Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 1.7e-154 549.3 271 100.0
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 9.5e-142 506.9 271 92.6
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.4e-113 412.5 246 81.3
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 9.3e-113 410.6 280 73.9
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 1.5e-110 403.3 280 72.9
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 1.6e-109 399.8 264 74.2
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.1e-109 399.4 246 79.7
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 3.9e-103 378.6 281 64.4
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 4.3e-102 375.2 277 67.5
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 5.7e-102 374.8 281 64.8
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 2.8e-101 372.5 284 66.2
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 3.7e-101 372.1 284 64.1
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 1.4e-100 370.2 284 64.1
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 1.8e-100 369.8 250 73.2
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 1.8e-100 369.8 289 64.7
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 4.1e-100 368.6 289 65.4
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 2.6e-99 365.9 281 64.4
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 3.4e-99 365.5 284 65.5
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 4.5e-99 365.2 286 64.3
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 1.0e-98 364.0 285 64.9
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 1.7e-98 363.2 281 64.4
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 5.0e-98 361.7 283 66.8
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 3.2e-97 359.0 287 61.7
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 9.3e-97 357.5 225 78.2
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 9.3e-97 357.5 257 67.7
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 1.2e-96 357.1 246 70.7
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 1.6e-96 356.7 283 65.0
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 1.6e-96 356.7 278 65.5
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 1.6e-96 356.7 288 61.1
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 2.1e-96 356.3 303 59.1
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 6.1e-96 354.8 284 64.8
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 6.1e-96 354.8 284 63.0
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 1.0e-95 354.0 284 62.0
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 3.0e-95 352.4 284 63.0
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 5.1e-95 351.7 251 66.5
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 8.8e-95 350.9 284 63.4
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 4.3e-94 348.6 282 63.5
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 5.7e-94 348.2 284 64.8
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 1.3e-93 347.1 289 61.9
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 3.7e-93 345.5 289 61.6
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 1.4e-92 343.6 284 63.7
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 1.8e-92 343.2 292 61.6
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 2.4e-92 342.8 292 60.6
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 3.1e-92 342.4 285 63.2
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 3.1e-92 342.4 277 59.9
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 4.1e-92 342.0 278 63.3
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 4.1e-92 342.0 282 61.3
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 4.1e-92 342.0 249 67.5
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 5.3e-92 341.7 287 59.6
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 5.3e-92 341.7 292 61.0
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 5.3e-92 341.7 281 61.9
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 6.9e-92 341.3 278 60.4
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 6.9e-92 341.3 284 63.0
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 1.5e-91 340.1 282 61.7
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 2.0e-91 339.7 293 61.8
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 4.5e-91 338.6 283 61.1
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 5.9e-91 338.2 284 60.6
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 5.9e-91 338.2 284 60.2
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.9e-90 335.9 257 65.8
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 5.0e-90 335.1 284 63.4
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 6.5e-90 334.7 277 61.7
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 8.5e-90 334.3 278 59.4
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 8.5e-90 334.3 284 60.2
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 1.9e-89 333.2 278 59.7
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.9e-89 333.2 272 62.5
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 2.5e-89 332.8 284 60.2
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 5.5e-89 331.6 277 57.8
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 5.5e-89 331.6 277 59.6
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 9.4e-89 330.9 277 61.4
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.2e-88 330.5 262 63.4
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 1.2e-88 330.5 311 55.6
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 7.9e-88 327.8 221 72.4
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 1.0e-87 327.4 224 70.5
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 1.8e-87 326.6 224 68.3
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 2.3e-87 326.2 285 58.6
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 3.0e-87 325.9 279 57.7
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.0e-87 325.9 241 67.6
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 2.0e-86 323.2 276 59.1
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 2.6e-86 322.8 278 59.0
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 3.3e-86 322.4 252 63.9
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 4.4e-86 322.0 210 74.3
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 7.4e-86 321.2 285 58.6
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 9.7e-86 320.9 284 59.2
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 1.3e-85 320.5 285 58.2
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 1.7e-85 320.1 237 65.4
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 2.8e-85 319.3 169 91.1
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 7.0e-84 314.7 302 57.9
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 2.0e-83 313.2 262 60.3
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 5.9e-83 311.6 247 60.7
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 5.9e-83 311.6 247 60.7
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 1.0e-82 310.8 247 60.7
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 1.0e-82 310.8 247 60.7
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 2.2e-82 309.7 217 68.2
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 2.2e-82 309.7 277 59.2
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 5.0e-82 308.5 285 56.1
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 1.4e-81 307.0 223 65.9
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 1.2e-80 303.9 246 62.2
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 1.6e-80 303.5 224 66.1
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 3.9e-79 298.9 277 57.8
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 3.9e-79 298.9 253 60.1
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 5.7e-78 295.0 219 63.9
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 7.4e-78 294.7 224 62.5
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 9.7e-78 294.3 222 65.3
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 1.1e-76 290.8 221 63.8
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 2.6e-75 286.2 282 53.2
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 4.5e-75 285.4 292 53.4
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 3.6e-72 275.8 188 72.3
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 7.5e-70 268.1 175 72.0
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 4.8e-69 265.4 151 84.8
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 1.0e-58 231.1 250 52.4
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 1.4e-55 220.7 260 48.8
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 4.0e-55 219.2 166 65.1
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 9.2e-52 208.0 181 53.0
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 2.0e-51 206.8 238 44.5
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.7e-50 203.8 113 83.2
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 2.9e-50 203.0 131 76.3
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 1.9e-49 200.3 210 45.7
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 4.0e-47 192.6 136 71.3
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 2.4e-44 183.3 212 39.6
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 6.6e-42 175.3 101 81.2
Lalb_Chr16g0382791 Lupinus albus HOM05D005379 ORTHO05D006661 6.6e-42 175.3 148 57.4
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 3.3e-41 172.9 176 44.9
Dinv06594 Davidia involucrata HOM05D005379 ORTHO05D006661 9.2e-36 154.8 133 57.9
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 4.3e-25 119.4 80 68.8
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 3.6e-24 116.3 80 66.2
BcaC03g14620 Brassica carinata HOM05D005379 ORTHO05D006661 1.5e-22 110.9 82 58.5
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 4.4e-22 109.4 74 70.3
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 9.9e-22 108.2 182 31.3
BolC2t08192H Brassica oleracea HOM05D005379 ORTHO05D006661 3.9e-18 96.3 69 62.3
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 1.9e-17 94.0 184 33.7
Ah.13g066320 Amaranthus hybridus HOM05D005379 ORTHO05D006661 8.1e-16 88.6 130 44.6
Ah.13g066300 Amaranthus hybridus HOM05D005379 ORTHO05D006661 9.0e-15 85.1 119 44.5
HPP92_009967 Vanilla planifolia HOM05D005379 ORTHO05D006661 6.4e-13 79.0 83 48.2
SEGI_00850 Sequoiadendron giganteum HOM05D005379 ORTHO05D006661 1.9e-12 77.4 47 76.6
HPP92_009968 Vanilla planifolia HOM05D005379 ORTHO05D006661 1.7e-10 70.9 40 80.0
C02p20560 Brassica napus HOM05D005379 ORTHO05D006661 6.9e-07 58.9 52 50.0


User provided reference genes

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