Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002224g0010 Nicotiana tabacum HOM05D002092 ORTHO05D036550 1.3e-93 346.3 163 100.0
Nitab4.5_0004186g0030 Nicotiana tabacum HOM05D002092 ORTHO05D005410 1.9e-73 279.3 164 83.5
Nitab4.5_0002224g0020 Nicotiana tabacum HOM05D002092 ORTHO05D005410 1.3e-72 276.6 187 74.9
Solyc04g080430.3 Solanum lycopersicum HOM05D002092 ORTHO05D005410 9.7e-57 223.8 161 72.0
Sopen04g034010 Solanum pennellii HOM05D002092 ORTHO05D005410 1.4e-55 219.9 161 71.4
CAN.G1226.21 Capsicum annuum HOM05D002092 ORTHO05D005410 1.5e-54 216.5 161 69.6
Dinv36086 Davidia involucrata HOM05D002092 ORTHO05D005410 1.0e-45 187.2 167 59.3
Peaxi162Scf00931g00119 Petunia axillaris HOM05D002092 ORTHO05D005410 1.7e-45 186.4 184 56.0
CSS0040518 Camellia sinensis var. sinensis HOM05D002092 ORTHO05D005410 1.3e-40 170.2 163 57.1
PGSC0003DMG400003681 Solanum tuberosum HOM05D002092 ORTHO05D005410 1.7e-40 169.9 95 83.2
FvH4_2g39770 Fragaria vesca HOM05D002092 ORTHO05D005410 2.2e-40 169.5 164 54.3
Prupe.1G379000 Prunus persica HOM05D002092 ORTHO05D005410 6.3e-40 167.9 165 53.9
RcHm_v2.0_Chr6g0301091 Rosa chinensis HOM05D002092 ORTHO05D005410 6.3e-40 167.9 165 53.9
Cc10_g02830 Coffea canephora HOM05D002092 ORTHO05D005410 8.3e-40 167.5 176 57.4
FAN15G1126 Fragaria x ananassa HOM05D002092 ORTHO05D005410 7.0e-39 164.5 165 52.7
FAN27G0602 Fragaria x ananassa HOM05D002092 ORTHO05D005410 9.1e-39 164.1 166 53.6
Hma1.2p1_0203F.1_g086340 Hydrangea macrophylla HOM05D002092 ORTHO05D005410 1.6e-38 163.3 167 54.5
Duzib093G2094 Durio zibethinus HOM05D002092 ORTHO05D005410 2.0e-38 162.9 164 51.8
Cfa018155 Carpinus fangiana HOM05D002092 ORTHO05D005410 2.7e-38 162.5 166 53.6
Gorai.010G010200 Gossypium raimondii HOM05D002092 ORTHO05D005410 1.3e-37 160.2 164 50.6
Haze_17963 Corylus avellana HOM05D002092 ORTHO05D005410 2.2e-37 159.5 166 52.4
Thecc.08G027200 Theobroma cacao HOM05D002092 ORTHO05D005410 6.5e-37 157.9 163 52.1
Aqoxy5G01636 Aquilegia oxysepala HOM05D002092 ORTHO05D005410 8.5e-37 157.5 159 52.2
MD08G1031400 Malus domestica HOM05D002092 ORTHO05D005410 1.9e-36 156.4 164 50.0
MD15G1027200 Malus domestica HOM05D002092 ORTHO05D005410 3.2e-36 155.6 157 51.6
PGR031G1345 Punica granatum HOM05D002092 ORTHO05D005410 1.4e-34 150.2 164 51.8
TWI12G1471 Tripterygium wilfordii HOM05D002092 ORTHO05D005410 1.4e-34 150.2 160 51.2
CANSAT25G0183 Cannabis sativa HOM05D002092 ORTHO05D005410 1.8e-34 149.8 166 52.4
