Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.6e-91 339.3 160 100.0
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.2e-68 261.9 159 74.2
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 5.4e-68 261.2 159 74.2
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 7.5e-62 240.7 157 69.4
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-60 236.1 161 64.0
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 1.2e-59 233.4 159 64.8
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 5.1e-58 228.0 159 62.9
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 5.6e-57 224.6 159 65.4
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.6e-56 223.0 162 61.7
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-55 220.3 159 62.3
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.4e-55 219.9 162 63.6
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 6.8e-55 217.6 159 60.4
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 8.9e-55 217.2 160 60.6
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 8.9e-55 217.2 159 61.6
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.8e-54 214.5 159 61.6
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 5.8e-54 214.5 159 61.0
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.9e-54 213.8 159 61.6
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 1.3e-53 213.4 159 61.0
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-53 213.4 162 61.7
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 1.7e-53 213.0 153 62.7
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.7e-53 213.0 159 60.4
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.7e-53 213.0 159 60.4
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.4e-52 209.1 159 59.1
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.1e-52 207.6 160 57.5
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.2e-51 206.8 157 61.1
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 2.1e-51 206.1 159 57.9
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.8e-51 204.1 159 61.0
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-49 199.9 140 65.7
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.8e-47 191.0 161 54.0
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 4.6e-43 178.3 137 59.9
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 1.3e-42 176.8 167 50.9
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 5.1e-42 174.9 160 51.9
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.3e-41 172.2 130 59.2
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 7.3e-41 171.0 162 52.5
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 9.6e-41 170.6 164 46.3
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.8e-40 169.1 112 67.0
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 2.0e-38 162.9 148 52.7
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.2e-36 155.2 103 67.0
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 9.3e-36 154.1 123 58.5
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 5.1e-34 148.3 164 44.5
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 6.6e-34 147.9 129 53.5
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.5e-33 146.7 166 44.0
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-33 146.4 127 55.1
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 4.3e-33 145.2 156 42.3
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.3e-28 127.5 111 54.1
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 1.2e-27 127.1 142 44.4
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 2.1e-27 126.3 160 45.0
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-25 119.8 114 49.1
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 3.7e-24 115.5 193 36.8
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 1.1e-23 114.0 70 71.4
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 6.9e-23 111.3 159 37.7
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 9.0e-23 110.9 156 40.4
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.6e-22 109.4 186 37.6
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 7.6e-22 107.8 128 44.5
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 1.3e-21 107.1 145 41.4
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.9e-21 105.1 161 35.4
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 8.4e-21 104.4 70 70.0
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 1.4e-20 103.6 143 40.6
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-20 101.3 136 41.9
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.7e-19 99.4 109 46.8
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.7e-19 99.4 161 34.2
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.0e-19 98.2 114 45.6
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 6.0e-19 98.2 159 39.0
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 5.1e-18 95.1 113 44.2
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-17 94.0 116 40.5
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 3.7e-16 89.0 84 53.6
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.8e-16 88.6 70 62.9
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 2.4e-15 86.3 153 37.3
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 2.0e-14 83.2 111 39.6
Solyc10g051210.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.4e-13 77.8 115 39.1
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.4e-12 77.0 163 35.0
FAN06G2767 Fragaria x ananassa HOM05D008174 ORTHO05D010206 1.3e-10 70.5 151 29.8
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 2.3e-10 69.7 123 35.8
CSS0035206 Camellia sinensis var. sinensis HOM05D001713 ORTHO05D001669 6.7e-10 68.2 160 33.1
PSO210G6916 Papaver somniferum HOM05D001713 ORTHO05D001669 1.1e-09 67.4 157 31.2
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-09 67.4 79 46.8
QL02p074910 Quercus lobata HOM05D001713 ORTHO05D001669 4.3e-09 65.5 111 34.2
QL02p075024 Quercus lobata HOM05D001713 ORTHO05D001669 4.3e-09 65.5 111 34.2
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 7.4e-09 64.7 37 67.6
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.3e-08 63.9 83 39.8
QL02p074896 Quercus lobata HOM05D001713 ORTHO05D001669 3.7e-08 62.4 115 33.0
QL02p075014 Quercus lobata HOM05D001713 ORTHO05D001669 3.7e-08 62.4 115 33.0
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 8.2e-08 61.2 64 50.0
Haze_08779 Corylus avellana HOM05D000141 ORTHO05D001860 1.8e-07 60.1 116 34.5
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 2.4e-07 59.7 151 29.8
PSO832G0642 Papaver somniferum HOM05D001713 ORTHO05D001669 1.2e-06 57.4 144 30.6
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.4e-06 55.8 116 31.0
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.4e-06 55.8 116 31.0
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.4e-06 55.8 116 31.0


User provided reference genes

Program Settings