995 ORTHO05D001819 4.7e-07 58.9 178 29.2
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 4.7e-07 58.9 129 28.7
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 6.1e-07 58.5 161 26.1
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.1e-07 58.5 166 23.5
Oeu063127.1 Olea europaea HOM05D009438 ORTHO05D010870 6.1e-07 58.5 171 22.2
Oeu063129.1 Olea europaea HOM05D009438 ORTHO05D010870 6.1e-07 58.5 171 21.6
Rhsim04G0235700 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.1e-07 58.5 153 29.4
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 8.0e-07 58.2 149 28.9
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.0e-07 58.2 170 26.5
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-06 57.8 166 22.9
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.0e-06 57.8 137 29.2
CDE07G1929 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 1.4e-06 57.4 138 26.1
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 1.4e-06 57.4 134 26.1
RcHm_v2.0_Chr1g0344031 Rosa chinensis HOM05D001445 ORTHO05D001261 1.4e-06 57.4 166 27.1
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-06 57.0 165 24.8
Oeu063123.1 Olea europaea HOM05D009438 ORTHO05D010870 1.8e-06 57.0 171 21.6
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.3e-06 56.6 144 24.3
Oeu063128.1 Olea europaea HOM05D009438 ORTHO05D010870 2.3e-06 56.6 171 21.1
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 3.0e-06 56.2 105 29.5
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 3.0e-06 56.2 166 25.9
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 3.0e-06 56.2 129 29.5
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-06 55.8 170 25.9
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-06 55.8 162 25.9
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.2e-06 55.5 166 23.5
Prupe.3G007900 Prunus persica HOM05D001445 ORTHO05D001207 5.2e-06 55.5 167 24.0
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 5.2e-06 55.5 159 28.3
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.8e-06 55.1 170 25.9
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 6.8e-06 55.1 163 27.0
Rhsim07G0137900 Rhododendron simsii HOM05D009438 ORTHO05D010870 6.8e-06 55.1 177 24.9
CDE10G0993 Ceratophyllum demersum HOM05D022876 ORTHO05D024919 8.8e-06 54.7 183 25.7
Migut.I00087 Erythranthe guttata HOM05D062370 ORTHO05D001819 8.8e-06 54.7 96 32.3


User provided reference genes

Program Settings