Sc15g0006940 Simmondsia chinensis HOM05D002092 ORTHO05D005410 1.8e-34 149.8 163 51.5
Sabra14G0145500 Salix brachista HOM05D002092 ORTHO05D005410 3.0e-34 149.1 162 52.5
vmacro04530 Vaccinium macrocarpon HOM05D002092 ORTHO05D005410 3.0e-34 149.1 93 73.1
EL10Ac1g01756 Beta vulgaris HOM05D002092 ORTHO05D005410 6.8e-34 147.9 163 51.5
TAR628G1066 Trochodendron aralioides HOM05D002092 ORTHO05D005410 6.8e-34 147.9 165 50.9
Nn5g29609 Nelumbo nucifera HOM05D002092 ORTHO05D005410 1.5e-33 146.7 166 51.2
Atru.chr13.465 Acer truncatum HOM05D002092 ORTHO05D005410 2.0e-33 146.4 91 71.4
Phvul.009G058000 Phaseolus vulgaris HOM05D002092 ORTHO05D005410 2.0e-33 146.4 160 50.6
Oeu007019.3 Olea europaea HOM05D002092 ORTHO05D005410 2.6e-33 146.0 92 75.0
AUR62038819 Chenopodium quinoa HOM05D002092 ORTHO05D005410 4.4e-33 145.2 168 51.8
FAN20G1956 Fragaria x ananassa HOM05D002092 ORTHO05D005410 4.4e-33 145.2 92 70.7
Hund26570 Selenicereus undatus HOM05D002092 ORTHO05D005410 5.7e-33 144.8 168 50.6
MSTRG.1275 Avicennia marina HOM05D002092 ORTHO05D005410 9.8e-33 144.1 164 50.6
Nn1g04982 Nelumbo nucifera HOM05D002092 ORTHO05D005410 9.8e-33 144.1 162 51.9
Gohir.D06G007500 Gossypium hirsutum HOM05D002092 ORTHO05D005410 2.8e-32 142.5 79 81.0
Ciclev10000800m.g Citrus clementina HOM05D002092 ORTHO05D005410 3.7e-32 142.1 95 68.4
GSVIVG01009713001 Vitis vinifera HOM05D002092 ORTHO05D005410 3.7e-32 142.1 92 72.8
Actinidia29822 Actinidia chinensis HOM05D002092 ORTHO05D005410 4.8e-32 141.7 93 69.9
COL.COLO4_26310 Corchorus olitorius HOM05D002092 ORTHO05D005410 6.3e-32 141.4 77 81.8
Eucgr.F01892 Eucalyptus grandis HOM05D002092 ORTHO05D005410 6.3e-32 141.4 164 49.4
QL02p008697 Quercus lobata HOM05D002092 ORTHO05D005410 8.3e-32 141.0 168 50.6
TAR376G0025 Trochodendron aralioides HOM05D002092 ORTHO05D005410 1.1e-31 140.6 180 47.2
CsaV3_2G028720 Cucumis sativus L. HOM05D002092 ORTHO05D005410 1.4e-31 140.2 166 52.4
Duzib116G0196 Durio zibethinus HOM05D002092 ORTHO05D005410 1.4e-31 140.2 78 79.5
Glyma.06G031900 Glycine max HOM05D002092 ORTHO05D005410 1.4e-31 140.2 157 49.7
Rhsim07G0239800 Rhododendron simsii HOM05D002092 ORTHO05D005410 1.4e-31 140.2 93 69.9
Ca_15513_v3 Cicer arietinum L. HOM05D002092 ORTHO05D005410 1.8e-31 139.8 161 54.0
Oeu063755.1 Olea europaea HOM05D002092 ORTHO05D005410 1.8e-31 139.8 95 70.5
arahy.Tifrunner.gnm1.ann1.YL0Q9N Arachis hypogaea HOM05D002092 ORTHO05D005410 2.4e-31 139.4 159 50.3
Gohir.A05G193700 Gossypium hirsutum HOM05D002092 ORTHO05D005410 2.4e-31 139.4 90 73.3
