Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002152g0110 Nicotiana tabacum HOM05D003987 ORTHO05D004532 2.3e-205 718.8 398 100.0
Nitab4.5_0000008g0400 Nicotiana tabacum HOM05D003987 ORTHO05D004532 3.0e-168 595.5 466 77.3
Peaxi162Scf01302g00045 Petunia axillaris HOM05D003987 ORTHO05D004532 4.2e-130 468.8 520 59.2
PGSC0003DMG400020336 Solanum tuberosum HOM05D003987 ORTHO05D004532 5.5e-130 468.4 518 58.5
Sopen09g006640 Solanum pennellii HOM05D003987 ORTHO05D004532 2.6e-127 459.5 519 57.4
Nitab4.5_0017865g0010 Nicotiana tabacum HOM05D003987 ORTHO05D004532 1.9e-106 390.2 503 51.1
Nitab4.5_0000119g0280 Nicotiana tabacum HOM05D003987 ORTHO05D004532 7.3e-106 388.3 503 51.3
PGSC0003DMG400019132 Solanum tuberosum HOM05D003987 ORTHO05D004532 9.2e-101 371.3 517 47.4
Peaxi162Scf00014g00921 Petunia axillaris HOM05D003987 ORTHO05D004532 2.1e-97 360.1 522 49.2
Solyc09g011820.4 Solanum lycopersicum HOM05D003987 ORTHO05D004532 1.5e-90 337.4 451 51.9
Dinv35526 Davidia involucrata HOM05D003987 ORTHO05D004532 1.7e-86 323.9 479 49.9
Dinv37095 Davidia involucrata HOM05D003987 ORTHO05D004532 4.1e-85 319.3 525 45.9
Lj2A83T77 Lonicera japonica HOM05D003987 ORTHO05D004532 1.9e-82 310.5 522 40.4
CSS0027188 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 4.7e-81 305.8 522 43.1
Sopen10g036150 Solanum pennellii HOM05D003987 ORTHO05D004532 1.3e-78 297.7 525 41.1
CSS0029662 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 1.7e-78 297.4 505 42.0
Actinidia05340 Actinidia chinensis HOM05D003987 ORTHO05D004532 2.3e-75 287.0 516 40.3
GSVIVG01034033001 Vitis vinifera HOM05D003987 ORTHO05D004532 6.2e-73 278.9 510 43.5
SalBow3G0011 Salvia bowleyana HOM05D003987 ORTHO05D004532 8.1e-73 278.5 512 38.5
Oeu018344.1 Olea europaea HOM05D003987 ORTHO05D004532 6.9e-72 275.4 512 42.4
Atru.chr8.2120 Acer truncatum HOM05D003987 ORTHO05D004532 3.4e-71 273.1 487 44.1
Duzib093G0208 Durio zibethinus HOM05D003987 ORTHO05D004532 1.9e-69 267.3 501 43.1
Hma1.2p1_0244F.1_g101070 Hydrangea macrophylla HOM05D003987 ORTHO05D004532 4.2e-69 266.2 493 44.0
Gorai.002G259700 Gossypium raimondii HOM05D003987 ORTHO05D004532 2.1e-68 263.8 515 41.0
Gorai.012G110200 Gossypium raimondii HOM05D003987 ORTHO05D004532 6.0e-68 262.3 505 42.0
Gohir.D04G127200 Gossypium hirsutum HOM05D003987 ORTHO05D004532 7.9e-68 261.9 505 41.8
Nn2g13566 Nelumbo nucifera HOM05D003987 ORTHO05D004532 1.3e-67 261.2 518 40.3
Gohir.A01G224300 Gossypium hirsutum HOM05D003987 ORTHO05D004532 3.9e-67 259.6 515 40.4
Oeu009906.1 Olea europaea HOM05D003987 ORTHO05D004532 6.6e-67 258.8 517 42.0
Ciclev10011513m.g Citrus clementina HOM05D003987 ORTHO05D004532 1.1e-66 258.1 487 43.5
Gohir.A04G086900 Gossypium hirsutum HOM05D003987 ORTHO05D004532 1.1e-66 258.1 504 41.7
Migut.J00243 Erythranthe guttata HOM05D003987 ORTHO05D004532 5.6e-66 255.8 510 39.0
Thecc.05G024900 Theobroma cacao HOM05D003987 ORTHO05D004532 7.3e-66 255.4 502 41.8
Cfa017278 Carpinus fangiana HOM05D003987 ORTHO05D004532 2.1e-65 253.8 496 41.5
