Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 0.0e+00 1399.8 729 100.0
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 0.0e+00 1303.9 735 93.2
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 6.0e-311 1070.5 686 81.6
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 1.5e-298 1029.2 731 76.2
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 5.2e-219 765.0 710 59.7
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 7.8e-207 724.5 693 57.9
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 2.4e-203 713.0 690 57.7
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 2.9e-201 706.1 752 55.2
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 3.5e-199 699.1 714 56.0
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 4.6e-199 698.7 608 60.7
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 1.5e-197 693.7 683 56.7
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 1.6e-196 690.3 720 54.9
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 1.8e-195 686.8 689 56.2
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 2.6e-194 682.9 759 53.8
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 4.5e-194 682.2 759 53.4
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 6.4e-193 678.3 694 55.3
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 3.2e-192 676.0 706 54.4
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 2.7e-191 672.9 730 54.5
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 3.9e-190 669.1 764 51.7
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 8.7e-190 667.9 712 53.4
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 9.6e-189 664.5 710 53.4
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 2.1e-188 663.3 759 53.4
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 3.7e-188 662.5 767 52.4
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 2.4e-187 659.8 730 52.5
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 2.4e-187 659.8 713 53.6
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 5.3e-187 658.7 742 52.4
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 7.6e-186 654.8 724 52.6
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 1.0e-185 654.4 721 52.1
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 2.2e-185 653.3 746 50.9
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 2.2e-185 653.3 692 55.3
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 6.5e-185 651.7 715 52.6
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 8.4e-185 651.4 726 52.1
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 1.9e-184 650.2 696 53.0
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 2.5e-184 649.8 699 51.6
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 4.2e-184 649.0 722 52.8
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 4.2e-184 649.0 755 51.1
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 1.2e-183 647.5 749 50.5
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 2.7e-183 646.4 712 51.8
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 1.0e-182 644.4 723 51.9
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 2.3e-182 643.3 740 51.5
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 3.0e-182 642.9 720 51.8
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 5.1e-182 642.1 727 51.6
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 6.7e-182 641.7 661 54.9
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 6.7e-182 641.7 731 51.7
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.9e-181 640.2 700 51.9
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 2.1e-180 636.7 731 51.4
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 3.7e-180 636.0 745 51.0
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 1.8e-179 633.6 734 50.1
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 2.0e-178 630.2 751 50.1
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 1.0e-177 627.9 724 51.1
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 2.2e-177 626.7 725 51.9
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 1.4e-176 624.0 755 49.9
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 1.9e-176 623.6 685 51.2
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 2.5e-176 623.2 611 58.1
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 3.2e-176 622.9 695 50.4
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 9.3e-176 621.3 712 49.6
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 2.7e-175 619.8 755 49.8
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 3.9e-174 615.9 661 53.4
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 3.9e-174 615.9 707 52.6
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 6.7e-174 615.1 714 51.0
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 1.8e-171 607.1 720 49.3
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 6.9e-171 605.1 662 53.3
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 7.7e-170 601.7 721 49.1
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 7.7e-170 601.7 761 48.2
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 8.5e-169 598.2 730 49.5
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 8.5e-169 598.2 716 50.3
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 1.4e-166 590.9 699 49.8
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 3.9e-166 589.3 582 55.3
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 1.3e-164 584.3 640 52.2
