Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002116g0020 Nicotiana tabacum HOM05D003720 ORTHO05D017820 6.9e-63 243.8 124 100.0
Nitab4.5_0000237g0010 Nicotiana tabacum HOM05D003720 ORTHO05D005312 2.5e-44 182.2 94 96.8
CAN.G368.4 Capsicum annuum HOM05D003720 ORTHO05D005312 3.3e-41 171.8 92 91.3
Sopen08g011820 Solanum pennellii HOM05D003720 ORTHO05D005312 2.2e-40 169.1 91 92.3
Peaxi162Scf00256g00812 Petunia axillaris HOM05D003720 ORTHO05D017820 6.3e-40 167.5 92 90.2
Solyc08g021920.4 Solanum lycopersicum HOM05D003720 ORTHO05D005312 8.2e-40 167.2 91 91.2
PGSC0003DMG400013949 Solanum tuberosum HOM05D003720 ORTHO05D005312 1.1e-39 166.8 91 91.2
CiPaw.03G235900 Carya illinoinensis HOM05D003720 ORTHO05D005312 9.4e-36 153.7 90 84.4
Cfa003295 Carpinus fangiana HOM05D003720 ORTHO05D005312 2.7e-35 152.1 90 84.4
Haze_25676 Corylus avellana HOM05D003720 ORTHO05D005312 3.6e-35 151.8 89 85.4
Atru.chr7.1285 Acer truncatum HOM05D003720 ORTHO05D005312 7.9e-35 150.6 91 83.5
Cc06_g09260 Coffea canephora HOM05D003720 ORTHO05D005312 1.0e-34 150.2 90 82.2
Dinv36598 Davidia involucrata HOM05D003720 ORTHO05D005312 1.0e-34 150.2 90 82.2
Dinv41570 Davidia involucrata HOM05D003720 ORTHO05D005312 1.4e-34 149.8 91 80.2
Gorai.010G068600 Gossypium raimondii HOM05D003720 ORTHO05D005312 2.3e-34 149.1 91 83.5
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea HOM05D003720 ORTHO05D005312 3.0e-34 148.7 91 81.3
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea HOM05D003720 ORTHO05D005312 3.0e-34 148.7 91 81.3
RcHm_v2.0_Chr2g0089861 Rosa chinensis HOM05D003720 ORTHO05D005312 3.0e-34 148.7 91 76.9
Actinidia07451 Actinidia chinensis HOM05D003720 ORTHO05D005312 3.9e-34 148.3 89 80.9
Gohir.D06G058501 Gossypium hirsutum HOM05D003720 ORTHO05D005312 5.1e-34 147.9 91 82.4
CSS0011692 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 6.7e-34 147.5 91 79.1
CSS0041174 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 6.7e-34 147.5 91 79.1
Manes.03G068200 Manihot esculenta HOM05D003720 ORTHO05D005312 8.8e-34 147.1 93 80.6
Nn8g39280 Nelumbo nucifera HOM05D003720 ORTHO05D005312 8.8e-34 147.1 93 79.6
GSVIVG01015442001 Vitis vinifera HOM05D003720 ORTHO05D005312 1.1e-33 146.7 90 78.9
FvH4_1g04290 Fragaria vesca HOM05D003720 ORTHO05D005312 1.5e-33 146.4 91 76.9
FAN26G1450 Fragaria x ananassa HOM05D003720 ORTHO05D005312 1.5e-33 146.4 91 76.9
FAN28G0537 Fragaria x ananassa HOM05D003720 ORTHO05D005312 1.5e-33 146.4 91 76.9
MD15G1181200 Malus domestica HOM05D003720 ORTHO05D005312 1.5e-33 146.4 90 77.8
Actinidia26424 Actinidia chinensis HOM05D003720 ORTHO05D005312 2.0e-33 146.0 89 79.8
CANSAT56G4488 Cannabis sativa HOM05D003720 ORTHO05D005312 2.0e-33 146.0 93 80.6
Gohir.A06G060200 Gossypium hirsutum HOM05D003720 ORTHO05D005312 2.0e-33 146.0 91 82.4
FAN19G2601 Fragaria x ananassa HOM05D003720 ORTHO05D005312 3.3e-33 145.2 91 75.8
Rhsim03G0245400 Rhododendron simsii HOM05D003720 ORTHO05D005312 4.4e-33 144.8 91 76.9
Hma1.2p1_0245F.1_g101400 Hydrangea macrophylla HOM05D003720 ORTHO05D005312 7.4e-33 144.1 91 81.3
Lj4g0009521 Lotus japonicus HOM05D003720 ORTHO05D005312 7.4e-33 144.1 92 82.6
COL.COLO4_34941 Corchorus olitorius HOM05D003720 ORTHO05D005312 9.7e-33 143.7 87 83.9
MD02G1042600 Malus domestica HOM05D003720 ORTHO05D005312 9.7e-33 143.7 90 76.7
