Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.6e-75 286.2 165 100.0
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 5.2e-66 254.6 165 89.7
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.9e-48 195.7 164 75.0
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.3e-45 186.8 164 71.3
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.7e-45 186.4 164 72.0
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 3.6e-43 178.7 163 61.3
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 8.9e-42 174.1 162 60.5
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.2e-41 173.7 162 59.9
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.5e-41 173.3 165 68.5
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 2.0e-41 172.9 163 69.3
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.0e-41 172.9 165 67.9
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 5.8e-41 171.4 164 60.4
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 9.9e-41 170.6 163 62.0
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.3e-40 170.2 164 62.2
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.7e-40 169.9 162 67.3
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 4.9e-40 168.3 164 59.8
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 6.4e-40 167.9 165 59.4
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 6.4e-40 167.9 166 64.5
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.1e-39 167.2 163 59.5
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.1e-39 167.2 165 57.6
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 1.4e-39 166.8 166 65.1
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.4e-39 166.8 166 56.6
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.4e-39 166.8 164 61.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.4e-39 166.8 161 62.1
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 2.4e-39 166.0 164 61.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 7.1e-39 164.5 161 57.8
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 9.2e-39 164.1 162 58.6
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 9.2e-39 164.1 156 59.0
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 1.2e-38 163.7 165 55.8
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.6e-38 163.3 165 57.6
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.6e-38 163.3 169 58.0
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.1e-38 162.9 165 57.6
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 2.1e-38 162.9 165 53.9
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 2.7e-38 162.5 166 56.0
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 3.5e-38 162.2 144 72.9
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 4.6e-38 161.8 162 66.0
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 7.8e-38 161.0 159 59.7
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.0e-37 160.6 165 58.2
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.0e-37 160.6 165 58.2
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.3e-37 160.2 166 54.8
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.7e-37 159.8 165 57.0
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 1.7e-37 159.8 165 62.4
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.1e-36 157.1 161 56.5
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.1e-36 157.1 166 64.5
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 1.9e-36 156.4 167 55.7
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 1.9e-36 156.4 165 59.4
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 2.5e-36 156.0 163 60.1
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.5e-36 156.0 165 58.2
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 3.3e-36 155.6 165 60.6
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 4.3e-36 155.2 165 61.8
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 7.3e-36 154.5 163 55.8
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 7.3e-36 154.5 166 65.7
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 9.6e-36 154.1 163 63.2
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 2.1e-35 152.9 162 56.2
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 2.1e-35 152.9 166 59.6
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 4.7e-35 151.8 165 54.5
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 1.1e-34 150.6 159 54.1
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 1.4e-34 150.2 165 52.1
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 2.4e-34 149.4 165 53.9
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 6.9e-34 147.9 165 55.2
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.2e-33 147.1 159 52.2
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 1.2e-33 147.1 190 55.3
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.5e-33 146.7 162 54.3
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 2.0e-33 146.4 165 61.2
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.0e-33 146.4 158 53.8
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 7.6e-33 144.4 165 51.5
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.7e-32 143.3 162 51.9
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 3.8e-32 142.1 163 49.1
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 1.9e-31 139.8 157 52.2
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 7.1e-31 137.9 122 63.9
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.2e-30 137.1 152 55.9
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.7e-30 136.0 147 52.4
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 6.0e-30 134.8 159 47.2
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 6.0e-30 134.8 189 45.0
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.3e-29 133.7 170 49.4
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.3e-29 132.9 174 48.9
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.3e-29 132.9 162 49.4
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 5.1e-29 131.7 165 49.1
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.9e-28 129.8 157 49.7
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 2.5e-28 129.4 166 48.2
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 7.3e-28 127.9 143 52.4
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 4.8e-27 125.2 162 50.0
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.4e-26 123.6 142 47.2
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 5.3e-26 121.7 166 47.0
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.2e-25 120.6 167 48.5
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.0e-25 119.8 167 47.9
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.6e-25 119.4 158 51.3
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 7.6e-25 117.9 166 47.0
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 9.9e-25 117.5 158 50.6
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 9.9e-25 117.5 147 46.9
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 2.2e-24 116.3 161 46.0
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.9e-24 115.9 145 49.7
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.9e-24 115.9 167 46.1
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 8.4e-24 114.4 147 46.9
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 8.4e-24 114.4 145 49.0
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.1e-23 114.0 145 48.3
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.9e-23 113.2 162 42.6
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.9e-23 113.2 162 42.6
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 7.9e-22 107.8 162 43.8
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 6.7e-21 104.8 138 45.7
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 8.7e-21 104.4 158 43.7
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 8.7e-21 104.4 152 44.1
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.9e-20 103.2 160 41.9
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.9e-20 103.2 161 39.1
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 2.5e-20 102.8 96 60.4
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 2.5e-20 102.8 96 60.4
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 3.3e-20 102.4 166 41.6
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 5.6e-20 101.7 137 46.7
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 9.6e-20 100.9 167 44.9
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 2.1e-19 99.8 133 48.1
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 2.8e-19 99.4 161 43.5
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 4.8e-19 98.6 133 48.1
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 4.8e-19 98.6 133 45.1
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 6.2e-19 98.2 116 53.4
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 1.1e-18 97.4 166 42.8
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 1.1e-18 97.4 167 46.7
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 1.4e-18 97.1 161 42.9
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.8e-18 96.7 144 43.8
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.8e-18 96.7 161 42.2
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 2.4e-18 96.3 162 43.8
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 3.1e-18 95.9 154 41.6
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 5.3e-18 95.1 146 43.2
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 5.3e-18 95.1 154 40.9
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 9.0e-18 94.4 154 40.9
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-17 94.0 162 42.6
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 1.2e-17 94.0 162 42.6
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 1.2e-17 94.0 165 38.2
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 3.4e-17 92.4 154 40.3
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 1.7e-16 90.1 161 40.4
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 2.9e-16 89.4 123 43.9
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 2.9e-16 89.4 154 40.3
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 3.8e-16 89.0 132 40.2
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 1.1e-15 87.4 167 41.3
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 1.1e-15 87.4 167 41.3
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 1.4e-15 87.0 139 40.3
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 2.7e-14 82.8 126 42.9
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.5e-14 82.4 167 42.5
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.3e-13 80.5 171 38.0
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.0e-13 79.3 166 39.8
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 3.9e-13 79.0 135 40.0
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 6.7e-13 78.2 166 39.2
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 6.7e-13 78.2 167 41.9
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 6.7e-13 78.2 167 41.9
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 8.7e-13 77.8 143 42.0
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 8.7e-13 77.8 160 41.9
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 1.1e-12 77.4 59 71.2
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 1.5e-12 77.0 169 34.3
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 1.9e-12 76.6 172 34.3
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 3.7e-11 72.4 166 36.1
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 8.1e-11 71.2 75 56.0
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 1.8e-10 70.1 91 47.3
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 3.1e-10 69.3 81 50.6
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 9.0e-10 67.8 135 36.3
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 9.0e-10 67.8 86 61.6
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.0e-08 64.3 92 42.4
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 2.9e-08 62.8 62 54.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 5.5e-07 58.5 150 26.7


User provided reference genes

Program Settings