Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002119g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 2.0e-53 212.2 109 100.0
Nitab4.5_0000651g0280 Nicotiana tabacum HOM05D001578 ORTHO05D001207 3.7e-44 181.4 99 93.9
Peaxi162Scf01160g00142 Petunia axillaris HOM05D001578 ORTHO05D001207 1.8e-30 136.0 98 67.3
CAN.G484.68 Capsicum annuum HOM05D001578 ORTHO05D001207 1.3e-28 129.8 98 62.2
CAN.G1075.28 Capsicum annuum HOM05D001578 ORTHO05D001207 1.8e-27 125.9 94 64.9
Solyc12g099200.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 2.3e-25 119.0 99 62.6
Peaxi162Scf00228g00619 Petunia axillaris HOM05D000064 ORTHO05D001207 8.6e-25 117.1 88 71.6
Nitab4.5_0002150g0080 Nicotiana tabacum HOM05D001578 ORTHO05D001207 1.1e-24 116.7 86 68.6
PGSC0003DMG400004617 Solanum tuberosum HOM05D001578 ORTHO05D001207 1.5e-24 116.3 99 60.6
Solyc12g099210.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 1.9e-24 115.9 99 61.6
Sopen12g033880 Solanum pennellii HOM05D001578 ORTHO05D001207 2.1e-23 112.5 91 62.6
Nitab4.5_0004165g0070 Nicotiana tabacum HOM05D001578 ORTHO05D001207 1.0e-22 110.2 92 66.3
PGSC0003DMG400004618 Solanum tuberosum HOM05D001578 ORTHO05D001207 1.8e-22 109.4 99 58.6
Peaxi162Scf00364g00014 Petunia axillaris HOM05D001578 ORTHO05D001207 6.8e-22 107.5 98 59.2
CAN.G305.59 Capsicum annuum HOM05D001578 ORTHO05D001207 1.5e-21 106.3 101 54.5
Peaxi162Scf00548g00645 Petunia axillaris HOM05D001578 ORTHO05D001207 1.5e-21 106.3 98 58.2
CAN.G1359.1 Capsicum annuum HOM05D001578 ORTHO05D001207 1.6e-18 96.3 90 54.4
CAN.G913.13 Capsicum annuum HOM05D001578 ORTHO05D001207 2.8e-15 85.5 99 48.5
Cc03_g00600 Coffea canephora HOM05D001578 ORTHO05D001207 2.0e-13 79.3 79 49.4
CAN.G13.19 Capsicum annuum HOM05D001578 ORTHO05D001207 2.6e-13 79.0 68 55.9
CAN.G1692.2 Capsicum annuum HOM05D001578 ORTHO05D001207 1.4e-11 73.2 83 47.0
MSTRG.24829 Avicennia marina HOM05D001578 ORTHO05D001207 1.9e-11 72.8 97 42.3
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 3.2e-11 72.0 87 40.2
Peaxi162Scf01160g00112 Petunia axillaris HOM05D001578 ORTHO05D001207 1.2e-10 70.1 79 43.0
MSTRG.24828 Avicennia marina HOM05D001578 ORTHO05D001207 4.6e-10 68.2 97 40.2
HanXRQChr13g0395221 Helianthus annuus HOM05D001578 ORTHO05D001207 4.6e-10 68.2 98 41.8
Lsat_1_v5_gn_6_301 Lactuca sativa HOM05D001578 ORTHO05D001207 4.6e-10 68.2 80 46.2
Peaxi162Scf00228g00064 Petunia axillaris HOM05D001578 ORTHO05D001207 6.0e-10 67.8 91 34.1
CSS0020686 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 7.8e-10 67.4 106 42.5
CSS0012414 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 1.3e-09 66.6 106 40.6
ECA233G5780 Erigeron canadensis HOM05D001578 ORTHO05D001207 1.3e-09 66.6 78 43.6
Psat0s4829g0040 Pisum sativum HOM05D001578 ORTHO05D001207 1.3e-09 66.6 108 42.6
Lsat_1_v5_gn_5_185420 Lactuca sativa HOM05D001578 ORTHO05D001207 1.7e-09 66.2 80 41.2
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.7e-09 66.2 79 43.0
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 2.3e-09 65.9 97 36.1
