Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002152g0020 Nicotiana tabacum HOM05D005668 ORTHO05D007082 5.5e-150 534.3 266 100.0
CAN.G978.9 Capsicum annuum HOM05D005668 ORTHO05D007082 5.5e-41 172.2 189 52.9
PGSC0003DMG400020340 Solanum tuberosum HOM05D005668 ORTHO05D007082 5.1e-39 165.6 174 55.2
Solyc09g011730.4 Solanum lycopersicum HOM05D005668 ORTHO05D007082 9.7e-38 161.4 174 54.6
Sopen09g006550 Solanum pennellii HOM05D005668 ORTHO05D007082 9.7e-38 161.4 174 54.6
PGSC0003DMG400019135 Solanum tuberosum HOM05D005668 ORTHO05D007082 1.4e-36 157.5 160 55.0
CAN.G351.19 Capsicum annuum HOM05D005668 ORTHO05D007082 7.2e-33 145.2 159 52.2
Peaxi162Scf00014g01419 Petunia axillaris HOM05D005668 ORTHO05D007082 9.3e-33 144.8 155 53.5
Nitab4.5_0000119g0350 Nicotiana tabacum HOM05D005668 ORTHO05D007082 1.4e-31 141.0 187 45.5
Migut.J00254 Erythranthe guttata HOM05D005668 ORTHO05D007082 1.8e-31 140.6 158 50.6
Lj3P959T33 Lonicera japonica HOM05D005668 ORTHO05D007082 1.3e-29 134.4 104 64.4
SGA_v2.0_scaffold75G24983 Striga asiatica HOM05D005668 ORTHO05D007082 4.8e-29 132.5 103 63.1
Actinidia29156 Actinidia chinensis HOM05D005668 ORTHO05D007082 1.1e-28 131.3 100 64.0
MSTRG.5615 Avicennia marina HOM05D005668 ORTHO05D007082 1.1e-28 131.3 102 63.7
DCAR_024047 Daucus carota HOM05D005668 ORTHO05D007082 1.4e-28 131.0 103 64.1
GSVIVG01034046001 Vitis vinifera HOM05D005668 ORTHO05D007082 1.4e-28 131.0 101 64.4
Actinidia13809 Actinidia chinensis HOM05D005668 ORTHO05D007082 1.8e-28 130.6 100 64.0
Cc06_g01940 Coffea canephora HOM05D005668 ORTHO05D007082 3.1e-28 129.8 100 64.0
Nn2g13550 Nelumbo nucifera HOM05D005668 ORTHO05D007082 3.1e-28 129.8 105 62.9
CSS0033766 Camellia sinensis var. sinensis HOM05D005668 ORTHO05D007082 4.1e-28 129.4 112 58.0
Rhsim05G0201000 Rhododendron simsii HOM05D005668 ORTHO05D007082 1.2e-27 127.9 101 63.4
HanXRQChr10g0292601 Helianthus annuus HOM05D005668 ORTHO05D007082 1.5e-27 127.5 97 63.9
Lsat_1_v5_gn_9_29260 Lactuca sativa HOM05D005668 ORTHO05D007082 1.5e-27 127.5 101 61.4
TAR633G1417 Trochodendron aralioides HOM05D005668 ORTHO05D007082 1.5e-27 127.5 98 65.3
Hma1.2p1_0671F.1_g200690 Hydrangea macrophylla HOM05D005668 ORTHO05D007082 2.6e-27 126.7 97 62.9
unitig_27.g24805 Utricularia gibba HOM05D005668 ORTHO05D007082 2.6e-27 126.7 103 61.2
Nitab4.5_0000008g0300 Nicotiana tabacum HOM05D005668 ORTHO05D007082 4.5e-27 125.9 84 78.6
ECA247G1252 Erigeron canadensis HOM05D005668 ORTHO05D007082 1.0e-26 124.8 100 62.0
HanXRQChr06g0176661 Helianthus annuus HOM05D005668 ORTHO05D007082 1.0e-26 124.8 101 62.4
Manes.09G099500 Manihot esculenta HOM05D005668 ORTHO05D007082 2.9e-26 123.2 128 50.8
