Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002161g0070 Nicotiana tabacum HOM05D007713 ORTHO05D009748 3.2e-147 525.0 256 100.0
Nitab4.5_0002567g0140 Nicotiana tabacum HOM05D007713 ORTHO05D009748 1.9e-144 515.8 256 98.4
Sopen11g029730 Solanum pennellii HOM05D007713 ORTHO05D009748 4.2e-131 471.5 259 86.1
Peaxi162Scf00978g00032 Petunia axillaris HOM05D007713 ORTHO05D009748 2.1e-122 442.6 258 83.3
PGSC0003DMG400027417 Solanum tuberosum HOM05D007713 ORTHO05D009748 2.0e-120 436.0 259 81.1
Cc01_g07320 Coffea canephora HOM05D007713 ORTHO05D009748 2.3e-113 412.5 260 76.2
SGA_v2.0_scaffold8G04513 Striga asiatica HOM05D007713 ORTHO05D009748 4.1e-110 401.7 260 74.6
Lj2P811T4 Lonicera japonica HOM05D007713 ORTHO05D009748 1.6e-109 399.8 258 77.1
CSS0029086 Camellia sinensis var. sinensis HOM05D007713 ORTHO05D009748 5.0e-108 394.8 256 74.6
Hma1.2p1_0811F.1_g222080 Hydrangea macrophylla HOM05D007713 ORTHO05D009748 1.1e-107 393.7 261 75.1
Oeu047953.1 Olea europaea HOM05D007713 ORTHO05D009748 1.6e-106 389.8 256 75.4
Haze_23294 Corylus avellana HOM05D007713 ORTHO05D009748 3.6e-106 388.7 273 70.7
Haze_23299 Corylus avellana HOM05D007713 ORTHO05D009748 3.6e-106 388.7 273 70.7
TAR633G2062 Trochodendron aralioides HOM05D007713 ORTHO05D009748 4.0e-105 385.2 255 72.9
Lsat_1_v5_gn_2_31700 Lactuca sativa HOM05D007713 ORTHO05D009748 5.2e-105 384.8 254 72.0
Manes.02G135500 Manihot esculenta HOM05D007713 ORTHO05D009748 6.7e-105 384.4 261 72.4
Cfa009929 Carpinus fangiana HOM05D007713 ORTHO05D009748 2.0e-104 382.9 274 69.7
CiPaw.13G147100 Carya illinoinensis HOM05D007713 ORTHO05D009748 5.7e-104 381.3 267 70.4
Solyc11g072080.1 Solanum lycopersicum HOM05D007713 ORTHO05D009748 2.2e-103 379.4 212 84.9
CiPaw.12G120900 Carya illinoinensis HOM05D007713 ORTHO05D009748 1.1e-102 377.1 267 71.2
Dinv24613 Davidia involucrata HOM05D007713 ORTHO05D009748 2.4e-102 375.9 250 74.0
QL01p016194 Quercus lobata HOM05D007713 ORTHO05D009748 3.5e-101 372.1 271 68.6
PGR119G2462 Punica granatum HOM05D007713 ORTHO05D009748 4.5e-101 371.7 259 70.7
TAR636G2738 Trochodendron aralioides HOM05D007713 ORTHO05D009748 4.5e-101 371.7 255 68.2
TWI31G0070 Tripterygium wilfordii HOM05D007713 ORTHO05D009748 5.9e-101 371.3 257 70.8
MBI19_g04340_MAGBIO Magnolia biondii HOM05D007713 ORTHO05D009748 1.3e-100 370.2 255 70.6
Thecc.09G252200 Theobroma cacao HOM05D007713 ORTHO05D009748 1.1e-99 367.1 264 68.9
EL10Ac4g10074 Beta vulgaris HOM05D007713 ORTHO05D009748 1.9e-99 366.3 255 71.0
Duzib168G2333 Durio zibethinus HOM05D007713 ORTHO05D009748 5.5e-99 364.8 264 69.3
Ah.06g194890 Amaranthus hybridus HOM05D007713 ORTHO05D009748 7.2e-99 364.4 255 71.0
Cpa.g.sc36.103 Carica papaya HOM05D007713 ORTHO05D009748 1.6e-98 363.2 265 68.7
PSO765G0028 Papaver somniferum HOM05D007713 ORTHO05D009748 1.6e-98 363.2 267 66.7
Sed0009065 Sechium edule HOM05D007713 ORTHO05D009748 3.6e-98 362.1 271 66.1
AUR62000228 Chenopodium quinoa HOM05D007713 ORTHO05D009748 6.1e-98 361.3 255 70.2
AUR62006574 Chenopodium quinoa HOM05D007713 ORTHO05D009748 1.4e-97 360.1 256 69.9
Potri.009G066500 Populus trichocarpa HOM05D007713 ORTHO05D009748 1.4e-97 360.1 263 68.1