Haze_20924 Corylus avellana HOM05D003987 ORTHO05D004532 3.6e-65 253.1 499 40.5
Duzib128G2001 Durio zibethinus HOM05D003987 ORTHO05D004532 3.1e-64 250.0 498 42.0
Potri.006G094600 Populus trichocarpa HOM05D003987 ORTHO05D004532 3.1e-64 250.0 506 41.7
TAR633G1447 Trochodendron aralioides HOM05D003987 ORTHO05D004532 9.9e-63 245.0 522 39.5
MELO3C009204.2 Cucumis melo HOM05D003987 ORTHO05D004532 1.3e-62 244.6 484 40.7
Cc06_g01840 Coffea canephora HOM05D003987 ORTHO05D004532 1.4e-61 241.1 527 38.3
CsaV3_3G034330 Cucumis sativus L. HOM05D003987 ORTHO05D004532 2.4e-61 240.4 496 39.7
Potri.016G109100 Populus trichocarpa HOM05D003987 ORTHO05D004532 2.4e-61 240.4 503 41.9
CSS0016809 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 7.1e-61 238.8 448 42.0
Prupe.6G268000 Prunus persica HOM05D003987 ORTHO05D004532 1.2e-60 238.0 498 41.2
Sabra06G0072400 Salix brachista HOM05D003987 ORTHO05D004532 1.2e-60 238.0 509 39.7
HanXRQChr01g0001271 Helianthus annuus HOM05D003987 ORTHO05D004532 3.0e-59 233.4 464 43.1
QL07p027561 Quercus lobata HOM05D003987 ORTHO05D004532 3.0e-59 233.4 504 39.3
vmacro08611 Vaccinium macrocarpon HOM05D003987 ORTHO05D004532 3.0e-59 233.4 524 38.9
TWI77G0200 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 1.9e-58 230.7 495 39.0
CAN.G351.10 Capsicum annuum HOM05D003987 ORTHO05D004532 2.5e-58 230.3 254 56.3
Glyma.07G142800 Glycine max HOM05D003987 ORTHO05D004532 2.5e-58 230.3 487 38.4
Lj3g0003026 Lotus japonicus HOM05D003987 ORTHO05D004532 3.3e-58 229.9 494 38.9
MD04G1143500 Malus domestica HOM05D003987 ORTHO05D004532 4.3e-58 229.6 492 41.9
Phvul.008G111900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 4.3e-58 229.6 483 41.0
Lsat_1_v5_gn_9_33201 Lactuca sativa HOM05D003987 ORTHO05D004532 7.4e-58 228.8 518 35.9
MD12G1157700 Malus domestica HOM05D003987 ORTHO05D004532 1.3e-57 228.0 481 42.6
arahy.Tifrunner.gnm1.ann1.B3S732 Arachis hypogaea HOM05D003987 ORTHO05D004532 2.1e-57 227.3 510 40.0
ClCG10G021770 Citrullus lanatus HOM05D003987 ORTHO05D004532 2.1e-57 227.3 501 38.3
DCAR_028789 Daucus carota HOM05D003987 ORTHO05D004532 8.1e-57 225.3 524 36.3
arahy.Tifrunner.gnm1.ann1.S0ZXK0 Arachis hypogaea HOM05D003987 ORTHO05D004532 1.8e-56 224.2 510 39.6
COL.COLO4_14650 Corchorus olitorius HOM05D003987 ORTHO05D004532 4.0e-56 223.0 497 39.6
Hund08928 Selenicereus undatus HOM05D003987 ORTHO05D004532 5.3e-56 222.6 497 39.4
Glyma.18G193700 Glycine max HOM05D003987 ORTHO05D004532 1.2e-55 221.5 489 38.0
VMungo1383G2510 Vigna mungo HOM05D003987 ORTHO05D004532 1.2e-55 221.5 481 40.5
DCAR_012161 Daucus carota HOM05D003987 ORTHO05D004532 2.0e-55 220.7 507 35.3
Cpa.g.sc56.87 Carica papaya HOM05D003987 ORTHO05D004532 5.8e-55 219.2 498 36.3
Migut.L01985 Erythranthe guttata HOM05D003987 ORTHO05D004532 5.8e-55 219.2 443 38.1
Carub.0004s1992 Capsella rubella HOM05D003987 ORTHO05D004532 1.9e-53 214.2 475 38.7
Lj1g0003107 Lotus japonicus HOM05D003987 ORTHO05D004532 3.2e-53 213.4 495 38.4