Oeu002223.1 Olea europaea HOM05D003720 ORTHO05D005312 9.7e-33 143.7 91 76.9
TPR.G26776 Trifolium pratense HOM05D003720 ORTHO05D005312 9.7e-33 143.7 91 79.1
TAR383G0813 Trochodendron aralioides HOM05D003720 ORTHO05D005312 1.3e-32 143.3 91 76.9
Potri.018G072600 Populus trichocarpa HOM05D003720 ORTHO05D005312 2.2e-32 142.5 91 80.2
Aqoxy7G01852 Aquilegia oxysepala HOM05D003720 ORTHO05D005312 3.7e-32 141.7 84 82.1
Glyma.05G012400 Glycine max HOM05D003720 ORTHO05D005312 3.7e-32 141.7 92 80.4
TAR626G1854 Trochodendron aralioides HOM05D003720 ORTHO05D005312 3.7e-32 141.7 90 77.8
VMungo1215G1596 Vigna mungo HOM05D003720 ORTHO05D005312 3.7e-32 141.7 92 79.3
Phvul.003G176300 Phaseolus vulgaris HOM05D003720 ORTHO05D005312 1.1e-31 140.2 92 79.3
Prupe.7G234400 Prunus persica HOM05D003720 ORTHO05D005312 1.8e-31 139.4 92 75.0
vmacro06189 Vaccinium macrocarpon HOM05D003720 ORTHO05D005312 2.4e-31 139.0 88 77.3
MSTRG.6069 Avicennia marina HOM05D003720 ORTHO05D005312 3.1e-31 138.7 88 76.1
Glyma.17G120500 Glycine max HOM05D003720 ORTHO05D005312 3.1e-31 138.7 92 78.3
Lalb_Chr13g0302281 Lupinus albus HOM05D003720 ORTHO05D005312 4.1e-31 138.3 92 77.2
Ciclev10007224m.g Citrus clementina HOM05D003720 ORTHO05D005312 5.3e-31 137.9 91 79.1
TWI63G0927 Tripterygium wilfordii HOM05D003720 ORTHO05D005312 5.3e-31 137.9 87 78.2
Thecc.09G115700 Theobroma cacao HOM05D003720 ORTHO05D005312 7.0e-31 137.5 91 78.0
Gohir.A05G021000 Gossypium hirsutum HOM05D003720 ORTHO05D005312 9.1e-31 137.1 91 76.9
Gohir.D05G022400 Gossypium hirsutum HOM05D003720 ORTHO05D005312 9.1e-31 137.1 91 76.9
Gorai.009G022700 Gossypium raimondii HOM05D003720 ORTHO05D005312 9.1e-31 137.1 91 76.9
ATR0561G176 Amborella trichopoda HOM05D003720 ORTHO05D005312 1.2e-30 136.7 93 74.2
QL02p086231 Quercus lobata HOM05D003720 ORTHO05D005312 1.2e-30 136.7 90 76.7
Duzib168G1140 Durio zibethinus HOM05D003720 ORTHO05D005312 2.6e-30 135.6 83 83.1
Eucgr.C04138 Eucalyptus grandis HOM05D003720 ORTHO05D005312 4.5e-30 134.8 89 75.3
EL10Ac8g19346 Beta vulgaris HOM05D003720 ORTHO05D005312 7.7e-30 134.0 90 76.7
PSO170G5328 Papaver somniferum HOM05D003720 ORTHO05D005312 1.3e-29 133.3 83 79.5
Cpa.g.sc23.157 Carica papaya HOM05D003720 ORTHO05D005312 1.7e-29 132.9 90 77.8
PSO357G0216 Papaver somniferum HOM05D003720 ORTHO05D005312 1.7e-29 132.9 83 79.5
AUR62027382 Chenopodium quinoa HOM05D003720 ORTHO05D005312 2.2e-29 132.5 90 73.3
PGR102G1985 Punica granatum HOM05D003720 ORTHO05D005312 2.2e-29 132.5 91 79.1
Hund12706 Selenicereus undatus HOM05D003720 ORTHO05D005312 3.8e-29 131.7 90 75.6
Lalb_Chr12g0197621 Lupinus albus HOM05D003720 ORTHO05D005312 5.0e-29 131.3 92 76.1
AUR62031297 Chenopodium quinoa HOM05D003720 ORTHO05D005312 6.5e-29 131.0 90 73.3
Medtr4g112045 Medicago truncatula HOM05D003720 ORTHO05D005312 6.5e-29 131.0 92 75.0
Sc08g0004790 Simmondsia chinensis HOM05D003720 ORTHO05D005312 1.9e-28 129.4 90 72.2
CsaV3_1G030910 Cucumis sativus L. HOM05D003720 ORTHO05D005312 2.5e-28 129.0 78 80.8
Os10g0575200 Oryza sativa ssp. japonica HOM05D003720 ORTHO05D005312 3.2e-28 128.6 78 79.5
Sed0024242 Sechium edule HOM05D003720 ORTHO05D005312 3.2e-28 128.6 74 82.4
ECA234G2971 Erigeron canadensis HOM05D003720 ORTHO05D005312 4.2e-28 128.3 88 73.9