TWI53G0804 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 2.3e-09 65.9 105 43.8
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 3.0e-09 65.5 98 35.7
Migut.N00030 Erythranthe guttata HOM05D001578 ORTHO05D001207 3.0e-09 65.5 89 42.7
MD03G1249700 Malus domestica HOM05D001578 ORTHO05D001207 3.0e-09 65.5 82 39.0
VMungo1215G0431 Vigna mungo HOM05D001578 ORTHO05D001207 3.0e-09 65.5 83 41.0
Glyma.20G029700 Glycine max HOM05D001578 ORTHO05D001207 3.9e-09 65.1 86 46.5
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 3.9e-09 65.1 95 33.7
Glyma.20G028900 Glycine max HOM05D001578 ORTHO05D001207 5.0e-09 64.7 86 46.5
Lalb_Chr12g0200781 Lupinus albus HOM05D001578 ORTHO05D001207 5.0e-09 64.7 98 40.8
MD03G1248700 Malus domestica HOM05D001578 ORTHO05D001207 5.0e-09 64.7 82 36.6
HanXRQChr13g0395151 Helianthus annuus HOM05D001578 ORTHO05D001207 8.6e-09 63.9 94 42.6
Glyma.20G028700 Glycine max HOM05D001578 ORTHO05D001207 1.1e-08 63.5 91 41.8
RcHm_v2.0_Chr2g0144321 Rosa chinensis HOM05D001578 ORTHO05D001207 1.1e-08 63.5 100 35.0
RcHm_v2.0_Chr7g0200071 Rosa chinensis HOM05D001578 ORTHO05D001207 1.1e-08 63.5 100 35.0
HanXRQChr13g0395201 Helianthus annuus HOM05D001578 ORTHO05D001207 1.5e-08 63.2 79 45.6
Lsat_1_v5_gn_5_185380 Lactuca sativa HOM05D001578 ORTHO05D001207 1.5e-08 63.2 80 40.0
ECA233G4032 Erigeron canadensis HOM05D001578 ORTHO05D001207 1.9e-08 62.8 64 45.3
Nitab4.5_0002294g0130 Nicotiana tabacum HOM05D001578 ORTHO05D001207 1.9e-08 62.8 81 38.3
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 1.9e-08 62.8 81 39.5
Glyma.20G029500 Glycine max HOM05D001578 ORTHO05D001207 2.5e-08 62.4 91 41.8
Lalb_Chr07g0181941 Lupinus albus HOM05D001578 ORTHO05D001207 3.3e-08 62.0 101 39.6
MD03G1250000 Malus domestica HOM05D001578 ORTHO05D001207 3.3e-08 62.0 82 36.6
RcHm_v2.0_Chr2g0143761 Rosa chinensis HOM05D001578 ORTHO05D001207 3.3e-08 62.0 100 34.0
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 4.3e-08 61.6 87 41.4
Sopen12g033870 Solanum pennellii HOM05D001578 ORTHO05D001207 4.3e-08 61.6 80 40.0
Glyma.20G029200 Glycine max HOM05D001578 ORTHO05D001207 5.6e-08 61.2 91 41.8
HanXRQChr13g0393461 Helianthus annuus HOM05D001578 ORTHO05D001207 5.6e-08 61.2 94 41.5
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 5.6e-08 61.2 96 33.3
Medtr4g122890 Medicago truncatula HOM05D001578 ORTHO05D001207 5.6e-08 61.2 86 39.5
QL06p012845 Quercus lobata HOM05D001578 ORTHO05D001207 5.6e-08 61.2 79 39.2
Solyc12g099190.1 Solanum lycopersicum HOM05D001578 ORTHO05D001207 5.6e-08 61.2 98 34.7
PGSC0003DMG400004616 Solanum tuberosum HOM05D001578 ORTHO05D001207 5.6e-08 61.2 80 42.5
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 7.3e-08 60.8 79 39.2
FvH4_5g04330 Fragaria vesca HOM05D001578 ORTHO05D001207 9.5e-08 60.5 98 38.8
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 9.5e-08 60.5 82 39.0
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 9.5e-08 60.5 82 39.0
HanXRQChr13g0395161 Helianthus annuus HOM05D001578 ORTHO05D001207 9.5e-08 60.5 97 40.2