RcHm_v2.0_Chr3g0464181 Rosa chinensis HOM05D003987 ORTHO05D004532 3.2e-53 213.4 509 39.1
Sp4g20270 Schrenkiella parvula HOM05D003987 ORTHO05D004532 4.2e-53 213.0 480 38.5
FvH4_6g12360 Fragaria vesca HOM05D003987 ORTHO05D004532 5.5e-53 212.6 507 37.5
TAR623G1001 Trochodendron aralioides HOM05D003987 ORTHO05D004532 2.1e-52 210.7 398 44.0
AT2G37960 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 2.7e-52 210.3 470 38.7
FAN02G3471 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.8e-51 207.6 510 35.3
Solyc10g086740.3 Solanum lycopersicum HOM05D003987 ORTHO05D004532 3.9e-51 206.5 349 42.4
AL5G35070 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 6.7e-51 205.7 504 38.3
AUR62025345 Chenopodium quinoa HOM05D003987 ORTHO05D004532 1.5e-50 204.5 495 36.8
AL4G34930 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 3.3e-50 203.4 473 38.3
Lalb_Chr01g0022851 Lupinus albus HOM05D003987 ORTHO05D004532 4.3e-50 203.0 487 39.4
PGR031G1271 Punica granatum HOM05D003987 ORTHO05D004532 5.7e-50 202.6 490 35.5
FAN09G0914 Fragaria x ananassa HOM05D003987 ORTHO05D004532 7.4e-50 202.2 508 35.8
Thhalv10016588m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 1.6e-49 201.1 478 37.9
AUR62028348 Chenopodium quinoa HOM05D003987 ORTHO05D004532 2.8e-49 200.3 488 36.9
CANSAT78G1629 Cannabis sativa HOM05D003987 ORTHO05D004532 4.1e-48 196.4 478 34.1
Psat7g242560 Pisum sativum HOM05D003987 ORTHO05D004532 1.2e-47 194.9 496 36.9
A04p29100 Brassica napus HOM05D003987 ORTHO05D004532 3.4e-47 193.4 479 37.8
Manes.09G100200 Manihot esculenta HOM05D003987 ORTHO05D004532 4.5e-47 193.0 451 38.8
BraA04t18380Z Brassica rapa HOM05D003987 ORTHO05D004532 5.8e-47 192.6 484 37.8
MBI14_g28607_MAGBIO Magnolia biondii HOM05D003987 ORTHO05D004532 1.0e-46 191.8 508 32.1
Medtr4g019040 Medicago truncatula HOM05D003987 ORTHO05D004532 6.5e-46 189.1 491 36.0
BolC4t28137H Brassica oleracea HOM05D003987 ORTHO05D004532 8.4e-46 188.7 476 36.8
CARHR132510 Cardamine hirsuta HOM05D003987 ORTHO05D004532 8.4e-46 188.7 487 36.8
Oeu044376.1 Olea europaea HOM05D003987 ORTHO05D004532 5.5e-45 186.0 423 35.9
EL10Ac8g18936 Beta vulgaris HOM05D003987 ORTHO05D004532 9.3e-45 185.3 505 34.7
ECA248G1591 Erigeron canadensis HOM05D003987 ORTHO05D004532 1.2e-44 184.9 410 39.3
Sc22g0004580 Simmondsia chinensis HOM05D003987 ORTHO05D004532 4.6e-44 183.0 465 38.5
SGA_v2.0_scaffold75G24988 Striga asiatica HOM05D003987 ORTHO05D004532 4.6e-44 183.0 509 34.2
PSO339G5295 Papaver somniferum HOM05D003987 ORTHO05D004532 6.7e-43 179.1 516 35.9
AT3G54060 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 5.7e-42 176.0 473 36.8
Aqoxy1G00765 Aquilegia oxysepala HOM05D003987 ORTHO05D004532 3.7e-41 173.3 501 32.9
PSO384G1037 Papaver somniferum HOM05D003987 ORTHO05D004532 3.7e-41 173.3 517 35.4
BraA05t19770Z Brassica rapa HOM05D003987 ORTHO05D004532 4.8e-41 172.9 383 37.9
BcaC02g11934 Brassica carinata HOM05D003987 ORTHO05D004532 6.3e-41 172.6 374 37.2
