Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.4e-197 691.4 333 100.0
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.2e-155 551.6 312 84.3
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 4.2e-155 551.6 316 84.2
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 9.2e-155 550.4 316 83.9
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.6e-154 548.1 314 84.1
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.0e-153 547.0 316 83.9
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.0e-153 545.4 312 83.7
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 3.9e-153 545.0 312 83.0
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 5.1e-153 544.7 312 83.0
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 8.7e-153 543.9 312 83.0
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.4e-150 536.6 316 81.0
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 3.4e-149 531.9 316 80.1
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 3.4e-149 531.9 316 80.1
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.9e-148 528.9 316 80.7
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 2.9e-148 528.9 316 80.4
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 7.1e-147 524.2 310 80.6
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 9.3e-147 523.9 310 79.4
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 1.2e-146 523.5 316 79.1
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 4.6e-146 521.5 316 78.8
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 7.8e-146 520.8 308 80.2
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.7e-145 519.6 311 80.4
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.0e-145 518.8 304 80.9
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.9e-145 518.5 305 81.0
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 5.1e-145 518.1 312 79.8
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 6.6e-145 517.7 305 80.3
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 1.1e-144 516.9 305 81.3
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.1e-144 516.9 318 78.9
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 2.5e-144 515.8 310 79.7
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 5.6e-144 514.6 310 79.7
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 5.6e-144 514.6 310 79.7
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 9.6e-144 513.8 316 78.5
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.6e-143 513.1 305 80.3
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.6e-143 513.1 316 78.8
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 2.8e-143 512.3 316 78.2
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 8.1e-143 510.8 310 78.1
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 8.1e-143 510.8 312 77.6
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 1.1e-142 510.4 312 77.6
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 1.8e-142 509.6 316 78.2
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.4e-142 509.2 310 78.1
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 2.4e-142 509.2 309 78.6
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 3.1e-142 508.8 274 86.5
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 3.1e-142 508.8 310 78.1
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 4.0e-142 508.4 309 78.6
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 5.3e-142 508.1 304 79.9
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 5.3e-142 508.1 309 78.3
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 9.0e-142 507.3 309 77.7
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.2e-141 506.9 305 79.3
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 1.5e-141 506.5 312 76.6
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 2.6e-141 505.8 304 78.9
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 3.4e-141 505.4 304 78.9
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 4.5e-141 505.0 316 76.6
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 5.8e-141 504.6 307 77.9
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 7.6e-141 504.2 307 79.2
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.3e-140 503.4 307 78.8
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 1.7e-140 503.1 307 78.5
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.9e-140 502.3 310 76.8
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.9e-140 502.3 310 76.8
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 3.8e-140 501.9 307 78.8
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.8e-140 501.9 307 78.8
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 4.9e-140 501.5 307 78.8
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 4.9e-140 501.5 307 76.9
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 4.9e-140 501.5 313 77.3
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 4.9e-140 501.5 316 78.2
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 8.4e-140 500.7 307 77.9
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 1.1e-139 500.4 318 77.4
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.1e-139 500.4 304 78.3
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.4e-139 500.0 310 76.5
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 1.9e-139 499.6 305 79.0
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 7.1e-139 497.7 307 76.5
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 9.3e-139 497.3 315 75.2
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.6e-138 496.5 307 78.2
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 2.1e-138 496.1 306 77.8
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.7e-138 495.7 360 68.3
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 6.0e-138 494.6 316 75.6
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 7.9e-138 494.2 312 75.0
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.3e-137 493.4 305 78.0
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.8e-137 493.0 305 76.7
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 1.8e-137 493.0 307 76.9
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 3.0e-137 492.3 305 77.7
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 5.1e-137 491.5 304 77.0
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 6.7e-137 491.1 305 77.4
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.1e-136 490.3 305 78.0
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.9e-136 489.6 307 76.2
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 2.5e-136 489.2 307 75.6
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 2.5e-136 489.2 313 74.8
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 5.6e-136 488.0 307 76.2
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 7.4e-136 487.6 312 74.0
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 7.4e-136 487.6 318 74.2
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 7.4e-136 487.6 318 74.2
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 1.3e-135 486.9 317 74.1
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 1.3e-135 486.9 307 76.2
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 2.8e-135 485.7 307 73.9
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 4.8e-135 485.0 317 73.8
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 4.8e-135 485.0 317 73.8
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 8.1e-135 484.2 310 74.5
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 1.4e-134 483.4 310 74.8
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 1.4e-134 483.4 310 74.8
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 1.4e-134 483.4 308 75.0
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 2.4e-134 482.6 308 75.0
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 5.3e-134 481.5 307 74.9
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 5.3e-134 481.5 294 79.3
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 3.4e-133 478.8 317 72.9
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 3.4e-133 478.8 317 72.9
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 9.9e-133 477.2 317 73.5
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 1.3e-132 476.9 309 73.5
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 2.2e-132 476.1 307 74.6
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 2.1e-130 469.5 311 73.0
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 7.9e-130 467.6 308 72.1
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 2.3e-129 466.1 313 72.2
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 4.3e-128 461.8 327 70.3
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.3e-127 460.3 338 66.3
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 5.8e-125 451.4 269 80.3
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.9e-123 446.4 291 73.9
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 1.3e-119 433.7 249 79.9
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 6.3e-119 431.4 312 65.7
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.0e-117 426.4 306 65.0
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.0e-117 426.4 306 65.0
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 4.2e-115 418.7 301 63.8
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.7e-114 416.0 312 63.8
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 1.4e-110 403.7 328 62.8
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.4e-102 376.3 301 57.8
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 6.3e-95 351.7 310 54.2
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 8.2e-95 351.3 219 78.1
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 3.0e-81 306.2 211 70.6
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 4.0e-81 305.8 306 51.0
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 1.1e-78 297.7 237 62.0
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.4e-70 270.8 342 42.4
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 7.0e-62 241.9 360 37.5
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 4.3e-51 206.1 122 75.4
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 1.4e-22 111.3 92 65.2
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.0e-20 103.6 83 66.3
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 5.6e-19 99.4 63 74.6
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 8.1e-18 95.5 79 64.6


User provided reference genes

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