Phvul.003G117300 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 9.5e-08 60.5 78 41.0
THA.LOC104820316 Tarenaya hassleriana HOM05D001578 ORTHO05D001207 9.5e-08 60.5 96 34.4
DCAR_023358 Daucus carota HOM05D001578 ORTHO05D001207 1.6e-07 59.7 97 37.1
FAN18G0021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.6e-07 59.7 98 38.8
Lsat_1_v5_gn_7_59300 Lactuca sativa HOM05D001578 ORTHO05D001207 1.6e-07 59.7 103 34.0
Lj3P834T43 Lonicera japonica HOM05D001578 ORTHO05D001207 1.6e-07 59.7 64 46.9
Nitab4.5_0002150g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 2.1e-07 59.3 79 38.0
MSTRG.16314 Avicennia marina HOM05D001578 ORTHO05D001207 2.8e-07 58.9 102 33.3
Haze_01339 Corylus avellana HOM05D001578 ORTHO05D001207 2.8e-07 58.9 101 35.6
FAN07G2152 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.8e-07 58.9 104 36.5
Glyma.20G029000 Glycine max HOM05D001578 ORTHO05D001207 2.8e-07 58.9 85 38.8
Sopen12g033890 Solanum pennellii HOM05D001578 ORTHO05D001207 2.8e-07 58.9 40 70.0
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 2.8e-07 58.9 81 39.5
Lsat_1_v5_gn_7_59360 Lactuca sativa HOM05D001578 ORTHO05D001207 3.6e-07 58.5 103 34.0
Lsat_1_v5_gn_7_59420 Lactuca sativa HOM05D001578 ORTHO05D001207 3.6e-07 58.5 103 34.0
MD13G1150200 Malus domestica HOM05D001578 ORTHO05D001207 3.6e-07 58.5 78 41.0
Medtr4g122750 Medicago truncatula HOM05D001578 ORTHO05D001207 3.6e-07 58.5 88 36.4
QL06p012837 Quercus lobata HOM05D001578 ORTHO05D001207 3.6e-07 58.5 109 34.9
Atru.chr4.3057 Acer truncatum HOM05D001578 ORTHO05D001207 4.7e-07 58.2 94 37.2
Haze_01334 Corylus avellana HOM05D001578 ORTHO05D001207 4.7e-07 58.2 101 35.6
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 4.7e-07 58.2 97 32.0
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 4.7e-07 58.2 94 38.3
Prupe.5G112600 Prunus persica HOM05D001578 ORTHO05D001207 4.7e-07 58.2 63 44.4
FvH4_1g05890 Fragaria vesca HOM05D001578 ORTHO05D001207 6.2e-07 57.8 85 35.3
FvH4_4g20430 Fragaria vesca HOM05D001578 ORTHO05D001207 6.2e-07 57.8 68 41.2
Lj3P834T42 Lonicera japonica HOM05D001578 ORTHO05D001207 6.2e-07 57.8 84 36.9
Phvul.003G117200 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 6.2e-07 57.8 107 35.5
SGA_v2.0_scaffold246G44798 Striga asiatica HOM05D001578 ORTHO05D001207 6.2e-07 57.8 100 33.0
BcaC08g42990 Brassica carinata HOM05D001578 ORTHO05D001207 8.0e-07 57.4 100 33.0
C06p02320 Brassica napus HOM05D001578 ORTHO05D001207 8.0e-07 57.4 100 33.0
Eucgr.H04068 Eucalyptus grandis HOM05D001578 ORTHO05D001207 8.0e-07 57.4 90 36.7
Eucgr.L02840 Eucalyptus grandis HOM05D001578 ORTHO05D001207 8.0e-07 57.4 90 36.7
MD03G1249600 Malus domestica HOM05D001578 ORTHO05D001207 8.0e-07 57.4 82 34.1
CAN.G1913.1 Capsicum annuum HOM05D001578 ORTHO05D001207 1.1e-06 57.0 58 50.0
Potri.009G083500 Populus trichocarpa HOM05D001578 ORTHO05D001207 1.1e-06 57.0 94 34.0
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 1.1e-06 57.0 108 36.1
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 1.4e-06 56.6 94 36.2
