Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 5.1e-171 604.4 315 100.0
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 5.3e-152 541.2 324 89.5
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 3.6e-140 501.9 348 77.9
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 4.1e-136 488.4 347 75.8
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 5.0e-134 481.5 347 75.2
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 5.0e-134 481.5 347 74.9
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 1.8e-112 409.8 350 62.9
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 4.1e-112 408.7 316 68.0
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 4.1e-112 408.7 327 66.1
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 1.0e-110 404.1 349 62.5
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 1.7e-110 403.3 350 62.3
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 3.8e-110 402.1 351 63.0
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 4.3e-109 398.7 348 62.4
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 4.3e-109 398.7 314 67.2
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 4.3e-109 398.7 348 62.6
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 7.3e-109 397.9 348 62.4
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 1.6e-108 396.7 353 60.9
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.6e-108 396.7 380 58.7
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.6e-108 396.7 348 61.5
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 2.1e-108 396.4 381 58.5
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 2.8e-108 396.0 317 65.0
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.4e-107 393.7 353 60.3
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 1.4e-107 393.7 348 59.8
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.8e-107 393.3 314 65.6
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 2.3e-107 392.9 349 61.6
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 3.0e-107 392.5 347 59.9
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 6.8e-107 391.3 348 61.2
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.2e-106 390.6 347 59.4
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 2.0e-106 389.8 324 64.5
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 2.0e-106 389.8 352 58.5
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 2.6e-106 389.4 352 58.8
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 2.6e-106 389.4 348 59.5
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 3.4e-106 389.0 322 62.7
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.4e-106 389.0 350 60.9
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 1.3e-105 387.1 348 61.2
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 1.3e-105 387.1 350 58.6
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 1.7e-105 386.7 372 57.3
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 2.2e-105 386.3 322 62.1
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 3.7e-105 385.6 350 60.6
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 3.7e-105 385.6 350 60.6
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.1e-104 384.0 352 57.4
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.1e-104 384.0 349 57.6
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.8e-104 383.3 358 60.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 2.4e-104 382.9 347 59.7
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 2.4e-104 382.9 349 57.9
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 2.4e-104 382.9 348 60.1
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 2.4e-104 382.9 314 63.1
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.2e-104 382.5 350 60.3
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 5.4e-104 381.7 314 63.4
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 7.0e-104 381.3 347 58.8
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 7.0e-104 381.3 350 60.0
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 1.6e-103 380.2 357 58.0
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 4.6e-103 378.6 350 58.6
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 7.8e-103 377.9 331 60.4
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 7.8e-103 377.9 322 61.5
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 1.3e-102 377.1 314 62.7
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.7e-102 376.7 316 62.0
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 3.9e-102 375.6 384 54.4
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 3.9e-102 375.6 350 56.6
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 6.6e-102 374.8 316 62.3
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 8.6e-102 374.4 351 56.4
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.3e-101 372.5 350 58.3
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 5.6e-101 371.7 350 59.4
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 4.7e-100 368.6 347 58.5
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 6.2e-100 368.2 351 57.3
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.4e-99 367.1 351 58.1
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.1e-99 365.9 352 56.2
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.2e-98 364.0 347 57.3
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 2.6e-98 362.8 324 59.6
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 4.4e-98 362.1 335 57.6
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 4.4e-98 362.1 324 59.6
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 2.2e-97 359.8 335 57.3
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 2.2e-97 359.8 331 61.6
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 3.7e-97 359.0 350 55.7
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 3.7e-97 359.0 335 57.0
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 2.4e-96 356.3 324 58.6
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 2.4e-96 356.3 324 58.3
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 5.4e-96 355.1 358 56.7
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 2.0e-95 353.2 249 71.1
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 2.7e-95 352.8 348 55.7
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 2.7e-95 352.8 349 53.3
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 3.5e-95 352.4 249 72.7
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 7.8e-95 351.3 324 58.6
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 1.3e-94 350.5 353 55.0
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 1.7e-94 350.1 317 57.4
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.7e-94 350.1 334 56.9
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.7e-94 350.1 353 56.7
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 8.6e-94 347.8 338 55.9
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 1.1e-93 347.4 316 56.0
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 7.3e-93 344.7 314 55.7
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 6.6e-86 321.6 314 55.1
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 8.9e-83 311.2 213 76.5
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 2.6e-82 309.7 351 49.6
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 6.4e-81 305.1 289 59.2
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 5.4e-80 302.0 314 52.2
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 6.0e-79 298.5 317 48.9
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.6e-76 290.4 314 48.7
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 2.1e-76 290.0 265 60.8
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 3.1e-75 286.2 314 48.7
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 4.0e-75 285.8 249 61.4
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 8.7e-70 268.1 316 50.3
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 1.3e-68 264.2 214 64.0
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 6.9e-67 258.5 219 63.0
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 3.3e-61 239.6 213 60.1
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 5.3e-59 232.3 249 50.2
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 2.4e-56 223.4 343 38.5
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 5.3e-51 205.7 179 57.5
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 2.9e-49 199.9 329 42.2
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 7.9e-47 191.8 171 61.4
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 3.1e-43 179.9 252 39.3
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 8.5e-41 171.8 193 51.8
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 1.9e-40 170.6 327 33.3
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 7.2e-32 142.1 160 50.0
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 7.0e-27 125.6 301 32.2
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 5.9e-26 122.5 111 61.3
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.8e-22 110.9 232 40.1
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 2.2e-20 104.0 81 60.5
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 2.8e-20 103.6 82 63.4
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.1e-19 101.7 81 60.5
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 1.6e-18 97.8 143 48.3
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 2.9e-17 93.6 179 35.2
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 4.7e-15 86.3 85 52.9
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 6.3e-12 75.9 52 73.1
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 1.1e-11 75.1 320 24.4
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 1.6e-10 71.2 72 48.6
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 3.8e-09 66.6 72 45.8
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 6.5e-09 65.9 102 47.1


User provided reference genes

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