Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.2e-188 662.9 322 100.0
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 7.4e-125 451.1 328 72.3
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.6e-124 449.9 328 72.3
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 8.2e-100 367.9 328 60.7
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 1.2e-90 337.4 328 55.5
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 1.7e-89 333.6 328 55.8
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 3.6e-87 325.9 206 76.2
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 2.1e-71 273.5 267 54.7
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 6.4e-68 261.9 333 46.2
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 2.1e-63 246.9 191 63.9
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 1.0e-62 244.6 189 63.5
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 8.9e-62 241.5 226 56.6
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 1.5e-61 240.7 183 64.5
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 2.0e-61 240.4 226 56.2
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 3.4e-61 239.6 185 64.9
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 3.4e-61 239.6 224 54.5
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 1.7e-60 237.3 188 61.2
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 1.7e-60 237.3 206 59.7
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 2.2e-60 236.9 182 63.7
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 2.9e-60 236.5 184 65.8
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 2.9e-60 236.5 184 65.2
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 3.7e-60 236.1 188 60.1
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 4.9e-60 235.7 197 58.9
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 6.4e-60 235.3 226 54.4
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 8.3e-60 235.0 195 61.0
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 1.9e-59 233.8 182 62.6
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 2.4e-59 233.4 233 52.4
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 2.4e-59 233.4 233 52.8
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 3.2e-59 233.0 174 65.5
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 4.6e-58 229.2 183 60.7
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 7.8e-58 228.4 209 56.0
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 1.0e-57 228.0 183 64.5
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 1.0e-57 228.0 212 53.8
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 1.0e-57 228.0 184 64.7
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 1.3e-57 227.6 191 59.2
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 1.3e-57 227.6 185 62.2
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 2.3e-57 226.9 185 62.2
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 6.6e-57 225.3 188 61.7
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 8.6e-57 224.9 184 62.0
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 1.5e-56 224.2 182 63.2
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 1.6e-55 220.7 206 54.9
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 1.6e-55 220.7 184 60.3
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 2.1e-55 220.3 182 63.2
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 3.6e-55 219.5 185 60.5
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 3.6e-55 219.5 182 57.7
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 6.2e-55 218.8 203 55.2
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 1.4e-54 217.6 198 53.5
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 1.8e-54 217.2 191 56.5
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.8e-54 217.2 182 59.9
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 4.0e-54 216.1 186 59.1
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 6.8e-54 215.3 182 59.9
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 6.8e-54 215.3 190 56.3
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 8.9e-54 214.9 182 59.9
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 1.5e-53 214.2 186 54.8
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 3.4e-53 213.0 219 50.2
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 4.4e-53 212.6 184 56.0
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 9.8e-53 211.5 183 59.6
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.3e-52 211.1 182 59.3
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 6.4e-52 208.8 186 55.4
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 1.4e-51 207.6 186 56.5
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 1.9e-51 207.2 184 56.0
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 2.4e-51 206.8 199 53.3
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 2.1e-50 203.8 199 52.3
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 1.0e-49 201.4 186 55.4
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 2.3e-49 200.3 204 51.5
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 4.3e-48 196.1 235 47.2
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 5.6e-48 195.7 206 50.0
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 9.5e-48 194.9 222 46.4
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 2.1e-47 193.7 184 52.2
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 2.8e-47 193.4 206 49.5
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 3.6e-47 193.0 205 49.3
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 6.2e-47 192.2 206 49.5
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 8.1e-47 191.8 235 46.4
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 1.8e-46 190.7 206 49.5
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 8.9e-46 188.3 228 44.3
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.2e-45 188.0 180 53.9
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 2.0e-45 187.2 207 48.8
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 3.4e-45 186.4 183 50.3
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 3.4e-45 186.4 188 52.1
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 5.4e-43 179.1 205 46.3
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 2.1e-42 177.2 185 51.4
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 2.1e-42 177.2 185 51.4
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 7.6e-37 158.7 182 44.0
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 1.3e-36 157.9 166 48.8
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 1.9e-32 144.1 183 41.0
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 3.3e-32 143.3 181 40.3
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 3.8e-28 129.8 114 58.8
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 4.2e-27 126.3 162 42.0
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 2.0e-21 107.5 84 61.9
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 4.5e-21 106.3 95 55.8
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 3.3e-16 90.1 99 45.5
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 8.1e-15 85.5 90 48.9
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 9.0e-14 82.0 192 31.2
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 7.6e-13 79.0 64 60.9
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 1.3e-12 78.2 72 51.4


User provided reference genes

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