Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.7e-235 818.9 407 100.0
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 2.7e-172 609.0 407 77.6
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 7.3e-170 600.9 407 76.4
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.3e-168 595.9 388 80.9
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 3.4e-167 592.0 407 75.7
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.8e-137 492.7 407 63.9
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 2.2e-134 483.0 406 62.8
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 4.6e-132 475.3 397 63.7
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.3e-131 473.8 407 63.1
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.3e-131 473.8 408 62.0
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 3.0e-131 472.6 407 61.4
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 3.9e-131 472.2 399 62.4
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 3.9e-131 472.2 407 62.4
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 8.7e-131 471.1 405 62.2
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 8.7e-131 471.1 407 62.2
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.7e-131 471.1 412 60.7
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.7e-131 471.1 412 60.7
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 4.3e-130 468.8 407 61.7
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 7.4e-130 468.0 408 60.5
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 9.6e-130 467.6 407 61.7
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 9.6e-130 467.6 407 60.4
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.3e-129 467.2 407 60.7
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.3e-129 467.2 407 62.2
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.6e-129 466.8 397 63.2
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 2.8e-129 466.1 402 62.2
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 3.7e-129 465.7 412 61.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.7e-129 465.7 407 60.2
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 4.8e-129 465.3 407 62.9
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 8.2e-129 464.5 406 59.9
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.4e-128 463.8 405 61.5
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.4e-128 463.8 413 60.3
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 4.0e-128 462.2 407 60.9
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 5.3e-128 461.8 406 61.6
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.2e-127 460.7 405 60.5
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.2e-127 460.7 408 61.5
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.5e-127 460.3 408 62.0
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.5e-127 460.3 407 59.2
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 3.4e-127 459.1 407 60.4
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 1.0e-126 457.6 407 61.4
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.9e-126 456.1 407 61.2
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 3.8e-126 455.7 411 59.4
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 8.4e-126 454.5 406 59.1
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 8.4e-126 454.5 399 61.4
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-125 453.4 410 58.8
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.5e-125 453.0 408 59.6
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 9.3e-125 451.1 404 59.2
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 3.5e-124 449.1 407 58.5
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 4.6e-124 448.7 404 58.9
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.8e-123 446.8 405 58.8
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 6.7e-123 444.9 398 59.3
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 6.7e-123 444.9 409 59.7
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 2.5e-122 443.0 405 57.5
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.3e-121 440.7 448 54.5
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.6e-121 440.3 401 58.9
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.2e-121 439.9 407 57.5
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.4e-120 436.4 398 58.5
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 2.4e-120 436.4 408 58.3
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 5.3e-120 435.3 389 58.9
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.5e-119 433.7 401 57.9
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.5e-119 433.7 404 58.4
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.0e-119 433.3 397 58.2
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 2.6e-119 433.0 402 57.5
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 4.5e-119 432.2 405 57.5
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.0e-118 431.0 401 56.9
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 1.3e-118 430.6 401 56.4
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.2e-118 429.9 401 56.1
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 2.2e-118 429.9 402 56.5
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 8.5e-118 427.9 401 56.9
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 8.5e-118 427.9 401 56.9
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.4e-117 427.2 404 57.4
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 3.2e-117 426.0 401 55.9
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 3.2e-117 426.0 402 56.7
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 4.2e-117 425.6 401 55.9
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 7.2e-117 424.9 408 57.6
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 9.4e-117 424.5 397 57.7
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.1e-116 423.3 376 61.7
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 2.7e-116 422.9 402 56.0
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 7.9e-116 421.4 398 57.8
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.4e-115 420.6 379 59.6
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 1.1e-114 417.5 382 60.2
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.5e-114 417.2 488 49.0
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 4.3e-114 415.6 413 54.7
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 7.4e-114 414.8 403 54.8
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.2e-113 413.3 401 54.9
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 2.8e-113 412.9 308 71.1
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.8e-113 412.1 382 60.2
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.1e-112 411.0 402 55.0
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.4e-112 410.6 397 56.2
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 9.1e-112 407.9 403 52.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.2e-111 407.5 380 57.4
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.3e-110 404.1 299 71.6
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 3.8e-110 402.5 406 54.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 8.5e-110 401.4 403 52.4
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 2.5e-109 399.8 402 53.5
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 3.2e-109 399.4 357 61.6
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 7.9e-108 394.8 293 68.6
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 7.9e-108 394.8 274 72.3
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.0e-107 394.4 406 52.5
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 3.0e-107 392.9 274 71.2
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 3.9e-107 392.5 367 56.1
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 6.7e-107 391.7 406 52.7
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 6.7e-107 391.7 406 52.5
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 8.8e-107 391.3 274 71.9
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 7.4e-106 388.3 403 51.6
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.6e-100 370.5 305 65.6
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.6e-100 370.5 274 68.6
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 2.9e-94 349.7 360 55.0
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.5e-94 348.2 392 49.2
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 1.8e-91 340.5 355 53.8
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.6e-90 336.7 370 51.6
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.7e-89 332.8 403 46.2
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 2.4e-88 330.1 274 62.4
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 5.7e-82 308.9 393 44.8
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 4.7e-68 262.7 398 40.7
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 9.8e-66 255.0 361 42.9
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 2.3e-62 243.8 405 40.0
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.5e-58 231.1 492 32.9
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 8.3e-57 225.3 178 68.0
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 5.1e-54 216.1 251 51.4
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.2e-52 209.1 274 44.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.6e-50 203.8 211 54.0
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 1.3e-49 201.4 388 36.1
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.9e-49 199.5 246 50.0
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 9.2e-48 195.3 183 60.1
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-45 186.8 181 57.5
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.9e-40 171.0 250 44.8
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-24 117.9 207 38.6
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 4.0e-19 100.1 148 40.5
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 3.8e-17 93.6 172 35.5
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 1.6e-15 88.2 60 66.7
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.6e-15 88.2 72 54.2
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 7.4e-13 79.3 75 49.3
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.8e-09 67.0 83 45.8
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.9e-08 64.7 35 80.0
arahy.Tifrunner.gnm1.ann1.3Y4VDA Arachis hypogaea HOM05D000187 ORTHO05D000230 6.7e-06 56.2 26 88.5


User provided reference genes

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