Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.3e-96 354.0 191 100.0
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 3.4e-69 265.4 199 79.9
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 3.1e-54 215.7 123 90.2
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 4.5e-53 211.8 123 89.4
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 7.6e-53 211.1 123 88.6
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 6.5e-52 208.0 123 87.8
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 5.5e-51 204.9 123 86.2
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 9.3e-51 204.1 121 86.8
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 2.2e-44 183.0 120 76.7
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 3.8e-44 182.2 142 70.4
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 8.5e-44 181.0 121 76.9
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.9e-43 179.9 121 75.2
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.5e-43 179.5 117 77.8
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 3.2e-43 179.1 116 81.0
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 5.5e-43 178.3 118 78.0
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 3.6e-42 175.6 152 63.2
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 6.1e-42 174.9 124 74.2
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 7.9e-42 174.5 101 86.1
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 1.0e-41 174.1 120 75.0
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.8e-41 173.3 95 92.6
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 3.0e-41 172.6 117 75.2
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 6.7e-41 171.4 120 75.8
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 6.7e-41 171.4 110 81.8
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.1e-40 170.6 100 84.0
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 1.5e-40 170.2 124 75.8
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 3.3e-40 169.1 117 72.6
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 3.3e-40 169.1 99 85.9
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 3.3e-40 169.1 121 73.6
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 5.7e-40 168.3 122 73.8
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 5.7e-40 168.3 103 83.5
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 9.7e-40 167.5 102 86.3
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.3e-39 167.2 102 85.3
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.6e-39 166.8 98 84.7
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.6e-39 166.8 103 82.5
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 2.8e-39 166.0 114 72.8
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 2.8e-39 166.0 118 72.0
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 4.8e-39 165.2 119 72.3
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 6.3e-39 164.9 98 82.7
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 8.2e-39 164.5 143 63.6
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 1.4e-38 163.7 173 54.9
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.8e-38 163.3 123 71.5
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 1.8e-38 163.3 98 83.7
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.4e-38 162.9 122 73.0
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.4e-38 162.9 118 73.7
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 3.1e-38 162.5 97 82.5
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 4.1e-38 162.2 125 68.8
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 4.1e-38 162.2 123 71.5
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 4.1e-38 162.2 118 71.2
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 5.3e-38 161.8 110 75.5
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 9.1e-38 161.0 127 69.3
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 9.1e-38 161.0 123 65.9
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 9.1e-38 161.0 121 67.8
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 1.2e-37 160.6 103 81.6
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 2.6e-37 159.5 118 68.6
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 2.6e-37 159.5 123 67.5
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 3.4e-37 159.1 118 68.6
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 7.7e-37 157.9 136 64.7
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 1.7e-36 156.8 121 67.8
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 2.9e-36 156.0 117 67.5
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 5.0e-36 155.2 121 66.9
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 6.5e-36 154.8 118 66.9
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 8.5e-36 154.5 121 66.9
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 1.1e-35 154.1 116 70.7
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.4e-35 153.7 97 83.5
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 3.2e-35 152.5 105 72.4
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 3.2e-35 152.5 105 72.4
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 3.2e-35 152.5 126 64.3
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 5.5e-35 151.8 98 76.5
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 7.2e-35 151.4 98 76.5
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 9.4e-35 151.0 125 63.2
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 9.4e-35 151.0 99 77.8
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 1.6e-34 150.2 118 64.4
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 2.7e-34 149.4 102 77.5
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 4.6e-34 148.7 100 76.0
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 6.1e-34 148.3 126 59.5
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 6.1e-34 148.3 126 59.5
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 6.1e-34 148.3 118 62.7
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.8e-33 146.7 126 58.7
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 1.8e-33 146.7 116 69.0
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 8.8e-33 144.4 117 70.1
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 3.7e-31 139.0 120 64.2
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 3.7e-31 139.0 120 64.2
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 2.4e-30 136.3 96 71.9
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 3.1e-30 136.0 102 69.6
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.5e-29 133.7 87 79.3
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 4.5e-29 132.1 130 58.5
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 5.9e-29 131.7 119 59.7
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 5.0e-28 128.6 208 42.8
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 1.1e-27 127.5 121 55.4
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 1.2e-26 124.0 117 58.1
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.2e-26 124.0 103 64.1
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.2e-26 124.0 98 64.3
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 4.7e-26 122.1 119 53.8
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 6.1e-26 121.7 105 56.2
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.1e-22 110.9 118 52.5
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 2.4e-22 109.8 100 59.0
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 2.4e-22 109.8 111 55.0
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.4e-22 109.8 100 59.0
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 2.4e-22 109.8 100 59.0
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 2.4e-22 109.8 111 55.0
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 5.3e-22 108.6 111 55.0
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 9.1e-22 107.8 62 88.7
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.2e-21 107.5 111 53.2
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 1.6e-21 107.1 98 58.2
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 2.6e-21 106.3 118 50.8
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.0e-20 104.4 118 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 2.2e-20 103.2 102 49.0
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 2.2e-20 103.2 111 51.4
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 1.9e-19 100.1 86 62.8
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 2.7e-18 96.3 118 42.4
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 3.6e-18 95.9 62 79.0
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 6.1e-18 95.1 66 71.2
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 1.8e-17 93.6 123 41.5
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 4.4e-16 89.0 53 84.9
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 7.5e-16 88.2 64 68.8
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 9.7e-16 87.8 64 68.8
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 1.3e-15 87.4 64 68.8
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.1e-14 84.3 62 77.4
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 2.0e-13 80.1 54 72.2
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 2.7e-13 79.7 124 38.7
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.2e-12 76.6 53 71.7
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.2e-12 76.6 53 71.7
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 2.9e-12 76.3 65 61.5
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 4.2e-11 72.4 118 41.5
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.5e-11 72.0 57 63.2
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 8.0e-10 68.2 62 54.8
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 3.0e-09 66.2 45 73.3
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 1.5e-08 63.9 66 45.5
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.4e-08 62.8 78 48.7
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 9.8e-08 61.2 75 42.7
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.8e-07 59.7 43 60.5
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.3e-07 58.5 62 51.6


User provided reference genes

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