Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 0.0e+00 2048.9 1103 100.0
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 0.0e+00 1608.2 1169 79.9
Nitab4.5_0000406g0040 Nicotiana tabacum HOM05D004021 ORTHO05D003767 0.0e+00 1401.3 1112 76.5
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 1.9e-241 840.1 1259 48.6
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.3e-164 583.6 1202 40.0
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.0e-161 574.3 1190 39.3
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.3e-160 571.6 1201 38.7
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.6e-158 563.1 1199 39.1
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 9.5e-156 555.4 1202 37.9
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 6.0e-150 536.2 1202 38.4
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 7.3e-140 502.7 1212 37.0
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 6.6e-133 479.6 1211 35.8
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 1.5e-132 478.4 1213 35.5
PGSC0003DMG400005497 Solanum tuberosum HOM05D026527 ORTHO05D037674 1.1e-37 163.3 551 31.0
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 9.9e-36 156.8 1153 25.0
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 6.6e-32 144.1 628 27.5
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.5e-31 142.9 1166 24.8
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 2.0e-28 132.5 1321 24.9
Sopen08g022290 Solanum pennellii HOM05D026527 ORTHO05D037674 8.4e-27 127.1 550 28.0
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.1e-26 126.7 693 27.4
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 7.1e-26 124.0 946 24.3
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 2.1e-25 122.5 519 28.5
Solyc08g068410.3 Solanum lycopersicum HOM05D026527 ORTHO05D037674 2.1e-25 122.5 550 27.6
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 4.6e-25 121.3 510 30.0
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 3.6e-22 111.7 1313 24.1
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 2.6e-20 105.5 975 23.3
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 1.3e-19 103.2 517 28.6
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 3.8e-19 101.7 1199 22.9
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 8.4e-19 100.5 518 28.2
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 1.1e-18 100.1 1173 23.1
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 1.1e-18 100.1 485 27.2
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 2.1e-17 95.9 639 27.2
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 2.7e-17 95.5 710 26.3
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 2.7e-17 95.5 620 24.2
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 6.0e-17 94.4 695 27.1
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 7.8e-17 94.0 107 49.5
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 2.3e-16 92.4 934 24.3
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 3.0e-16 92.0 617 26.4
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 5.1e-16 91.3 617 26.4
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 8.7e-16 90.5 819 24.9
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 1.9e-15 89.4 681 25.0
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 2.5e-15 89.0 616 26.1
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 4.3e-15 88.2 135 41.5
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 7.3e-15 87.4 691 27.4
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 1.3e-14 86.7 461 26.7
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 6.2e-14 84.3 1311 22.8
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 8.1e-14 84.0 111 41.4
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 1.8e-13 82.8 102 39.2
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 2.4e-13 82.4 617 25.9
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 2.4e-13 82.4 635 26.1
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 4.0e-13 81.6 635 25.2
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 5.3e-13 81.3 323 26.3
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 6.9e-13 80.9 619 26.0
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 1.5e-12 79.7 628 25.6
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 3.4e-12 78.6 637 25.1
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 3.4e-12 78.6 114 43.0
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 4.5e-12 78.2 112 39.3
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 7.6e-12 77.4 635 24.3
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 9.9e-12 77.0 101 38.6
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.3e-11 76.6 622 25.2
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.7e-11 76.3 662 25.2
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 2.9e-11 75.5 116 37.1
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 4.9e-11 74.7 78 47.4
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 6.4e-11 74.3 54 61.1
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 1.4e-10 73.2 315 27.0
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.4e-10 73.2 104 42.3
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 1.9e-10 72.8 119 37.0
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 1.9e-10 72.8 508 24.0
vmacro05366 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 2.4e-10 72.4 475 26.9
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 2.4e-10 72.4 74 44.6
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 3.2e-10 72.0 86 41.9
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 5.4e-10 71.2 450 24.4
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 5.4e-10 71.2 572 25.5
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 7.1e-10 70.9 84 41.7
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 9.3e-10 70.5 84 40.5
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 1.2e-09 70.1 635 25.2
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 1.2e-09 70.1 400 24.5
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 1.6e-09 69.7 73 45.2
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 2.1e-09 69.3 72 45.8
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 2.1e-09 69.3 100 45.0
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 2.7e-09 68.9 83 42.2
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 2.7e-09 68.9 80 42.5
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 3.5e-09 68.6 930 22.4
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 6.0e-09 67.8 135 31.9
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 6.0e-09 67.8 70 44.3
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 6.0e-09 67.8 239 27.6
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 7.9e-09 67.4 152 31.6
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 7.9e-09 67.4 1176 22.7
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 1.0e-08 67.0 234 26.9
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 1.8e-08 66.2 426 25.1
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 2.3e-08 65.9 104 30.8
unitig_85.g27153 Utricularia gibba HOM05D004021 ORTHO05D003767 3.0e-08 65.5 112 37.5
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 3.9e-08 65.1 329 24.9
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 3.9e-08 65.1 651 24.0
ECA233G1986 Erigeron canadensis HOM05D004021 ORTHO05D003767 5.1e-08 64.7 97 40.2
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 6.7e-08 64.3 386 24.1
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 1.5e-07 63.2 462 25.1
PSO782G1327 Papaver somniferum HOM05D004021 ORTHO05D003767 1.5e-07 63.2 62 48.4
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 1.9e-07 62.8 425 24.2
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 1.9e-07 62.8 129 31.0
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 3.3e-07 62.0 319 25.4
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 3.3e-07 62.0 319 25.4
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 4.3e-07 61.6 434 23.5
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 5.6e-07 61.2 443 25.1
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 5.6e-07 61.2 83 33.7
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 5.6e-07 61.2 325 27.4
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 7.4e-07 60.8 98 32.7
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 7.4e-07 60.8 98 32.7
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 7.4e-07 60.8 512 24.8
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 7.4e-07 60.8 78 38.5
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 9.6e-07 60.5 513 25.7
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 1.3e-06 60.1 67 43.3
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 1.3e-06 60.1 461 24.9
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.3e-06 60.1 88 38.6
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 1.6e-06 59.7 98 31.6
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 1.6e-06 59.7 479 24.4
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 1.6e-06 59.7 98 31.6
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 1.6e-06 59.7 875 22.9
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 2.1e-06 59.3 317 25.2
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 2.8e-06 58.9 98 30.6
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 4.8e-06 58.2 309 25.2
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 6.2e-06 57.8 314 26.4


User provided reference genes

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