Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 1.0e-151 540.4 359 100.0
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 2.2e-133 479.6 359 90.8
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 2.9e-85 319.7 238 72.3
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 3.0e-82 309.7 239 70.3
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 1.2e-80 304.3 239 68.6
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 1.4e-79 300.8 239 67.8
Peaxi162Scf00025g00263 Petunia axillaris HOM05D005305 ORTHO05D006394 6.4e-53 212.2 160 70.0
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 2.4e-39 167.2 181 50.8
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 3.1e-39 166.8 166 50.6
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 1.5e-38 164.5 169 52.1
PGSC0003DMG400024738 Solanum tuberosum HOM05D005305 ORTHO05D006394 8.7e-34 148.7 134 60.4
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 3.3e-33 146.7 155 49.7
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 1.0e-26 125.2 206 40.3
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 3.0e-26 123.6 165 45.5
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 6.7e-26 122.5 172 44.2
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 8.8e-26 122.1 208 37.0
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 1.5e-25 121.3 236 36.0
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 9.7e-25 118.6 142 46.5
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 9.7e-25 118.6 152 45.4
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 9.7e-25 118.6 164 44.5
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 1.3e-24 118.2 194 41.8
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 2.8e-24 117.1 152 47.4
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 2.8e-24 117.1 149 48.3
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 6.3e-24 115.9 202 41.1
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.1e-23 115.2 152 45.4
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 2.4e-23 114.0 164 43.3
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.2e-22 111.7 154 45.5
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 3.4e-22 110.2 152 45.4
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 3.4e-22 110.2 162 42.6
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 4.5e-22 109.8 152 44.7
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 4.5e-22 109.8 152 44.7
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 5.9e-22 109.4 158 40.5
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.7e-21 107.8 153 45.1
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 1.7e-21 107.8 188 39.4
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 2.2e-21 107.5 145 43.4
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 2.9e-21 107.1 158 44.3
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 2.9e-21 107.1 148 45.3
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 6.5e-21 105.9 153 41.8
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 6.5e-21 105.9 136 49.3
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 1.9e-20 104.4 145 44.1
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 2.5e-20 104.0 146 41.8
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 3.2e-20 103.6 147 42.2
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 5.5e-20 102.8 147 45.6
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 5.5e-20 102.8 149 45.0
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 9.4e-20 102.1 148 44.6
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 1.2e-19 101.7 144 43.8
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 1.2e-19 101.7 152 42.8
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 1.6e-19 101.3 179 36.3
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 2.1e-19 100.9 171 40.9
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 6.1e-19 99.4 151 42.4
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 6.1e-19 99.4 151 42.4
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 6.1e-19 99.4 148 41.2
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 7.9e-19 99.0 146 41.8
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 2.3e-18 97.4 146 42.5
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 3.0e-18 97.1 147 41.5
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 5.1e-18 96.3 149 41.6
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 1.1e-17 95.1 157 38.9
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 1.1e-17 95.1 184 39.1
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 1.1e-17 95.1 146 39.7
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 2.0e-17 94.4 140 40.7
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 2.0e-17 94.4 140 40.7
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 2.6e-17 94.0 158 38.6
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 2.6e-17 94.0 140 40.7
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 2.6e-17 94.0 146 39.0
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 3.3e-17 93.6 170 38.2
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 4.4e-17 93.2 144 41.0
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 5.7e-17 92.8 140 40.0
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 7.4e-17 92.4 145 37.9
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 9.7e-17 92.0 140 40.0
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 9.7e-17 92.0 164 37.8
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 1.3e-16 91.7 140 40.0
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 6.3e-16 89.4 168 37.5
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 8.2e-16 89.0 157 35.7
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 1.4e-15 88.2 144 40.3
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 2.4e-15 87.4 149 40.9
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 3.1e-15 87.0 148 37.2
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 3.1e-15 87.0 144 36.8
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 3.1e-15 87.0 152 36.2
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 7.0e-15 85.9 148 35.8
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 7.0e-15 85.9 152 36.8
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 2.0e-14 84.3 153 35.9
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.0e-14 84.3 143 39.2
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 2.6e-14 84.0 148 35.8
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 2.6e-14 84.0 143 38.5
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 2.6e-14 84.0 145 37.2
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 3.5e-14 83.6 140 37.1
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 4.5e-14 83.2 143 37.1
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 1.0e-13 82.0 144 36.8
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 1.0e-13 82.0 139 38.8
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 1.0e-13 82.0 145 37.9
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.3e-13 81.6 143 37.8
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.3e-13 81.6 140 37.9
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 1.7e-13 81.3 141 37.6
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 1.7e-13 81.3 144 38.9
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.7e-13 81.3 148 34.5
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 2.9e-13 80.5 88 53.4
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 2.9e-13 80.5 146 33.6
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 6.5e-13 79.3 142 36.6
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 6.5e-13 79.3 142 36.6
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 6.5e-13 79.3 142 36.6
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 6.5e-13 79.3 142 36.6
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.5e-13 79.3 143 35.7
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 2.5e-12 77.4 154 35.7
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 2.5e-12 77.4 150 33.3
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 2.5e-12 77.4 143 36.4
PGSC0003DMG401012933 Solanum tuberosum HOM05D005305 ORTHO05D006394 4.2e-12 76.6 84 54.8
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 7.2e-12 75.9 150 38.0
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.2e-12 75.9 142 35.2
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 1.2e-11 75.1 93 49.5
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.3e-10 70.9 143 34.3
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 4.8e-08 63.2 152 32.2
SGA_v2.0_scaffold65G22173 Striga asiatica HOM05D005305 ORTHO05D006394 1.4e-07 61.6 73 45.2
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 4.1e-07 60.1 158 29.1
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 9.1e-07 58.9 105 36.2
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 1.2e-06 58.5 147 33.3


User provided reference genes

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