Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002219g0050 Nicotiana tabacum HOM05D005633 ORTHO05D007003 0.0e+00 1323.9 664 100.0
Nitab4.5_0016285g0010 Nicotiana tabacum HOM05D005633 ORTHO05D007003 0.0e+00 1167.1 756 81.9
PGSC0003DMG400029731 Solanum tuberosum HOM05D005633 ORTHO05D007003 0.0e+00 1092.8 768 75.4
Sopen02g022750 Solanum pennellii HOM05D005633 ORTHO05D007003 0.0e+00 1092.0 756 76.1
Solyc02g077900.4 Solanum lycopersicum HOM05D005633 ORTHO05D007003 0.0e+00 1088.2 756 75.9
CAN.G529.25 Capsicum annuum HOM05D005633 ORTHO05D007003 0.0e+00 1083.6 758 75.9
Peaxi162Scf01100g00118 Petunia axillaris HOM05D005633 ORTHO05D007003 9.4e-284 979.9 731 71.5
Cc02_g13630 Coffea canephora HOM05D005633 ORTHO05D007003 6.5e-208 728.0 761 53.6
Rhsim02G0132600 Rhododendron simsii HOM05D005633 ORTHO05D007003 6.0e-206 721.5 731 52.8
Oeu029366.1 Olea europaea HOM05D005633 ORTHO05D007003 1.1e-199 700.7 755 51.9
Lj2C290G9 Lonicera japonica HOM05D005633 ORTHO05D007003 5.5e-199 698.4 737 52.2
Potri.004G046900 Populus trichocarpa HOM05D005633 ORTHO05D007003 2.5e-196 689.5 762 51.8
Cfa000508 Carpinus fangiana HOM05D005633 ORTHO05D007003 1.8e-194 683.3 759 50.7
Potri.011G056100 Populus trichocarpa HOM05D005633 ORTHO05D007003 3.4e-193 679.1 762 50.5
Manes.17G047800 Manihot esculenta HOM05D005633 ORTHO05D007003 1.0e-192 677.6 761 49.4
Sabra04G0029300 Salix brachista HOM05D005633 ORTHO05D007003 1.0e-192 677.6 761 51.4
Hma1.2p1_0208F.1_g088350 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.4e-191 673.7 760 51.3
QL05p041669 Quercus lobata HOM05D005633 ORTHO05D007003 1.4e-189 667.2 764 49.6
Duzib235G0140 Durio zibethinus HOM05D005633 ORTHO05D007003 2.5e-188 662.9 759 50.3
CiPaw.09G062100 Carya illinoinensis HOM05D005633 ORTHO05D007003 8.2e-187 657.9 756 49.6
Migut.M01122 Erythranthe guttata HOM05D005633 ORTHO05D007003 1.1e-186 657.5 754 50.3
SalBow8G0351 Salvia bowleyana HOM05D005633 ORTHO05D007003 1.3e-184 650.6 780 49.0
DCAR_004057 Daucus carota HOM05D005633 ORTHO05D007003 6.5e-184 648.3 760 48.9
Actinidia07591 Actinidia chinensis HOM05D005633 ORTHO05D007003 8.5e-184 647.9 704 51.6
FAN11G1234 Fragaria x ananassa HOM05D005633 ORTHO05D007003 8.5e-184 647.9 749 50.2
FvH4_3g08860 Fragaria vesca HOM05D005633 ORTHO05D007003 1.4e-183 647.1 749 49.8
TAR629G0889 Trochodendron aralioides HOM05D005633 ORTHO05D007003 5.5e-183 645.2 775 48.8
FAN21G3099 Fragaria x ananassa HOM05D005633 ORTHO05D007003 2.1e-182 643.3 749 49.5
Thecc.06G183700 Theobroma cacao HOM05D005633 ORTHO05D007003 2.3e-181 639.8 763 49.4
FAN25G1993 Fragaria x ananassa HOM05D005633 ORTHO05D007003 5.1e-181 638.6 749 49.1
Gohir.A06G129500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 1.1e-180 637.5 761 48.9
GSVIVG01021090001 Vitis vinifera HOM05D005633 ORTHO05D007003 1.5e-180 637.1 763 49.1