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.4e-06 56.6 94 36.2
MD13G1149800 Malus domestica HOM05D001578 ORTHO05D001207 1.4e-06 56.6 83 38.6
Phvul.003G117400 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.4e-06 56.6 107 34.6
MD16G1150000 Malus domestica HOM05D001578 ORTHO05D001207 1.8e-06 56.2 61 41.0
BcaB04g18932 Brassica carinata HOM05D001578 ORTHO05D001207 2.3e-06 55.8 79 36.7
FvH4_4g20440 Fragaria vesca HOM05D001578 ORTHO05D001207 2.3e-06 55.8 89 38.2
FAN12G2021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.3e-06 55.8 89 38.2
MD16G1150200 Malus domestica HOM05D001578 ORTHO05D001207 2.3e-06 55.8 83 37.3
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 2.3e-06 55.8 94 36.2
Actinidia18465 Actinidia chinensis HOM05D001578 ORTHO05D001207 3.1e-06 55.5 88 30.7
EL10Ac7g16354 Beta vulgaris HOM05D001578 ORTHO05D001207 3.1e-06 55.5 98 32.7
BcaC09g48670 Brassica carinata HOM05D001578 ORTHO05D001207 3.1e-06 55.5 79 36.7
A01p37160 Brassica napus HOM05D001578 ORTHO05D001207 3.1e-06 55.5 79 36.7
C01p47100 Brassica napus HOM05D001578 ORTHO05D001207 3.1e-06 55.5 79 36.7
BolC1t04676H Brassica oleracea HOM05D001578 ORTHO05D001207 3.1e-06 55.5 79 36.7
BraA01t03777Z Brassica rapa HOM05D001578 ORTHO05D001207 3.1e-06 55.5 79 36.7
Migut.M01936 Erythranthe guttata HOM05D001578 ORTHO05D001207 3.1e-06 55.5 79 36.7
Medtr4g122760 Medicago truncatula HOM05D001578 ORTHO05D001207 3.1e-06 55.5 109 31.2
Ciclev10006791m.g Citrus clementina HOM05D001578 ORTHO05D001207 4.0e-06 55.1 98 39.8
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 4.0e-06 55.1 86 37.2
Migut.N00031 Erythranthe guttata HOM05D001578 ORTHO05D001207 4.0e-06 55.1 108 31.5
Thhalv10011825m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 4.0e-06 55.1 82 35.4
Glyma.17G036400 Glycine max HOM05D001578 ORTHO05D001207 4.0e-06 55.1 86 37.2
HanXRQChr13g0395171 Helianthus annuus HOM05D001578 ORTHO05D001207 4.0e-06 55.1 79 40.5
MD13G1150300 Malus domestica HOM05D001578 ORTHO05D001207 4.0e-06 55.1 63 39.7
BolC6t35358H Brassica oleracea HOM05D001578 ORTHO05D001207 5.2e-06 54.7 100 33.0
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 5.2e-06 54.7 100 30.0
CARHR268400 Cardamine hirsuta HOM05D001578 ORTHO05D001207 5.2e-06 54.7 61 42.6
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 5.2e-06 54.7 93 35.5
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 5.2e-06 54.7 94 35.1
Thhalv10021672m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 5.2e-06 54.7 77 36.4
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 5.2e-06 54.7 77 36.4
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 6.8e-06 54.3 100 35.0
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 6.8e-06 54.3 95 35.8
Actinidia18466 Actinidia chinensis HOM05D001578 ORTHO05D001207 8.9e-06 53.9 82 36.6
Glyma.07G237300 Glycine max HOM05D001578 ORTHO05D001207 8.9e-06 53.9 110 30.9
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 8.9e-06 53.9 94 35.1


User provided reference genes

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