Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 4.3e-189 664.5 328 100.0
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 2.3e-137 492.7 320 78.1
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 1.5e-136 490.0 321 76.6
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 1.3e-121 440.3 321 72.9
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 1.8e-118 429.9 321 71.3
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 5.8e-117 424.9 321 70.4
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.4e-99 367.1 330 61.5
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 4.2e-99 365.5 327 60.9
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 5.4e-99 365.2 261 68.2
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.3e-97 360.5 330 58.2
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 2.3e-97 359.8 327 59.6
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 6.6e-97 358.2 326 60.1
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 2.5e-96 356.3 322 59.0
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 3.3e-96 355.9 326 57.1
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 7.3e-96 354.8 323 57.9
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 7.3e-96 354.8 274 65.7
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.3e-95 354.0 328 59.1
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.6e-95 353.6 243 75.3
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.6e-95 352.4 243 75.3
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 8.1e-95 351.3 276 66.3
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 3.1e-94 349.4 333 56.8
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 4.0e-94 349.0 240 70.0
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 4.0e-94 349.0 279 62.4
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 4.0e-94 349.0 319 58.3
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 5.3e-94 348.6 240 70.0
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 6.9e-94 348.2 327 56.0
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 6.9e-94 348.2 327 56.6
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 1.5e-93 347.1 327 56.3
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 1.5e-93 347.1 327 56.3
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 2.0e-93 346.7 255 65.5
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 2.0e-93 346.7 242 67.8
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 2.6e-93 346.3 329 58.7
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 9.9e-93 344.4 336 56.2
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 1.7e-92 343.6 252 65.9
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.9e-92 342.8 330 58.8
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.8e-92 342.4 228 75.4
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.9e-92 342.0 330 58.8
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 4.9e-92 342.0 338 54.7
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 6.4e-92 341.7 328 54.9
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 8.4e-92 341.3 245 68.2
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 8.4e-92 341.3 328 54.6
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.1e-91 340.9 330 58.8
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 2.4e-91 339.7 255 64.3
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 3.2e-91 339.3 256 64.5
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 7.1e-91 338.2 333 55.9
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 7.1e-91 338.2 339 55.2
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.6e-90 337.0 328 54.6
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 2.7e-90 336.3 274 63.1
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 2.7e-90 336.3 339 55.5
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 3.5e-90 335.9 251 66.1
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 6.0e-90 335.1 334 55.7
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 6.0e-90 335.1 290 59.0
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.7e-89 333.6 239 69.5
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 2.3e-89 333.2 330 56.1
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.1e-88 330.9 244 66.8
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 1.5e-88 330.5 334 54.8
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 3.3e-88 329.3 289 56.1
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 5.6e-88 328.6 237 68.4
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 7.4e-88 328.2 245 66.5
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 9.6e-88 327.8 278 61.5
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 1.3e-87 327.4 333 54.1
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 4.8e-87 325.5 241 64.7
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 6.2e-87 325.1 243 64.2
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.4e-86 323.9 241 64.7
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 1.8e-86 323.6 246 64.6
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 2.4e-86 323.2 329 54.1
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 3.1e-86 322.8 333 53.2
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 3.1e-86 322.8 275 60.4
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.0e-86 322.4 274 58.8
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 4.0e-86 322.4 266 61.7
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 4.0e-86 322.4 266 61.7
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 6.9e-86 321.6 266 61.7
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 9.0e-86 321.2 243 63.4
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 1.2e-85 320.9 262 62.6
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.2e-85 320.9 262 62.6
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.5e-85 320.5 251 65.7
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.4e-85 319.3 328 53.4
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.5e-85 318.9 257 63.4
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 5.8e-85 318.5 267 61.4
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 5.8e-85 318.5 261 60.9
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 7.6e-85 318.2 274 59.9
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 2.2e-84 316.6 248 63.7
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.8e-84 315.8 234 65.0
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 3.8e-84 315.8 315 53.3
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 6.4e-84 315.1 324 51.5
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.1e-83 314.3 306 54.2
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 3.2e-83 312.8 246 62.6
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 4.2e-83 312.4 215 72.1
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.8e-81 307.0 243 62.6
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.3e-80 302.8 288 55.9
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 5.6e-80 302.0 245 60.8
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 9.6e-80 301.2 216 67.6
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 6.2e-79 298.5 332 49.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.4e-78 296.6 319 53.3
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.9e-76 289.7 251 57.4
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 7.1e-75 285.0 331 50.5
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 1.6e-74 283.9 241 59.8
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 2.1e-71 273.5 230 63.0
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 3.0e-65 253.1 240 56.7
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.3e-63 247.7 234 53.4
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 7.9e-58 228.4 158 71.5
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.5e-56 224.2 240 52.1
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.4e-54 217.6 166 63.9
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 7.7e-53 211.8 144 75.0
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 2.5e-51 206.8 285 44.2
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 2.1e-50 203.8 289 43.6
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.5e-48 197.6 155 61.9
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 2.2e-47 193.7 179 53.6
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.8e-47 193.4 138 68.1
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 4.8e-47 192.6 144 62.5
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 7.0e-46 188.7 250 41.6
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 9.1e-46 188.3 238 42.9
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.3e-44 184.5 251 39.0
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 6.7e-41 172.2 205 51.2
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.8e-41 171.8 201 51.2
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.4e-38 164.5 131 64.1
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 2.4e-38 163.7 149 53.7
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 2.4e-38 163.7 110 73.6
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 7.7e-37 158.7 111 71.2
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.6e-34 151.0 125 62.4
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.7e-28 131.0 140 45.7
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 3.1e-22 110.2 178 38.8
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.6e-18 96.7 64 73.4
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 8.9e-17 92.0 74 60.8
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 8.3e-15 85.5 75 60.0


User provided reference genes

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