MD10G1291600 Malus domestica HOM05D005633 ORTHO05D007003 4.4e-180 635.6 750 48.4
Gorai.010G155400 Gossypium raimondii HOM05D005633 ORTHO05D007003 1.3e-179 634.0 759 48.5
Sabra11G0038100 Salix brachista HOM05D005633 ORTHO05D007003 2.8e-179 632.9 796 46.6
CANSAT35G1988 Cannabis sativa HOM05D005633 ORTHO05D007003 6.3e-179 631.7 756 48.1
Dinv17333 Davidia involucrata HOM05D005633 ORTHO05D007003 4.5e-177 625.5 748 48.8
TWI63G0225 Tripterygium wilfordii HOM05D005633 ORTHO05D007003 3.8e-176 622.5 756 47.8
Gohir.D06G133500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 5.0e-176 622.1 757 48.2
Atru.chr10.1839_Atru.chr10.1840 Acer truncatum HOM05D005633 ORTHO05D007003 1.5e-175 620.5 764 47.6
COL.COLO4_31438 Corchorus olitorius HOM05D005633 ORTHO05D007003 1.6e-174 617.1 815 46.6
Medtr2g014210 Medicago truncatula HOM05D005633 ORTHO05D007003 1.8e-173 613.6 748 47.2
Nn1g04161 Nelumbo nucifera HOM05D005633 ORTHO05D007003 6.7e-173 611.7 741 48.0
PSO675G0497 Papaver somniferum HOM05D005633 ORTHO05D007003 9.1e-170 601.3 774 46.4
Psat1g203720 Pisum sativum HOM05D005633 ORTHO05D007003 1.7e-168 597.0 756 47.0
Phvul.006G183800 Phaseolus vulgaris HOM05D005633 ORTHO05D007003 2.2e-168 596.7 749 47.9
HanXRQChr01g0004651 Helianthus annuus HOM05D005633 ORTHO05D007003 6.5e-168 595.1 735 47.2
Ca_00349_v3 Cicer arietinum L. HOM05D005633 ORTHO05D007003 8.5e-168 594.7 750 46.5
Atru.chr10.1822_Atru.chr10.1823 Acer truncatum HOM05D005633 ORTHO05D007003 1.1e-167 594.3 713 48.2
TPR.G16498 Trifolium pratense HOM05D005633 ORTHO05D007003 2.5e-167 593.2 749 45.8
VMungo0540G1564 Vigna mungo HOM05D005633 ORTHO05D007003 3.2e-167 592.8 696 50.4
Glyma.13G237200 Glycine max HOM05D005633 ORTHO05D007003 4.7e-166 589.0 755 46.9
ECA248G0126 Erigeron canadensis HOM05D005633 ORTHO05D007003 1.8e-165 587.0 747 45.0
Lj6g0019345 Lotus japonicus HOM05D005633 ORTHO05D007003 6.8e-165 585.1 750 44.8
Lalb_Chr18g0059461 Lupinus albus HOM05D005633 ORTHO05D007003 2.6e-164 583.2 752 46.1
arahy.Tifrunner.gnm1.ann1.QNV263 Arachis hypogaea HOM05D005633 ORTHO05D007003 5.7e-164 582.0 750 46.7
CARHR027810 Cardamine hirsuta HOM05D005633 ORTHO05D007003 5.7e-164 582.0 743 45.6
Sed0020009 Sechium edule HOM05D005633 ORTHO05D007003 2.4e-162 576.6 760 43.7
FAN16G2481 Fragaria x ananassa HOM05D005633 ORTHO05D007003 3.1e-162 576.2 748 46.4
AT1G28320 Arabidopsis thaliana HOM05D005633 ORTHO05D007003 1.2e-161 574.3 746 44.9
arahy.Tifrunner.gnm1.ann1.U0Q0B6 Arachis hypogaea HOM05D005633 ORTHO05D007003 2.0e-161 573.5 732 46.7
Sc05g0007520 Simmondsia chinensis HOM05D005633 ORTHO05D007003 2.2e-160 570.1 745 44.6
Carub.0001s2677 Capsella rubella HOM05D005633 ORTHO05D007003 3.8e-160 569.3 737 45.0
AUR62014850 Chenopodium quinoa HOM05D005633 ORTHO05D007003 5.0e-160 568.9 750 43.6
