Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 8.4e-85 317.0 163 100.0
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.6e-72 276.2 167 88.0
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 5.0e-45 184.9 179 66.5
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 3.0e-42 175.6 176 64.2
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 1.5e-41 173.3 176 63.6
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 1.6e-38 163.3 184 60.3
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 4.9e-24 115.2 193 46.1
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 1.4e-23 113.6 198 45.5
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 1.8e-23 113.2 181 48.1
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 3.2e-23 112.5 172 51.7
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 5.4e-23 111.7 182 51.1
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 5.4e-23 111.7 183 48.1
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.6e-22 110.2 177 49.2
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 7.8e-22 107.8 178 44.9
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 1.3e-21 107.1 183 49.7
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.9e-21 105.5 190 45.3
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 3.9e-21 105.5 180 43.3
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 3.9e-21 105.5 202 41.6
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 8.6e-21 104.4 182 44.5
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 8.6e-21 104.4 182 44.5
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 1.5e-20 103.6 191 43.5
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.9e-20 103.2 188 42.6
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.9e-20 103.2 188 42.6
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 1.9e-20 103.2 156 47.4
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.3e-20 102.4 180 42.8
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 4.3e-20 102.1 184 41.8
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 7.3e-20 101.3 183 41.0
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 7.3e-20 101.3 183 41.0
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 7.3e-20 101.3 177 40.7
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 9.5e-20 100.9 184 42.9
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 1.2e-19 100.5 178 44.9
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.6e-19 100.1 167 43.1
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 2.1e-19 99.8 184 42.4
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 2.1e-19 99.8 181 41.4
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 2.1e-19 99.8 181 41.4
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 2.1e-19 99.8 189 41.3
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 4.7e-19 98.6 191 43.5
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 6.1e-19 98.2 182 40.7
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 1.0e-18 97.4 163 44.8
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 1.0e-18 97.4 168 45.8
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.0e-18 97.4 194 43.3
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.0e-18 97.4 167 42.5
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 1.4e-18 97.1 182 42.9
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 1.8e-18 96.7 179 45.3
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 2.3e-18 96.3 183 40.4
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 3.1e-18 95.9 179 41.3
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 4.0e-18 95.5 181 40.9
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 4.0e-18 95.5 202 43.1
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 5.2e-18 95.1 195 42.6
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 5.2e-18 95.1 182 39.6
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 5.2e-18 95.1 188 39.9
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 6.8e-18 94.7 183 41.0
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 6.8e-18 94.7 183 41.0
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 8.9e-18 94.4 183 40.4
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 8.9e-18 94.4 183 40.4
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 8.9e-18 94.4 183 41.0
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 1.5e-17 93.6 186 44.1
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 2.0e-17 93.2 180 43.3
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 2.6e-17 92.8 182 41.2
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 2.6e-17 92.8 173 41.0
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 2.6e-17 92.8 185 44.3
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 2.6e-17 92.8 163 47.2
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 3.4e-17 92.4 160 45.6
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 4.4e-17 92.0 188 44.7
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 4.4e-17 92.0 181 39.2
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 4.4e-17 92.0 181 39.2
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 4.4e-17 92.0 187 43.3
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 4.4e-17 92.0 167 44.9
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 9.8e-17 90.9 198 42.9
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 1.3e-16 90.5 181 39.2
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.7e-16 90.1 145 40.7
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 2.2e-16 89.7 182 41.2
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 2.9e-16 89.4 192 39.1
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 3.7e-16 89.0 156 44.9
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 4.9e-16 88.6 123 50.4
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 4.9e-16 88.6 185 38.9
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 4.9e-16 88.6 158 44.9
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 6.4e-16 88.2 150 43.3
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 8.3e-16 87.8 130 45.4
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 1.1e-15 87.4 164 43.3
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 1.4e-15 87.0 175 41.7
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 1.4e-15 87.0 196 40.3
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 1.9e-15 86.7 189 39.7
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 1.9e-15 86.7 174 42.5
Sc04g0008280 Simmondsia chinensis HOM05D005097 ORTHO05D006186 2.4e-15 86.3 159 44.7
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 3.2e-15 85.9 181 39.2
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 3.2e-15 85.9 181 39.2
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 3.2e-15 85.9 181 39.2
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 4.1e-15 85.5 177 39.5
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 4.1e-15 85.5 146 43.2
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 7.0e-15 84.7 169 42.0
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 1.2e-14 84.0 178 39.9
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 1.2e-14 84.0 178 39.9
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.2e-14 84.0 147 43.5
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 2.0e-14 83.2 73 61.6
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 2.0e-14 83.2 185 39.5
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 2.0e-14 83.2 178 39.9
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 2.7e-14 82.8 180 41.1
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 2.7e-14 82.8 170 38.8
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 2.7e-14 82.8 154 43.5
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 4.6e-14 82.0 187 40.6
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 6.0e-14 81.6 170 42.4
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 6.0e-14 81.6 168 39.3
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 7.8e-14 81.3 121 44.6
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 1.0e-13 80.9 108 50.9
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 1.3e-13 80.5 190 36.3
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 1.3e-13 80.5 193 40.9
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.3e-13 80.5 176 35.2
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 1.7e-13 80.1 84 52.4
AUR62028807 Chenopodium quinoa HOM05D005097 ORTHO05D006186 1.7e-13 80.1 103 53.4
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 3.0e-13 79.3 165 40.0
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 5.0e-13 78.6 194 37.1
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 6.6e-13 78.2 169 40.8
Ah.02g131220 Amaranthus hybridus HOM05D005097 ORTHO05D006186 6.6e-13 78.2 185 39.5
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 6.6e-13 78.2 176 38.6
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 6.6e-13 78.2 176 38.6
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 6.6e-13 78.2 176 38.6
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 6.6e-13 78.2 176 38.6
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 6.6e-13 78.2 194 37.6
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 6.6e-13 78.2 171 42.1
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 1.1e-12 77.4 96 53.1
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 1.1e-12 77.4 162 38.9
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 1.1e-12 77.4 186 37.6
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 1.1e-12 77.4 181 37.0
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 1.5e-12 77.0 116 46.6
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 2.5e-12 76.3 136 41.9
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 5.6e-12 75.1 71 56.3
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 7.3e-12 74.7 82 54.9
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 1.2e-11 73.9 132 40.9
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 1.6e-11 73.6 143 37.1
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 2.1e-11 73.2 185 37.3
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 2.8e-11 72.8 196 36.7
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.8e-10 70.1 182 37.9
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 1.8e-10 70.1 163 38.0
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 4.0e-10 68.9 72 54.2
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 6.8e-10 68.2 188 35.6
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 5.8e-09 65.1 178 34.3
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 8.3e-08 61.2 163 36.8
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 5.4e-07 58.5 158 36.7
BcaC08g45865 Brassica carinata HOM05D005097 ORTHO05D006186 9.2e-07 57.8 130 37.7
BNapus_Darmor_BZH_scaffold_256p00010 Brassica napus HOM05D005097 ORTHO05D006186 9.2e-07 57.8 161 32.9
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 1.6e-06 57.0 175 33.1
unitig_747.g21176 Utricularia gibba HOM05D005097 ORTHO05D006186 4.6e-06 55.5 150 36.0


User provided reference genes

Program Settings