C04p09710 Brassica napus HOM05D003987 ORTHO05D004532 8.2e-41 172.2 379 37.7
A05p08030 Brassica napus HOM05D003987 ORTHO05D004532 1.1e-40 171.8 379 38.0
unitig_749.g14175 Utricularia gibba HOM05D003987 ORTHO05D004532 1.1e-40 171.8 512 32.2
Aa31LG10G8760 Aethionema arabicum HOM05D003987 ORTHO05D004532 1.4e-40 171.4 433 34.4
Thhalv10010371m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 1.4e-40 171.4 456 34.4
Lalb_Chr19g0124881 Lupinus albus HOM05D003987 ORTHO05D004532 1.4e-40 171.4 433 37.0
Ca_20115_v3 Cicer arietinum L. HOM05D003987 ORTHO05D004532 3.1e-40 170.2 459 38.1
arahy.Tifrunner.gnm1.ann1.L5BN96 Arachis hypogaea HOM05D003987 ORTHO05D004532 9.0e-40 168.7 487 38.2
Duzib093G1974 Durio zibethinus HOM05D003987 ORTHO05D004532 9.0e-40 168.7 222 49.5
Sed0025444 Sechium edule HOM05D003987 ORTHO05D004532 9.0e-40 168.7 436 38.8
arahy.Tifrunner.gnm1.ann1.84Z36X Arachis hypogaea HOM05D003987 ORTHO05D004532 2.6e-39 167.2 485 37.9
BolC4t22577H Brassica oleracea HOM05D003987 ORTHO05D004532 1.4e-37 161.4 398 38.9
BcaB02g09232 Brassica carinata HOM05D003987 ORTHO05D004532 3.2e-37 160.2 412 33.0
Gohir.D01G213600 Gossypium hirsutum HOM05D003987 ORTHO05D004532 1.2e-36 158.3 224 47.3
Dinv04008 Davidia involucrata HOM05D003987 ORTHO05D004532 1.6e-36 157.9 146 65.1
CDE02G0690 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 1.0e-35 155.2 430 32.1
C06p21870 Brassica napus HOM05D003987 ORTHO05D004532 1.4e-35 154.8 425 36.7
Sp5g08320 Schrenkiella parvula HOM05D003987 ORTHO05D004532 1.4e-35 154.8 381 34.9
MSTRG.19040 Avicennia marina HOM05D003987 ORTHO05D004532 3.0e-35 153.7 149 58.4
THA.LOC104805691 Tarenaya hassleriana HOM05D003987 ORTHO05D004532 6.7e-35 152.5 225 43.6
BcaC08g44664 Brassica carinata HOM05D003987 ORTHO05D004532 8.8e-35 152.1 430 36.0
Solyc10g086750.1 Solanum lycopersicum HOM05D003987 ORTHO05D004532 2.2e-33 147.5 145 58.6
A07p21960 Brassica napus HOM05D003987 ORTHO05D004532 3.7e-33 146.7 423 33.1
CDE09G1167 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 6.3e-33 146.0 459 30.1
arahy.Tifrunner.gnm1.ann1.C5KK4K Arachis hypogaea HOM05D003987 ORTHO05D004532 1.8e-32 144.4 429 37.3
BraA07t29878Z Brassica rapa HOM05D003987 ORTHO05D004532 5.3e-32 142.9 427 32.3
Sed0006107 Sechium edule HOM05D003987 ORTHO05D004532 9.1e-32 142.1 402 33.8
MSTRG.19041 Avicennia marina HOM05D003987 ORTHO05D004532 1.9e-29 134.4 221 46.6
FAN05G0535 Fragaria x ananassa HOM05D003987 ORTHO05D004532 3.2e-29 133.7 221 40.7
BcaB02g07750 Brassica carinata HOM05D003987 ORTHO05D004532 7.2e-29 132.5 403 33.0
TPR.G8224 Trifolium pratense HOM05D003987 ORTHO05D004532 7.2e-29 132.5 141 64.5
unitig_26.g9099 Utricularia gibba HOM05D003987 ORTHO05D004532 5.1e-27 126.3 116 56.9
Actinidia01122 Actinidia chinensis HOM05D003987 ORTHO05D004532 6.7e-27 125.9 164 50.0
Sp5g18210 Schrenkiella parvula HOM05D003987 ORTHO05D004532 6.7e-27 125.9 481 28.5
Sabra16G0105800 Salix brachista HOM05D003987 ORTHO05D004532 1.5e-26 124.8 135 56.3