AL1G41900 Arabidopsis lyrata HOM05D005633 ORTHO05D007003 4.2e-159 565.8 745 43.9
EL10Ac8g20419 Beta vulgaris HOM05D005633 ORTHO05D007003 4.2e-159 565.8 763 43.6
Sp1g24540 Schrenkiella parvula HOM05D005633 ORTHO05D007003 9.4e-159 564.7 747 44.3
CsaV3_6G050250 Cucumis sativus L. HOM05D005633 ORTHO05D007003 2.7e-158 563.1 763 44.0
SGA_v2.0_scaffold100G29699 Striga asiatica HOM05D005633 ORTHO05D007003 3.6e-158 562.8 753 44.6
Actinidia26133 Actinidia chinensis HOM05D005633 ORTHO05D007003 6.1e-158 562.0 655 49.8
Lsat_1_v5_gn_1_124421 Lactuca sativa HOM05D005633 ORTHO05D007003 1.0e-157 561.2 741 45.9
ClCG01G023110 Citrullus lanatus HOM05D005633 ORTHO05D007003 2.3e-157 560.1 769 45.1
Thhalv10006942m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 2.3e-157 560.1 733 45.0
AUR62017045 Chenopodium quinoa HOM05D005633 ORTHO05D007003 1.2e-156 557.8 704 45.5
Aqoxy1G02351 Aquilegia oxysepala HOM05D005633 ORTHO05D007003 3.4e-156 556.2 768 45.6
THA.LOC104820553 Tarenaya hassleriana HOM05D005633 ORTHO05D007003 4.4e-156 555.8 762 43.8
Ah.14g089640 Amaranthus hybridus HOM05D005633 ORTHO05D007003 3.7e-155 552.7 736 43.5
A09p37740 Brassica napus HOM05D005633 ORTHO05D007003 1.5e-151 540.8 741 44.7
BraA09t39286Z Brassica rapa HOM05D005633 ORTHO05D007003 1.6e-150 537.3 741 44.5
Hund21211 Selenicereus undatus HOM05D005633 ORTHO05D007003 2.1e-150 537.0 821 41.4
C05p27200 Brassica napus HOM05D005633 ORTHO05D007003 3.0e-149 533.1 745 44.8
BolC5t31434H Brassica oleracea HOM05D005633 ORTHO05D007003 3.0e-149 533.1 745 44.3
vmacro15920 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 8.9e-149 531.6 480 57.9
Aa31sc86G40 Aethionema arabicum HOM05D005633 ORTHO05D007003 9.2e-146 521.5 763 42.3
Cpa.g.sc373.8 Carica papaya HOM05D005633 ORTHO05D007003 1.7e-144 517.3 495 55.4
Ciclev10014582m.g Citrus clementina HOM05D005633 ORTHO05D007003 6.6e-144 515.4 653 47.6
PGR042G0490 Punica granatum HOM05D005633 ORTHO05D007003 8.6e-144 515.0 766 41.1
MELO3C007272.2 Cucumis melo HOM05D005633 ORTHO05D007003 8.0e-142 508.4 688 44.5
ATR0752G234 Amborella trichopoda HOM05D005633 ORTHO05D007003 7.8e-137 491.9 746 41.6
Hma1.2p1_0208F.1_g088340 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.7e-136 490.7 465 57.0
SEGI_06204 Sequoiadendron giganteum HOM05D005633 ORTHO05D007003 2.6e-132 476.9 778 39.7
Haze_06405 Corylus avellana HOM05D005633 ORTHO05D007003 6.4e-131 472.2 570 47.2
Prupe.4G050600 Prunus persica HOM05D005633 ORTHO05D007003 5.2e-125 452.6 560 45.0
Thhalv10007180m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 6.8e-117 425.6 695 41.2
Pp3c24_9210 Physcomitrium patens HOM05D005633 ORTHO05D007003 9.9e-116 421.8 798 36.3
Eucgr.E03258 Eucalyptus grandis HOM05D005633 ORTHO05D007003 2.2e-115 420.6 570 43.9