PSO384G2457 Papaver somniferum HOM05D005668 ORTHO05D007082 6.5e-26 122.1 101 60.4
Hund26016 Selenicereus undatus HOM05D005668 ORTHO05D007082 1.1e-25 121.3 104 54.8
PSO339G5656 Papaver somniferum HOM05D005668 ORTHO05D007082 1.4e-25 120.9 101 59.4
Aqoxy5G03828 Aquilegia oxysepala HOM05D005668 ORTHO05D007082 1.9e-25 120.6 101 61.4
TWI77G0370 Tripterygium wilfordii HOM05D005668 ORTHO05D007082 5.5e-25 119.0 100 58.0
Potri.006G093700 Populus trichocarpa HOM05D005668 ORTHO05D007082 7.2e-25 118.6 104 56.7
Thecc.05G026500 Theobroma cacao HOM05D005668 ORTHO05D007082 1.2e-24 117.9 101 57.4
Sabra06G0071200 Salix brachista HOM05D005668 ORTHO05D007082 1.6e-24 117.5 105 56.2
QL07p027771 Quercus lobata HOM05D005668 ORTHO05D007082 2.7e-24 116.7 103 56.3
EL10Ac7g17156 Beta vulgaris HOM05D005668 ORTHO05D007082 3.6e-24 116.3 103 54.4
Potri.016G105600 Populus trichocarpa HOM05D005668 ORTHO05D007082 6.1e-24 115.5 104 54.8
Sc01g0004980 Simmondsia chinensis HOM05D005668 ORTHO05D007082 6.1e-24 115.5 135 44.4
CANSAT35G1374 Cannabis sativa HOM05D005668 ORTHO05D007082 7.9e-24 115.2 102 56.9
Cpa.g.sc56.75 Carica papaya HOM05D005668 ORTHO05D007082 1.0e-23 114.8 102 54.9
COL.COLO4_14664 Corchorus olitorius HOM05D005668 ORTHO05D007082 1.4e-23 114.4 101 56.4
Eucgr.F01481 Eucalyptus grandis HOM05D005668 ORTHO05D007082 1.4e-23 114.4 122 51.6
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 1.8e-23 114.0 103 54.4
Gohir.A09G162000 Gossypium hirsutum HOM05D005668 ORTHO05D007082 2.3e-23 113.6 105 52.4
Gohir.D09G157600 Gossypium hirsutum HOM05D005668 ORTHO05D007082 2.3e-23 113.6 105 52.4
Gorai.006G179300 Gossypium raimondii HOM05D005668 ORTHO05D007082 2.3e-23 113.6 105 52.4
Atru.chr8.2154 Acer truncatum HOM05D005668 ORTHO05D007082 3.0e-23 113.2 97 58.8
CiPaw.10G150900 Carya illinoinensis HOM05D005668 ORTHO05D007082 3.0e-23 113.2 103 54.4
AUR62034588 Chenopodium quinoa HOM05D005668 ORTHO05D007082 5.1e-23 112.5 103 51.5
Duzib093G0236 Durio zibethinus HOM05D005668 ORTHO05D007082 6.7e-23 112.1 101 54.5
Ciclev10012485m.g Citrus clementina HOM05D005668 ORTHO05D007082 8.8e-23 111.7 127 47.2
AUR62036679 Chenopodium quinoa HOM05D005668 ORTHO05D007082 1.1e-22 111.3 103 51.5
AL3G20360 Arabidopsis lyrata HOM05D005668 ORTHO05D007082 1.5e-22 110.9 99 55.6
Thhalv10021409m.g Eutrema salsugineum HOM05D005668 ORTHO05D007082 1.5e-22 110.9 99 56.6
Haze_20910 Corylus avellana HOM05D005668 ORTHO05D007082 2.6e-22 110.2 103 52.4
Manes.07G057000 Manihot esculenta HOM05D005668 ORTHO05D007082 7.4e-22 108.6 105 52.4
CARHR083600 Cardamine hirsuta HOM05D005668 ORTHO05D007082 1.7e-21 107.5 99 54.5