HanXRQChr03g0080051 Helianthus annuus HOM05D007713 ORTHO05D009748 8.8e-97 357.5 254 68.9
Thhalv10004305m.g Eutrema salsugineum HOM05D007713 ORTHO05D009748 1.2e-96 357.1 257 68.1
Gohir.D07G123200 Gossypium hirsutum HOM05D007713 ORTHO05D009748 1.2e-96 357.1 267 67.4
Actinidia06981 Actinidia chinensis HOM05D007713 ORTHO05D009748 1.5e-96 356.7 248 71.0
COL.COLO4_33248 Corchorus olitorius HOM05D007713 ORTHO05D009748 1.5e-96 356.7 265 66.4
PSO349G0341 Papaver somniferum HOM05D007713 ORTHO05D009748 2.0e-96 356.3 267 65.9
ECA233G2058 Erigeron canadensis HOM05D007713 ORTHO05D009748 2.6e-96 355.9 259 68.7
Gorai.001G132900 Gossypium raimondii HOM05D007713 ORTHO05D009748 3.4e-96 355.5 267 67.0
A09p05580 Brassica napus HOM05D007713 ORTHO05D009748 7.5e-96 354.4 258 68.6
BraA09t36199Z Brassica rapa HOM05D007713 ORTHO05D009748 7.5e-96 354.4 258 68.6
Potri.001G271900 Populus trichocarpa HOM05D007713 ORTHO05D009748 7.5e-96 354.4 259 68.3
MELO3C015613.2 Cucumis melo HOM05D007713 ORTHO05D009748 9.8e-96 354.0 267 64.8
CsaV3_1G041980 Cucumis sativus L. HOM05D007713 ORTHO05D009748 9.8e-96 354.0 267 64.8
Sp2g21080 Schrenkiella parvula HOM05D007713 ORTHO05D009748 9.8e-96 354.0 257 67.3
Gohir.A07G118900 Gossypium hirsutum HOM05D007713 ORTHO05D009748 1.7e-95 353.2 265 67.2
ClCG03G014250 Citrullus lanatus HOM05D007713 ORTHO05D009748 2.2e-95 352.8 272 64.3
BcaC04g23665 Brassica carinata HOM05D007713 ORTHO05D009748 4.8e-95 351.7 258 68.2
C09p06140 Brassica napus HOM05D007713 ORTHO05D009748 4.8e-95 351.7 258 68.2
BcaB04g19704 Brassica carinata HOM05D007713 ORTHO05D009748 8.3e-95 350.9 258 67.8
BolC9t53535H Brassica oleracea HOM05D007713 ORTHO05D009748 1.8e-94 349.7 258 68.2
Sabra16G0167200 Salix brachista HOM05D007713 ORTHO05D009748 1.8e-94 349.7 261 66.7
Lalb_Chr07g0188901 Lupinus albus HOM05D007713 ORTHO05D009748 3.1e-94 349.0 261 66.7
Aa31LG11G9740 Aethionema arabicum HOM05D007713 ORTHO05D009748 7.0e-94 347.8 257 66.1
Rhsim13G0203800 Rhododendron simsii HOM05D007713 ORTHO05D009748 2.7e-93 345.9 261 67.8
Carub.0006s2459 Capsella rubella HOM05D007713 ORTHO05D009748 4.5e-93 345.1 259 66.8
Aqoxy1G02561 Aquilegia oxysepala HOM05D007713 ORTHO05D009748 3.8e-92 342.0 268 63.8
Ca_26656_v3 Cicer arietinum L. HOM05D007713 ORTHO05D009748 1.1e-91 340.5 260 65.8
AT5G26960 Arabidopsis thaliana HOM05D007713 ORTHO05D009748 2.5e-91 339.3 259 64.9
AL6G38870 Arabidopsis lyrata HOM05D007713 ORTHO05D009748 4.2e-91 338.6 259 65.3
Atru.chr3.2844 Acer truncatum HOM05D007713 ORTHO05D009748 1.6e-90 336.7 259 64.9
Lj6g0023778 Lotus japonicus HOM05D007713 ORTHO05D009748 2.1e-90 336.3 267 65.9
CARHR186580 Cardamine hirsuta HOM05D007713 ORTHO05D009748 1.8e-89 333.2 260 63.8
Glyma.20G045100 Glycine max HOM05D007713 ORTHO05D009748 5.9e-85 318.2 268 61.9
Phvul.006G018200 Phaseolus vulgaris HOM05D007713 ORTHO05D009748 2.8e-82 309.3 259 61.4
Medtr3g045210 Medicago truncatula HOM05D007713 ORTHO05D009748 1.4e-81 307.0 258 58.9
TPR.G11930 Trifolium pratense HOM05D007713 ORTHO05D009748 5.8e-80 301.6 264 57.2
VMungo0540G1337 Vigna mungo HOM05D007713 ORTHO05D009748 1.7e-79 300.1 256 60.5
Ciclev10015393m.g Citrus clementina HOM05D007713 ORTHO05D009748 2.6e-72 276.2 257 56.4
