Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 4.5e-135 484.6 241 100.0
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 2.4e-120 435.6 241 91.7
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 8.6e-102 374.0 246 81.7
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 7.3e-101 370.9 250 80.4
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 1.2e-100 370.2 246 81.3
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 8.0e-100 367.5 242 80.6
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 1.4e-75 287.0 244 63.5
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 1.8e-75 286.6 247 62.3
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 1.7e-73 280.0 252 61.5
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 6.4e-73 278.1 250 61.6
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 6.4e-73 278.1 248 60.9
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 1.1e-72 277.3 244 62.7
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 2.4e-72 276.2 248 60.1
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 4.2e-72 275.4 259 58.3
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 5.4e-72 275.0 259 59.1
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 9.3e-72 274.2 245 61.6
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 1.0e-70 270.8 270 57.4
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.7e-70 270.0 244 59.4
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 5.1e-70 268.5 255 59.6
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 1.1e-69 267.3 249 58.2
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 1.9e-69 266.5 254 59.4
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 4.3e-69 265.4 208 65.4
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 1.6e-68 263.5 245 60.8
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 2.1e-68 263.1 252 56.7
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 2.8e-68 262.7 246 58.5
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 3.6e-68 262.3 259 57.1
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 4.8e-68 261.9 248 60.5
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 6.2e-68 261.5 255 58.8
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 6.2e-68 261.5 247 57.1
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 1.1e-67 260.8 257 57.6
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 3.1e-67 259.2 243 60.1
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 5.3e-67 258.5 244 59.4
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 5.3e-67 258.5 242 57.9
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 6.9e-67 258.1 243 58.0
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 9.0e-67 257.7 213 60.1
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 1.5e-66 256.9 242 57.4
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 2.0e-66 256.5 242 56.6
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 2.0e-66 256.5 250 56.8
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 7.6e-66 254.6 248 54.8
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.7e-65 253.4 242 59.1
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 3.8e-65 252.3 246 57.3
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 6.4e-65 251.5 211 62.1
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 8.4e-65 251.1 219 62.1
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.1e-64 250.8 242 59.1
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.9e-64 250.0 243 57.6
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 1.9e-64 250.0 243 57.6
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 1.9e-64 250.0 243 57.6
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 1.9e-64 250.0 248 57.3
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 1.9e-64 250.0 249 56.6
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 2.4e-64 249.6 245 55.1
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 2.4e-64 249.6 246 56.9
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 3.2e-64 249.2 245 53.5
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 3.2e-64 249.2 218 61.0
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 4.2e-64 248.8 242 56.6
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 9.3e-64 247.7 244 57.4
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 1.2e-63 247.3 242 54.5
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 1.2e-63 247.3 243 57.2
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 2.1e-63 246.5 248 56.0
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 2.7e-63 246.1 244 55.7
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 2.7e-63 246.1 210 62.9
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 3.5e-63 245.7 249 56.6
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 7.9e-63 244.6 249 56.2
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 7.9e-63 244.6 245 57.1
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 1.3e-62 243.8 246 55.7
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 1.3e-62 243.8 250 56.0
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 2.3e-62 243.0 244 54.9
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 3.9e-62 242.3 251 51.8
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 5.1e-62 241.9 199 60.3
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 1.1e-61 240.7 245 54.7
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 1.5e-61 240.4 248 55.6
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 3.3e-61 239.2 223 57.4
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 5.6e-61 238.4 226 57.1
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 9.6e-61 237.7 251 51.0
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 2.1e-60 236.5 226 56.6
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 1.2e-58 230.7 245 54.7
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 1.5e-58 230.3 213 58.2
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 4.5e-58 228.8 217 56.2
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.7e-57 226.9 236 53.0
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 4.2e-56 222.2 244 52.0
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 5.5e-56 221.9 221 54.8
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 9.3e-56 221.1 202 55.9
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 9.3e-56 221.1 248 52.4
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 2.1e-55 219.9 215 54.9
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 5.1e-54 215.3 223 51.1
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 6.7e-54 214.9 312 45.5
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 8.7e-54 214.5 217 55.3
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 2.1e-52 209.9 207 52.7
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 1.8e-51 206.8 161 65.2
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.0e-49 201.1 137 67.9
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 1.1e-48 197.6 264 47.0
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 2.3e-46 189.9 142 66.9
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 1.6e-44 183.7 112 74.1
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.6e-44 183.7 115 72.2
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.8e-44 182.2 109 74.3
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 4.8e-44 182.2 106 78.3
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.9e-41 172.9 125 61.6
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 5.0e-41 172.2 141 56.0
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 1.1e-37 161.0 175 56.0
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.4e-35 154.1 102 74.5
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 3.4e-34 149.4 87 78.2
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 5.1e-30 135.6 153 47.7
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 1.7e-28 130.6 139 50.4
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 7.2e-24 115.2 137 52.6
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 2.7e-23 113.2 68 79.4
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 2.7e-23 113.2 68 79.4
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 7.4e-21 105.1 71 69.0
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 3.7e-20 102.8 85 62.4
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 6.3e-20 102.1 129 41.1
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 8.2e-20 101.7 151 43.0
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 7.0e-19 98.6 85 60.0
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 1.6e-18 97.4 189 32.8
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 7.7e-18 95.1 60 73.3
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 8.0e-15 85.1 191 31.9
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 7.7e-10 68.6 75 45.3
Oeu013881.1 Olea europaea HOM05D006876 ORTHO05D008708 1.3e-09 67.8 105 45.7
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 5.0e-09 65.9 66 57.6
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 6.5e-09 65.5 53 66.0
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 1.5e-08 64.3 53 64.2
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 1.5e-08 64.3 137 38.7


User provided reference genes

Program Settings