AT3G09250 Arabidopsis thaliana HOM05D005668 ORTHO05D007082 2.2e-21 107.1 96 54.2
Carub.0003s0836 Capsella rubella HOM05D005668 ORTHO05D007082 2.2e-21 107.1 99 53.5
MBI14_g25115_MAGBIO Magnolia biondii HOM05D005668 ORTHO05D007082 3.7e-21 106.3 98 56.1
MBI14_g45810_MAGBIO Magnolia biondii HOM05D005668 ORTHO05D007082 3.7e-21 106.3 98 56.1
THA.LOC104823270 Tarenaya hassleriana HOM05D005668 ORTHO05D007082 3.7e-21 106.3 160 42.5
Sp3g07630 Schrenkiella parvula HOM05D005668 ORTHO05D007082 4.8e-21 105.9 99 53.5
CDE04G3656 Ceratophyllum demersum HOM05D005668 ORTHO05D007082 6.3e-21 105.5 101 53.5
BolC1t05468H Brassica oleracea HOM05D005668 ORTHO05D007082 8.2e-21 105.1 156 41.0
Os02g0788500 Oryza sativa ssp. japonica HOM05D005668 ORTHO05D007082 1.1e-20 104.8 98 55.1
BraA01t04309Z Brassica rapa HOM05D005668 ORTHO05D007082 1.4e-20 104.4 156 41.7
Gohir.D10G244900 Gossypium hirsutum HOM05D005668 ORTHO05D007082 2.4e-20 103.6 99 51.5
Gorai.011G282300 Gossypium raimondii HOM05D005668 ORTHO05D007082 2.4e-20 103.6 99 51.5
PGR044G0692 Punica granatum HOM05D005668 ORTHO05D007082 2.4e-20 103.6 100 53.0
BcaC09g48013 Brassica carinata HOM05D005668 ORTHO05D007082 3.1e-20 103.2 96 54.2
Gohir.A10G232501 Gossypium hirsutum HOM05D005668 ORTHO05D007082 3.1e-20 103.2 99 51.5
Sed0009323 Sechium edule HOM05D005668 ORTHO05D007082 4.1e-20 102.8 136 41.2
BcaC09g48059 Brassica carinata HOM05D005668 ORTHO05D007082 6.9e-20 102.1 114 47.4
CiPaw.09G203400 Carya illinoinensis HOM05D005668 ORTHO05D007082 6.9e-20 102.1 99 49.5
ClCG10G021640 Citrullus lanatus HOM05D005668 ORTHO05D007082 6.9e-20 102.1 100 48.0
CsaV3_3G034370 Cucumis sativus L. HOM05D005668 ORTHO05D007082 6.9e-20 102.1 101 48.5
Prupe.6G267200 Prunus persica HOM05D005668 ORTHO05D007082 6.9e-20 102.1 103 50.5
MELO3C009208.2 Cucumis melo HOM05D005668 ORTHO05D007082 1.2e-19 101.3 101 48.5
FAN05G5175 Fragaria x ananassa HOM05D005668 ORTHO05D007082 1.5e-19 100.9 123 43.9
FAN09G2081 Fragaria x ananassa HOM05D005668 ORTHO05D007082 1.5e-19 100.9 105 47.6
FvH4_6g12490 Fragaria vesca HOM05D005668 ORTHO05D007082 2.0e-19 100.5 123 43.9
FAN02G1041 Fragaria x ananassa HOM05D005668 ORTHO05D007082 2.0e-19 100.5 105 47.6
FAN14G5852 Fragaria x ananassa HOM05D005668 ORTHO05D007082 2.0e-19 100.5 123 43.9
RcHm_v2.0_Chr3g0464311 Rosa chinensis HOM05D005668 ORTHO05D007082 2.0e-19 100.5 105 47.6
MD12G1156400 Malus domestica HOM05D005668 ORTHO05D007082 1.0e-18 98.2 126 44.4
Aa31LG3G1740 Aethionema arabicum HOM05D005668 ORTHO05D007082 1.3e-18 97.8 144 37.5
arahy.Tifrunner.gnm1.ann1.WQ4JXZ Arachis hypogaea HOM05D005668 ORTHO05D007082 1.3e-18 97.8 99 49.5