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.3e-164 584.3 475 62.7
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 2.8e-164 583.2 723 48.8
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 4.8e-164 582.4 772 46.4
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 1.4e-163 580.9 735 48.3
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 1.4e-163 580.9 718 47.2
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 2.4e-163 580.1 713 49.2
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 6.5e-161 572.0 784 46.2
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 1.1e-160 571.2 719 48.3
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 1.4e-160 570.9 730 48.2
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 1.4e-160 570.9 789 45.9
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 7.9e-159 565.1 706 47.2
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 1.0e-158 564.7 773 45.5
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 3.9e-158 562.8 629 50.4
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 5.7e-157 558.9 776 44.8
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 7.4e-157 558.5 750 44.9
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 4.1e-155 552.7 775 44.9
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 7.0e-155 552.0 776 44.2
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 1.6e-154 550.8 696 48.7
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 7.7e-154 548.5 772 44.0
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 5.2e-150 535.8 371 77.4
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 4.4e-149 532.7 693 45.6
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 2.2e-148 530.4 654 46.9
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 4.1e-147 526.2 627 47.5
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.2e-138 498.0 501 54.3
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 7.7e-130 468.8 536 50.2
Atru.chr6.2689 Acer truncatum HOM05D006071 ORTHO05D007462 8.0e-127 458.8 423 58.4
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 1.6e-119 434.5 501 50.7
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 3.6e-119 433.3 700 40.1
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.1e-115 421.8 473 50.7
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 1.8e-110 404.4 652 39.3
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 5.4e-107 392.9 653 41.7
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 4.6e-106 389.8 684 36.8
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 7.3e-96 355.9 805 33.9
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 1.2e-95 355.1 456 46.3
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 9.9e-93 345.5 598 40.3
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 1.0e-89 335.5 415 45.3
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 4.6e-66 256.9 797 27.9
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 1.3e-57 228.8 733 29.2
Psat2g052360 Pisum sativum HOM05D006071 ORTHO05D007462 1.2e-50 205.7 469 35.4
AUR62041071 Chenopodium quinoa HOM05D006071 ORTHO05D007462 2.1e-50 204.9 226 52.7
Psat2g087400 Pisum sativum HOM05D006071 ORTHO05D007462 1.2e-42 179.1 335 37.6
CDE05G1324 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 1.1e-40 172.6 250 44.0
HanXRQChr17g0550971 Helianthus annuus HOM05D006071 ORTHO05D007462 3.5e-37 161.0 205 46.3
HanXRQChr17g0550951 Helianthus annuus HOM05D006071 ORTHO05D007462 1.3e-36 159.1 235 45.1
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 6.1e-34 150.2 561 24.4
Cre03.g144687 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 4.1e-30 137.5 619 21.8
Sc07g0003760 Simmondsia chinensis HOM05D006071 ORTHO05D007462 7.2e-27 126.7 142 50.0
Psat0s2046g0080 Pisum sativum HOM05D006071 ORTHO05D007462 2.8e-23 114.8 130 51.5
Atru.chr6.2690 Acer truncatum HOM05D006071 ORTHO05D007462 1.8e-22 112.1 200 42.5
Psat0s2046g0120 Pisum sativum HOM05D006071 ORTHO05D007462 3.1e-22 111.3 94 61.7
Lj1g0013684 Lotus japonicus HOM05D006071 ORTHO05D007462 4.4e-16 90.9 105 49.5
Psat2g087520 Pisum sativum HOM05D006071 ORTHO05D007462 1.1e-14 86.3 146 41.8
Atru.chr6.2688 Acer truncatum HOM05D006071 ORTHO05D007462 7.0e-14 83.6 97 52.6
Cre16.g681251 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 2.9e-12 78.2 168 27.4
unitig_0.g2405 Utricularia gibba HOM05D006071 ORTHO05D007462 7.3e-11 73.6 100 52.0
Actinidia09845 Actinidia chinensis HOM05D006071 ORTHO05D007462 8.0e-10 70.1 70 48.6
Actinidia09844 Actinidia chinensis HOM05D006071 ORTHO05D007462 9.8e-08 63.2 79 46.8
CDE05G2071 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 8.3e-07 60.1 103 43.7
Cfa014606 Carpinus fangiana HOM05D000463 ORTHO05D001294 1.1e-06 59.7 100 31.0
Haze_13153 Corylus avellana HOM05D000463 ORTHO05D001294 1.4e-06 59.3 100 31.0
Hma1.2p1_0868F.1_g230520 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.4e-06 59.3 149 31.5
Glyma.13G297700 Glycine max HOM05D000463 ORTHO05D001294 5.4e-06 57.4 96 32.3
Solyc02g078320.3 Solanum lycopersicum HOM05D000463 ORTHO05D001294 5.4e-06 57.4 85 35.3
Sopen02g023160 Solanum pennellii HOM05D000463 ORTHO05D001294 7.0e-06 57.0 85 34.1
Cpa.g.sc92.77 Carica papaya HOM05D000515 ORTHO05D005511 9.2e-06 56.6 102 32.4
Peaxi162Scf00736g00046 Petunia axillaris HOM05D000463 ORTHO05D001294 9.2e-06 56.6 103 28.2


User provided reference genes

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