Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002162g0050 Nicotiana tabacum HOM05D063853 ORTHO05D049408 1.5e-59 233.0 156 100.0
Nitab4.5_0003509g0030 Nicotiana tabacum HOM05D063853 ORTHO05D049408 2.4e-20 102.8 111 82.9
CAN.G1267.1 Capsicum annuum HOM05D016353 ORTHO05D017748 6.1e-16 88.2 55 78.2
Haze_19486 Corylus avellana HOM05D000021 ORTHO05D012344 3.2e-09 65.9 56 46.4
RcHm_v2.0_Chr7g0213311 Rosa chinensis HOM05D018904 ORTHO05D016947 3.2e-09 65.9 56 44.6
Cc11_g02190 Coffea canephora HOM05D000021 ORTHO05D000010 5.5e-09 65.1 56 48.2
CAN.G1286.25 Capsicum annuum HOM05D000021 ORTHO05D000010 1.8e-07 60.1 56 48.2
Cc11_g07890 Coffea canephora HOM05D000021 ORTHO05D000010 1.8e-07 60.1 48 50.0
RcHm_v2.0_Chr2g0115751 Rosa chinensis HOM05D000021 ORTHO05D018334 2.3e-07 59.7 50 46.0
Actinidia35591 Actinidia chinensis HOM05D051883 ORTHO05D015223 3.0e-07 59.3 52 53.8
CAN.G354.5 Capsicum annuum HOM05D000021 ORTHO05D000010 3.0e-07 59.3 56 50.0
CAN.G525.60 Capsicum annuum HOM05D000021 ORTHO05D000010 4.0e-07 58.9 50 54.0
Cc11_g07850 Coffea canephora HOM05D000021 ORTHO05D000010 5.2e-07 58.5 50 54.0
MD05G1298300 Malus domestica HOM05D000021 ORTHO05D000010 1.2e-06 57.4 52 46.2
Gorai.009G364900 Gossypium raimondii HOM05D000021 ORTHO05D000010 2.0e-06 56.6 44 56.8
RcHm_v2.0_Chr2g0113631 Rosa chinensis HOM05D000021 ORTHO05D000010 2.0e-06 56.6 52 46.2
Cc02_g15250 Coffea canephora HOM05D000021 ORTHO05D000010 2.6e-06 56.2 49 53.1
MD07G1035900 Malus domestica HOM05D000021 ORTHO05D000010 2.6e-06 56.2 50 48.0
PGSC0003DMG400007758 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.6e-06 56.2 48 54.2
Nitab4.5_0001288g0090 Nicotiana tabacum HOM05D000021 ORTHO05D000010 4.4e-06 55.5 38 71.1
RcHm_v2.0_Chr2g0113671 Rosa chinensis HOM05D000021 ORTHO05D000010 4.4e-06 55.5 52 44.2
Cc09_g05670 Coffea canephora HOM05D000021 ORTHO05D000010 5.7e-06 55.1 53 49.1
Solyc06g006024.1 Solanum lycopersicum HOM05D000021 ORTHO05D000010 5.7e-06 55.1 31 80.6
COL.COLO4_27016 Corchorus olitorius HOM05D000021 ORTHO05D000010 7.5e-06 54.7 53 41.5
RcHm_v2.0_Chr2g0113871 Rosa chinensis HOM05D000021 ORTHO05D000010 9.7e-06 54.3 50 42.0
PGSC0003DMG400006065 Solanum tuberosum HOM05D000021 ORTHO05D000010 9.7e-06 54.3 50 50.0


User provided reference genes

Program Settings