Gohir.A06G010100 Gossypium hirsutum HOM05D002092 ORTHO05D005410 2.4e-31 139.4 79 79.7
Lj1g0019872 Lotus japonicus HOM05D002092 ORTHO05D005410 2.4e-31 139.4 158 51.3
Gohir.D05G196900 Gossypium hirsutum HOM05D002092 ORTHO05D005410 4.1e-31 138.7 90 73.3
Psat5g017080 Pisum sativum HOM05D002092 ORTHO05D005410 4.1e-31 138.7 159 51.6
arahy.Tifrunner.gnm1.ann1.80GNXC Arachis hypogaea HOM05D002092 ORTHO05D005410 5.4e-31 138.3 159 49.7
SGA_v2.0_scaffold54G19516 Striga asiatica HOM05D002092 ORTHO05D005410 5.4e-31 138.3 163 51.5
Cpa.g.sc36.81 Carica papaya HOM05D002092 ORTHO05D005410 7.0e-31 137.9 82 75.6
Migut.C00738 Erythranthe guttata HOM05D002092 ORTHO05D005410 9.1e-31 137.5 166 52.4
VMungo1309G2350 Vigna mungo HOM05D002092 ORTHO05D005410 1.2e-30 137.1 157 49.0
Gorai.009G201800 Gossypium raimondii HOM05D002092 ORTHO05D005410 1.6e-30 136.7 90 73.3
MELO3C010944.2 Cucumis melo HOM05D002092 ORTHO05D005410 2.0e-30 136.3 103 67.0
MBI16_g28726_MAGBIO Magnolia biondii HOM05D002092 ORTHO05D005410 2.0e-30 136.3 95 68.4
MBI16_g31223_MAGBIO Magnolia biondii HOM05D002092 ORTHO05D036550 2.0e-30 136.3 95 68.4
SalBow7G2615 Salvia bowleyana HOM05D002092 ORTHO05D005410 3.5e-30 135.6 90 67.8
Manes.05G159400 Manihot esculenta HOM05D002092 ORTHO05D005410 7.7e-30 134.4 96 65.6
Sed0009494 Sechium edule HOM05D002092 ORTHO05D005410 7.7e-30 134.4 166 48.8
Sed0014237 Sechium edule HOM05D002092 ORTHO05D005410 7.7e-30 134.4 158 49.4
Manes.18G026700 Manihot esculenta HOM05D002092 ORTHO05D005410 1.3e-29 133.7 90 66.7
TPR.G12478 Trifolium pratense HOM05D002092 ORTHO05D005410 1.7e-29 133.3 161 52.2
DCAR_013820 Daucus carota HOM05D002092 ORTHO05D005410 2.9e-29 132.5 79 75.9
ECA246G1239 Erigeron canadensis HOM05D002092 ORTHO05D005410 3.8e-29 132.1 89 67.4
ClCG08G015070 Citrullus lanatus HOM05D002092 ORTHO05D005410 5.0e-29 131.7 164 50.6
Glyma.04G031800 Glycine max HOM05D002092 ORTHO05D005410 6.6e-29 131.3 90 64.4
Lsat_1_v5_gn_5_27540 Lactuca sativa HOM05D002092 ORTHO05D005410 8.6e-29 131.0 159 46.5
SEGI_27952 Sequoiadendron giganteum HOM05D002092 ORTHO05D005410 8.6e-29 131.0 159 45.9
AUR62043706 Chenopodium quinoa HOM05D002092 ORTHO05D005410 1.1e-28 130.6 113 58.4
BcaB02g07016 Brassica carinata HOM05D002092 ORTHO05D005410 3.3e-28 129.0 166 47.6
Potri.014G196700 Populus trichocarpa HOM05D002092 ORTHO05D005410 3.3e-28 129.0 106 60.4
CiPaw.16G058900 Carya illinoinensis HOM05D002092 ORTHO05D005410 4.2e-28 128.6 77 75.3