unitig_27.g24969 Utricularia gibba HOM05D005633 ORTHO05D007003 2.7e-113 413.7 759 36.4
Zm00001eb291760 Zea mays HOM05D005633 ORTHO05D007003 4.6e-113 412.9 747 35.6
RcHm_v2.0_Chr5g0008891 Rosa chinensis HOM05D005633 ORTHO05D007003 2.8e-110 403.7 380 57.4
Mapoly0045s0140 Marchantia polymorpha HOM05D005633 ORTHO05D007003 4.0e-109 399.8 817 35.9
AagrBONN_evm.TU.Sc2ySwM_228.2766 Anthoceros agrestis HOM05D005633 ORTHO05D007003 9.3e-106 388.7 798 35.3
Os05g0497700 Oryza sativa ssp. japonica HOM05D005633 ORTHO05D007003 1.0e-104 385.2 714 37.3
BcaB07g32447 Brassica carinata HOM05D005633 ORTHO05D007003 5.3e-93 346.3 367 53.1
Glyma.15G076300 Glycine max HOM05D005633 ORTHO05D007003 3.3e-79 300.4 742 33.2
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 2.2e-78 297.7 407 44.2
CBR_g49783 Chara braunii HOM05D005633 ORTHO05D001702 1.4e-61 241.9 591 30.5
RcHm_v2.0_Chr5g0008901 Rosa chinensis HOM05D005633 ORTHO05D007003 3.3e-55 220.7 313 43.1
Haze_06406 Corylus avellana HOM05D005633 ORTHO05D007003 5.7e-55 219.9 185 64.3
HPP92_025316 Vanilla planifolia HOM05D005633 ORTHO05D007003 1.3e-51 208.8 244 49.6
MBI02_g35620_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 6.1e-49 199.9 452 33.0
HPP92_025315 Vanilla planifolia HOM05D005633 ORTHO05D007003 4.8e-46 190.3 424 33.5
BcaB07g32448 Brassica carinata HOM05D005633 ORTHO05D007003 3.1e-45 187.6 311 37.9
MBI02_g35622_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 1.2e-44 185.7 262 45.4
Cpa.g.sc373.5 Carica papaya HOM05D005633 ORTHO05D007003 3.8e-43 180.6 182 52.2
Actinidia39471 Actinidia chinensis HOM05D005633 ORTHO05D007003 1.7e-35 155.2 127 65.4
MBI02_g35619_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 5.0e-35 153.7 223 43.0
vmacro15921 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 2.9e-30 137.9 116 59.5
CDE11G0408 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 1.5e-23 115.5 179 39.1
MCO12G111 Micromonas commoda HOM05D005633 ORTHO05D007003 3.4e-23 114.4 450 29.3
MD05G1312100 Malus domestica HOM05D005633 ORTHO05D007003 4.9e-22 110.5 57 91.2
MapolyY_B0048 Marchantia polymorpha HOM05D005633 ORTHO05D007003 5.4e-21 107.1 114 47.4
CDE05G1605 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 3.7e-14 84.3 82 56.1
MBI02_g19359_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 4.9e-14 84.0 56 64.3
Cre12.g548200 Chlamydomonas reinhardtii HOM05D005633 ORTHO05D007003 9.2e-13 79.7 107 34.6
MBI02_g19360_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 4.3e-10 70.9 195 31.3
BolC3t19753H Brassica oleracea HOM05D005633 ORTHO05D007003 2.4e-08 65.1 43 65.1
Sabra05G0135200 Salix brachista HOM05D005633 ORTHO05D007003 7.6e-07 60.1 80 41.2
A08p25680 Brassica napus HOM05D005633 ORTHO05D007003 1.3e-06 59.3 43 60.5


User provided reference genes

Program Settings