FAN14G4402 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.8e-24 117.9 162 43.8
TWI74G0508 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 7.0e-24 115.9 432 30.3
Carub.0005s2065 Capsella rubella HOM05D003987 ORTHO05D004532 2.0e-23 114.4 167 44.9
Eucgr.A00531 Eucalyptus grandis HOM05D003987 ORTHO05D004532 2.0e-23 114.4 206 42.2
TPR.G8182 Trifolium pratense HOM05D003987 ORTHO05D004532 2.5e-21 107.5 177 40.1
ATR0618G159 Amborella trichopoda HOM05D003987 ORTHO05D004532 2.6e-18 97.4 224 35.7
SEGI_16848 Sequoiadendron giganteum HOM05D003987 ORTHO05D004532 1.1e-16 92.0 518 27.0
Glyma.01G108800 Glycine max HOM05D003987 ORTHO05D004532 4.1e-16 90.1 226 34.5
Glyma.01G153900 Glycine max HOM05D003987 ORTHO05D004532 1.2e-15 88.6 283 31.1
HPP92_003415 Vanilla planifolia HOM05D003987 ORTHO05D004532 1.2e-15 88.6 452 26.5
Psat6g189000 Pisum sativum HOM05D003987 ORTHO05D004532 2.7e-15 87.4 244 29.5
Medtr7g066170 Medicago truncatula HOM05D003987 ORTHO05D004532 3.5e-15 87.0 123 45.5
SHI32881 Sapria himalayana HOM05D003987 ORTHO05D004532 2.5e-13 80.9 54 68.5
CDE04G2728 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 5.5e-13 79.7 354 27.4
Glyma.01G108900 Glycine max HOM05D003987 ORTHO05D004532 7.2e-13 79.3 403 26.3
Glyma.U031101 Glycine max HOM05D003987 ORTHO05D004532 1.2e-12 78.6 403 26.3
TPR.G34870 Trifolium pratense HOM05D003987 ORTHO05D004532 2.1e-12 77.8 127 43.3
VMungo1309G3141 Vigna mungo HOM05D014262 ORTHO05D018084 4.7e-12 76.6 132 36.4
BolC6t37375H Brassica oleracea HOM05D003987 ORTHO05D004532 1.4e-11 75.1 72 50.0
Phvul.006G111000 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 1.4e-11 75.1 103 36.9
TPR.G13647 Trifolium pratense HOM05D003987 ORTHO05D004532 3.0e-11 73.9 133 33.8
Glyma.03G074167 Glycine max HOM05D003987 ORTHO05D004532 6.8e-11 72.8 368 26.1
Rhsim07G0146000 Rhododendron simsii HOM05D003987 ORTHO05D004532 3.4e-10 70.5 198 34.3
BcaC02g11935 Brassica carinata HOM05D003987 ORTHO05D004532 1.3e-09 68.6 44 70.5
unitig_26.g9098 Utricularia gibba HOM05D003987 ORTHO05D004532 2.2e-09 67.8 124 37.9
Phvul.010G006900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 6.3e-09 66.2 132 31.8
VMungo0331G1594 Vigna mungo HOM05D003987 ORTHO05D004532 1.4e-08 65.1 102 47.1
Os03g0100010 Oryza sativa ssp. japonica HOM05D003987 ORTHO05D004532 2.4e-08 64.3 65 46.2
Phvul.010G006800 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 4.1e-08 63.5 133 32.3
Phvul.005G150800 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 9.1e-08 62.4 281 24.6
Phvul.008G082101 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 3.5e-07 60.5 123 30.9
Phvul.010G006100 Phaseolus vulgaris HOM05D014262 ORTHO05D004532 4.5e-07 60.1 293 24.6
VMungo1309G2694 Vigna mungo HOM05D014262 ORTHO05D018084 7.7e-07 59.3 119 31.9
Phvul.008G081900 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 1.0e-06 58.9 123 30.9


User provided reference genes

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