HanXRQChr05g0153601 Helianthus annuus HOM05D002092 ORTHO05D005410 9.5e-28 127.5 83 69.9
A07p28960 Brassica napus HOM05D002092 ORTHO05D005410 1.6e-27 126.7 162 47.5
BcaC08g45591 Brassica carinata HOM05D002092 ORTHO05D005410 2.1e-27 126.3 162 47.5
AL2G35120 Arabidopsis lyrata HOM05D002092 ORTHO05D005410 3.6e-27 125.6 70 82.9
C06p32730 Brassica napus HOM05D002092 ORTHO05D005410 3.6e-27 125.6 162 46.9
Thhalv10018265m.g Eutrema salsugineum HOM05D002092 ORTHO05D005410 3.6e-27 125.6 163 45.4
THA.LOC104813834 Tarenaya hassleriana HOM05D002092 ORTHO05D005410 4.7e-27 125.2 178 44.9
AT1G75210 Arabidopsis thaliana HOM05D002092 ORTHO05D005410 8.0e-27 124.4 70 81.4
Lalb_Chr11g0062311 Lupinus albus HOM05D002092 ORTHO05D005410 1.0e-26 124.0 80 71.2
PSO210G7256 Papaver somniferum HOM05D002092 ORTHO05D005410 1.0e-26 124.0 159 48.4
CDE01G0519 Ceratophyllum demersum HOM05D002092 ORTHO05D005410 2.3e-26 122.9 91 64.8
Medtr3g111870 Medicago truncatula HOM05D002092 ORTHO05D005410 2.3e-26 122.9 78 73.1
BolC6t38397H Brassica oleracea HOM05D002092 ORTHO05D005410 3.0e-26 122.5 70 80.0
BraA07t30538Z Brassica rapa HOM05D002092 ORTHO05D005410 3.0e-26 122.5 70 80.0
CARHR068540 Cardamine hirsuta HOM05D002092 ORTHO05D005410 3.0e-26 122.5 70 80.0
unitig_749.g13848 Utricularia gibba HOM05D002092 ORTHO05D005410 5.2e-26 121.7 82 70.7
C06p49190 Brassica napus HOM05D002092 ORTHO05D005410 6.8e-26 121.3 93 62.4
Sp5g30370 Schrenkiella parvula HOM05D002092 ORTHO05D005410 6.8e-26 121.3 70 78.6
ATR0733G055 Amborella trichopoda HOM05D002092 ORTHO05D005410 8.9e-26 120.9 88 64.8
Carub.0002s2203 Capsella rubella HOM05D002092 ORTHO05D005410 1.2e-25 120.6 70 80.0
unitig_26.g9835 Utricularia gibba HOM05D002092 ORTHO05D005410 1.5e-25 120.2 86 66.3
PGR083G1162 Punica granatum HOM05D002092 ORTHO05D005410 2.0e-25 119.8 86 68.6
BolC6t39952H Brassica oleracea HOM05D002092 ORTHO05D005410 2.6e-25 119.4 93 61.3
PSO731G0029 Papaver somniferum HOM05D002092 ORTHO05D005410 2.6e-25 119.4 86 66.3
Lsat_1_v5_gn_1_18740 Lactuca sativa HOM05D002092 ORTHO05D005410 4.4e-25 118.6 93 61.3
A07p40800 Brassica napus HOM05D002092 ORTHO05D005410 5.7e-25 118.2 70 78.6
BraA07t31622Z Brassica rapa HOM05D002092 ORTHO05D005410 5.7e-25 118.2 70 78.6
Lalb_Chr08g0245871 Lupinus albus HOM05D002092 ORTHO05D005410 7.5e-25 117.9 74 74.3
ECA247G0066 Erigeron canadensis HOM05D002092 ORTHO05D005410 8.3e-24 114.4 85 58.8
HanXRQChr02g0039761 Helianthus annuus HOM05D002092 ORTHO05D005410 3.2e-23 112.5 80 66.2
