Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 3.4e-65 251.5 126 100.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.9e-60 235.7 119 98.3
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 2.3e-58 228.8 119 94.1
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 6.4e-48 194.1 116 86.2
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.0e-45 186.8 116 82.8
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.3e-45 186.4 116 82.8
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 4.6e-38 161.4 120 73.3
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.3e-37 159.1 120 68.3
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.9e-36 156.0 120 67.5
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 2.5e-36 155.6 120 68.3
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 5.6e-36 154.5 120 70.0
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 7.3e-36 154.1 120 67.5
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 9.5e-36 153.7 120 67.5
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 9.5e-36 153.7 120 67.5
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.1e-35 152.5 120 67.5
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 4.7e-35 151.4 120 69.2
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 8.1e-35 150.6 122 67.2
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.1e-34 150.2 120 66.7
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 4.0e-34 148.3 120 66.7
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 4.0e-34 148.3 121 66.1
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 5.2e-34 147.9 122 63.1
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 6.8e-34 147.5 124 63.7
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 6.8e-34 147.5 120 68.3
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 6.8e-34 147.5 127 62.2
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 8.9e-34 147.1 122 65.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.2e-33 146.7 120 70.0
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 1.5e-33 146.4 119 63.9
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.0e-33 146.0 111 69.4
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 3.4e-33 145.2 120 65.0
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 4.4e-33 144.8 133 63.9
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.8e-33 144.4 126 65.1
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 5.8e-33 144.4 129 63.6
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 7.6e-33 144.1 119 63.9
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 7.6e-33 144.1 130 63.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 9.9e-33 143.7 122 66.4
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 9.9e-33 143.7 124 64.5
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 9.9e-33 143.7 118 66.9
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.3e-32 143.3 120 63.3
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.3e-32 143.3 122 66.4
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 1.7e-32 142.9 119 65.5
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.7e-32 142.9 120 64.2
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.2e-32 142.5 122 65.6
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.2e-32 142.5 122 65.6
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.9e-32 142.1 121 66.1
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 4.9e-32 141.4 107 69.2
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 4.9e-32 141.4 122 64.8
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 8.4e-32 140.6 83 83.1
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 8.4e-32 140.6 81 84.0
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 8.4e-32 140.6 81 84.0
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 8.4e-32 140.6 81 84.0
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.1e-31 140.2 122 64.8
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.9e-31 139.4 123 61.8
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.9e-31 139.4 115 64.3
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.9e-31 139.4 119 63.9
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 2.4e-31 139.0 127 62.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 2.4e-31 139.0 120 62.5
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 3.2e-31 138.7 119 65.5
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 4.1e-31 138.3 124 62.1
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 5.4e-31 137.9 125 63.2
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.6e-30 136.3 118 62.7
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 1.6e-30 136.3 127 63.0
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 2.1e-30 136.0 126 61.1
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 2.1e-30 136.0 95 69.5
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 2.1e-30 136.0 103 68.0
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 2.7e-30 135.6 123 59.3
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 4.6e-30 134.8 127 60.6
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 4.6e-30 134.8 120 62.5
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 1.3e-29 133.3 123 61.8
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.3e-29 133.3 128 60.2
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 1.7e-29 132.9 126 62.7
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 3.0e-29 132.1 127 57.5
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 3.9e-29 131.7 100 69.0
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 6.6e-29 131.0 98 69.4
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 1.5e-28 129.8 113 65.5
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.9e-28 129.4 123 56.9
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 1.9e-28 129.4 74 85.1
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 2.5e-28 129.0 124 58.1
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 4.3e-28 128.3 125 58.4
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 4.3e-28 128.3 125 58.4
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 4.3e-28 128.3 77 83.1
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 7.3e-28 127.5 163 47.2
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 9.6e-28 127.1 123 62.6
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.2e-27 126.7 73 86.3
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.4e-26 123.2 67 88.1
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 2.4e-26 122.5 69 81.2
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 2.4e-26 122.5 78 76.9
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 5.2e-26 121.3 125 56.0
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 2.0e-25 119.4 123 56.1
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 7.1e-23 110.9 107 56.1
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 1.2e-22 110.2 120 55.0
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 2.7e-22 109.0 71 73.2
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 3.5e-22 108.6 70 68.6
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 4.6e-22 108.2 71 74.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 6.2e-19 97.8 48 91.7
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.1e-18 97.1 49 91.8
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.7e-16 89.7 74 58.1
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.7e-14 82.4 131 38.9
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 2.2e-08 62.8 58 50.0
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 3.2e-07 58.9 74 52.7
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 7.9e-06 54.3 72 48.6


User provided reference genes

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