arahy.Tifrunner.gnm1.ann1.J12K19 Arachis hypogaea HOM05D005668 ORTHO05D007082 1.7e-18 97.4 98 49.0
Phvul.006G070400 Phaseolus vulgaris HOM05D005668 ORTHO05D007082 2.9e-18 96.7 110 44.5
Ca_07382_v3 Cicer arietinum L. HOM05D005668 ORTHO05D007082 3.8e-18 96.3 97 49.5
SHI12750 Sapria himalayana HOM05D005668 ORTHO05D007082 3.8e-18 96.3 100 47.0
SEGI_35617 Sequoiadendron giganteum HOM05D005668 ORTHO05D007082 3.8e-18 96.3 131 43.5
Glyma.03G073762 Glycine max HOM05D005668 ORTHO05D007082 6.5e-18 95.5 132 40.2
MD04G1141800 Malus domestica HOM05D005668 ORTHO05D007082 6.5e-18 95.5 105 46.7
Os01g0753200 Oryza sativa ssp. japonica HOM05D005668 ORTHO05D007082 6.5e-18 95.5 100 49.0
Gohir.A10G229920 Gossypium hirsutum HOM05D005668 ORTHO05D007082 1.1e-17 94.7 99 48.5
VMungo0540G0241 Vigna mungo HOM05D005668 ORTHO05D007082 1.4e-17 94.4 139 38.8
Zm00001eb257420 Zea mays HOM05D005668 ORTHO05D007082 1.4e-17 94.4 97 50.5
Glyma.01G107100 Glycine max HOM05D005668 ORTHO05D007082 1.9e-17 94.0 131 38.9
Psat7g240360 Pisum sativum HOM05D005668 ORTHO05D007082 1.9e-17 94.0 141 38.3
Medtr4g019910 Medicago truncatula HOM05D005668 ORTHO05D007082 5.5e-17 92.4 96 46.9
HPP92_006850 Vanilla planifolia HOM05D005668 ORTHO05D007082 7.2e-17 92.0 97 52.6
HPP92_006867 Vanilla planifolia HOM05D005668 ORTHO05D007082 7.2e-17 92.0 97 52.6
Lalb_Chr07g0193171 Lupinus albus HOM05D005668 ORTHO05D007082 9.4e-17 91.7 99 45.5
Lj3g0016116 Lotus japonicus HOM05D005668 ORTHO05D007082 1.2e-16 91.3 123 37.4
ATR0950G003 Amborella trichopoda HOM05D005668 ORTHO05D007082 1.5e-14 84.3 98 50.0
BcaC01g04218 Brassica carinata HOM05D005668 ORTHO05D007082 4.4e-14 82.8 96 47.9
Phvul.006G070500 Phaseolus vulgaris HOM05D005668 ORTHO05D007082 2.8e-13 80.1 110 36.4
Dinv37103 Davidia involucrata HOM05D005668 ORTHO05D007082 8.2e-13 78.6 75 54.7
vmacro20204 Vaccinium macrocarpon HOM05D005668 ORTHO05D007082 1.4e-12 77.8 41 70.7
Oeu039148.1 Olea europaea HOM05D005668 ORTHO05D007082 4.1e-12 76.3 41 70.7
Psat3g035960 Pisum sativum HOM05D005668 ORTHO05D007082 9.1e-12 75.1 118 38.1
SMO143G0113 Selaginella moellendorffii HOM05D005668 ORTHO05D007082 1.5e-09 67.8 93 38.7
AagrBONN_evm.TU.Sc2ySwM_228.2951 Anthoceros agrestis HOM05D005668 ORTHO05D007082 1.9e-09 67.4 83 44.6
Dinv35535 Davidia involucrata HOM05D005668 ORTHO05D007082 3.6e-08 63.2 71 53.5
BcaB04g18542 Brassica carinata HOM05D005668 ORTHO05D007082 1.0e-07 61.6 41 61.0
C03p43750 Brassica napus HOM05D005668 ORTHO05D007082 3.0e-07 60.1 38 63.2
TPR.G339 Trifolium pratense HOM05D005668 ORTHO05D007082 7.5e-06 55.5 89 36.0


User provided reference genes

Program Settings