Medtr1g022260 Medicago truncatula HOM05D002092 ORTHO05D005410 2.7e-22 109.4 90 60.0
Glyma.17G250700 Glycine max HOM05D002092 ORTHO05D005410 7.8e-22 107.8 67 77.6
SHI08155 Sapria himalayana HOM05D002092 ORTHO05D005410 1.3e-21 107.1 77 64.9
Aa31LG4G5430 Aethionema arabicum HOM05D002092 ORTHO05D005410 2.3e-21 106.3 66 77.3
SMO356G0200 Selaginella moellendorffii HOM05D002092 ORTHO05D005410 3.9e-21 105.5 68 69.1
Lj4C786T3 Lonicera japonica HOM05D002092 ORTHO05D005410 8.6e-21 104.4 57 84.2
Ca_13372_v3 Cicer arietinum L. HOM05D002092 ORTHO05D005410 1.1e-20 104.0 67 71.6
Os03g0774300 Oryza sativa ssp. japonica HOM05D002092 ORTHO05D005410 1.1e-20 104.0 70 68.6
HanXRQChr04g0105681 Helianthus annuus HOM05D002092 ORTHO05D005410 1.5e-20 103.6 69 72.5
HanXRQChr04g0105691 Helianthus annuus HOM05D002092 ORTHO05D005410 1.5e-20 103.6 69 72.5
TPR.G20153 Trifolium pratense HOM05D002092 ORTHO05D005410 1.5e-20 103.6 67 71.6
Mapoly0091s0018 Marchantia polymorpha HOM05D002092 ORTHO05D005410 1.9e-20 103.2 126 45.2
Zm00001eb059100 Zea mays HOM05D002092 ORTHO05D005410 2.5e-20 102.8 70 67.1
Pp3c1_23010 Physcomitrium patens HOM05D002092 ORTHO05D005410 4.3e-20 102.1 93 57.0
AagrBONN_evm.TU.Sc2ySwM_368.399 Anthoceros agrestis HOM05D002092 ORTHO05D005410 7.3e-20 101.3 59 76.3
Pp3c14_2770 Physcomitrium patens HOM05D002092 ORTHO05D005410 7.3e-20 101.3 69 68.1
Psat6g008960 Pisum sativum HOM05D002092 ORTHO05D005410 4.7e-19 98.6 58 77.6
CBR_g4376 Chara braunii HOM05D002092 ORTHO05D005410 6.1e-19 98.2 73 63.0
Psat2g033440 Pisum sativum HOM05D002092 ORTHO05D005410 5.8e-17 91.7 66 66.7
Medtr5g082530 Medicago truncatula HOM05D002092 ORTHO05D005410 1.7e-16 90.1 58 70.7
HPP92_017751 Vanilla planifolia HOM05D002092 ORTHO05D005410 6.4e-16 88.2 93 49.5
SMO364G0546 Selaginella moellendorffii HOM05D002092 ORTHO05D005410 1.1e-15 87.4 54 68.5
Ca_05955_v3 Cicer arietinum L. HOM05D002092 ORTHO05D005410 1.9e-15 86.7 79 55.7
CiPaw.15G078600 Carya illinoinensis HOM05D002092 ORTHO05D005410 7.0e-15 84.7 45 84.4
Cre10.g456900 Chlamydomonas reinhardtii HOM05D002092 ORTHO05D005410 1.0e-13 80.9 61 57.4
Haze_26941 Corylus avellana HOM05D002092 ORTHO05D005410 2.0e-09 66.6 59 52.5
MCO02G255 Micromonas commoda HOM05D002092 ORTHO05D005410 1.7e-08 63.5 50 64.0
PRCOL_00001743 Prasinoderma coloniale HOM05D002092 ORTHO05D005410 3.2e-07 59.3 45 57.8
Mapoly0044s0089 Marchantia polymorpha HOM05D002092 ORTHO05D007041 7.8e-06 54.7 119 30.3


User provided reference genes

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