Sc16g0010880 Simmondsia chinensis HOM05D007713 ORTHO05D009748 2.4e-70 269.6 243 57.2
Migut.D00708 Erythranthe guttata HOM05D007713 ORTHO05D009748 3.2e-70 269.2 221 64.7
THA.LOC104805019 Tarenaya hassleriana HOM05D007713 ORTHO05D009748 8.6e-68 261.2 263 52.9
SEGI_24675 Sequoiadendron giganteum HOM05D007713 ORTHO05D009748 2.2e-63 246.5 259 48.3
SEGI_20329 Sequoiadendron giganteum HOM05D007713 ORTHO05D009748 8.3e-63 244.6 259 47.5
Os11g0138700 Oryza sativa ssp. japonica HOM05D007713 ORTHO05D009748 2.1e-61 240.0 260 50.0
Os12g0135200 Oryza sativa ssp. japonica HOM05D007713 ORTHO05D009748 1.7e-60 236.9 260 49.2
Mapoly0014s0086 Marchantia polymorpha HOM05D007713 ORTHO05D009748 1.1e-59 234.2 259 46.3
SMO116G0438 Selaginella moellendorffii HOM05D007713 ORTHO05D009748 1.2e-58 230.7 261 44.4
Zm00001eb196340 Zea mays HOM05D007713 ORTHO05D009748 1.1e-57 227.6 259 49.4
CAN.G280.7 Capsicum annuum HOM05D007713 ORTHO05D009748 3.1e-57 226.1 256 50.4
Pp3c12_25210 Physcomitrium patens HOM05D007713 ORTHO05D009748 3.1e-57 226.1 260 46.5
GSVIVG01037395001 Vitis vinifera HOM05D007713 ORTHO05D009748 5.2e-57 225.3 162 67.3
Pp3c4_2880 Physcomitrium patens HOM05D007713 ORTHO05D009748 3.2e-54 216.1 260 45.0
Nn7g36950 Nelumbo nucifera HOM05D007713 ORTHO05D009748 9.3e-38 161.4 131 64.1
HPP92_018395 Vanilla planifolia HOM05D007713 ORTHO05D009748 1.4e-25 120.9 148 45.9
ATR0307G040 Amborella trichopoda HOM05D007713 ORTHO05D009748 2.0e-24 117.1 308 28.6
Mapoly0057s0100 Marchantia polymorpha HOM05D000667 ORTHO05D003095 7.9e-13 78.6 192 31.8
AagrBONN_evm.TU.Sc2ySwM_344.5202 Anthoceros agrestis HOM05D000667 ORTHO05D003095 4.8e-10 69.3 137 35.8
HanXRQChr05g0140521 Helianthus annuus HOM05D007183 ORTHO05D008829 1.0e-07 61.6 121 33.1
ATR0796G263 Amborella trichopoda HOM05D007183 ORTHO05D003095 2.2e-07 60.5 104 30.8
Pp3c22_21630 Physcomitrium patens HOM05D000667 ORTHO05D003843 2.2e-07 60.5 103 32.0
PGR004G0270 Punica granatum HOM05D007183 ORTHO05D008829 2.2e-07 60.5 124 34.7
ClCG02G001190 Citrullus lanatus HOM05D007183 ORTHO05D008829 2.9e-07 60.1 108 33.3
Potri.010G004500 Populus trichocarpa HOM05D000667 ORTHO05D003095 2.9e-07 60.1 174 27.6
Sed0026806 Sechium edule HOM05D007183 ORTHO05D008829 2.9e-07 60.1 108 35.2
FAN07G0487 Fragaria x ananassa HOM05D000667 ORTHO05D003095 8.5e-07 58.5 111 33.3
FAN12G3400 Fragaria x ananassa HOM05D000667 ORTHO05D003095 2.5e-06 57.0 161 29.2
FvH4_4g21831 Fragaria vesca HOM05D000667 ORTHO05D003095 3.2e-06 56.6 111 32.4
FAN17G1110 Fragaria x ananassa HOM05D000667 ORTHO05D003095 3.2e-06 56.6 111 32.4
SEGI_10708 Sequoiadendron giganteum HOM05D000667 ORTHO05D003095 3.2e-06 56.6 68 44.1
TWI63G1715 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 3.2e-06 56.6 106 37.7
unitig_52.g17192 Utricularia gibba HOM05D000667 ORTHO05D003843 3.2e-06 56.6 66 43.9
CiPaw.01G126800 Carya illinoinensis HOM05D000667 ORTHO05D003095 4.2e-06 56.2 124 31.5
Thecc.06G194600 Theobroma cacao HOM05D007183 ORTHO05D008829 5.5e-06 55.8 126 34.1
Zm00001eb241600 Zea mays HOM05D000667 ORTHO05D003843 7.2e-06 55.5 183 29.0


User provided reference genes

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