Manes.16G064500 Manihot esculenta HOM05D003720 ORTHO05D005312 5.5e-28 127.9 89 75.3
ClCG06G010450 Citrullus lanatus HOM05D003720 ORTHO05D005312 9.4e-28 127.1 77 80.5
Sabra18G0064000 Salix brachista HOM05D003720 ORTHO05D005312 9.4e-28 127.1 77 83.1
HPP92_014850 Vanilla planifolia HOM05D003720 ORTHO05D005312 1.2e-27 126.7 94 69.1
SGA_v2.0_scaffold45G17079 Striga asiatica HOM05D003720 ORTHO05D005312 1.0e-26 123.6 78 78.2
Migut.J01184 Erythranthe guttata HOM05D003720 ORTHO05D005312 1.8e-26 122.9 78 79.5
DCAR_028737 Daucus carota HOM05D003720 ORTHO05D005312 4.0e-26 121.7 103 62.1
Lsat_1_v5_gn_5_99761 Lactuca sativa HOM05D003720 ORTHO05D005312 2.0e-25 119.4 88 70.5
Lj7C641G5 Lonicera japonica HOM05D003720 ORTHO05D005312 2.0e-25 119.4 67 86.6
CDE06G2493 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 3.3e-25 118.6 69 79.7
SEGI_35777 Sequoiadendron giganteum HOM05D003720 ORTHO05D005312 5.7e-25 117.9 83 69.9
CDE07G0366 Ceratophyllum demersum HOM05D003720 ORTHO05D017820 9.7e-25 117.1 69 78.3
Thhalv10001876m.g Eutrema salsugineum HOM05D003720 ORTHO05D005312 1.3e-24 116.7 69 81.2
Zm00001eb390320 Zea mays HOM05D003720 ORTHO05D005312 1.7e-24 116.3 89 66.3
unitig_22.g6633 Utricularia gibba HOM05D003720 ORTHO05D017820 2.2e-24 115.9 69 81.2
Aa31LG5G8890 Aethionema arabicum HOM05D003720 ORTHO05D005312 2.8e-24 115.5 69 79.7
CARHR119040 Cardamine hirsuta HOM05D003720 ORTHO05D005312 4.8e-24 114.8 75 74.7
THA.LOC104809021 Tarenaya hassleriana HOM05D003720 ORTHO05D005312 4.8e-24 114.8 85 74.1
AL4G20110 Arabidopsis lyrata HOM05D003720 ORTHO05D005312 6.3e-24 114.4 69 79.7
AT2G26890 Arabidopsis thaliana HOM05D003720 ORTHO05D005312 6.3e-24 114.4 69 79.7
Carub.0004s0739 Capsella rubella HOM05D003720 ORTHO05D005312 6.3e-24 114.4 69 79.7
Sp4g08590 Schrenkiella parvula HOM05D003720 ORTHO05D005312 6.3e-24 114.4 69 79.7
Ca_02544_v3 Cicer arietinum L. HOM05D003720 ORTHO05D005312 8.2e-24 114.0 126 54.8
SalBow6G2056 Salvia bowleyana HOM05D003720 ORTHO05D005312 2.4e-23 112.5 126 52.4
Dinv41561 Davidia involucrata HOM05D003720 ORTHO05D017820 4.1e-23 111.7 76 69.7
HanXRQChr10g0317421 Helianthus annuus HOM05D003720 ORTHO05D005312 5.3e-23 111.3 69 76.8
BolC4t23961H Brassica oleracea HOM05D003720 ORTHO05D005312 3.5e-22 108.6 72 76.4
A07p17900 Brassica napus HOM05D003720 ORTHO05D005312 4.5e-22 108.2 70 77.1
C04p24570 Brassica napus HOM05D003720 ORTHO05D005312 4.5e-22 108.2 70 77.1
BraA07t29508Z Brassica rapa HOM05D003720 ORTHO05D005312 4.5e-22 108.2 70 77.1
Mapoly0043s0138 Marchantia polymorpha HOM05D003720 ORTHO05D005312 1.7e-21 106.3 68 75.0
TAR374G0606 Trochodendron aralioides HOM05D003720 ORTHO05D017820 9.4e-20 100.5 68 75.0
Pp3c13_3460 Physcomitrium patens HOM05D003720 ORTHO05D005312 1.6e-19 99.8 90 57.8
Pp3c4_24650 Physcomitrium patens HOM05D003720 ORTHO05D005312 1.6e-19 99.8 65 72.3
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis HOM05D003720 ORTHO05D005312 2.1e-19 99.4 83 60.2
SMO358G0126 Selaginella moellendorffii HOM05D003720 ORTHO05D005312 3.6e-19 98.6 82 58.5
MELO3C025310.2 Cucumis melo HOM05D003720 ORTHO05D005312 1.2e-17 93.6 54 77.8
BcaC02g10846 Brassica carinata HOM05D003720 ORTHO05D005312 1.8e-15 86.3 47 80.9
CBR_g4479 Chara braunii HOM05D003720 ORTHO05D005312 5.9e-14 81.3 74 54.1
FvH4_5g24770 Fragaria vesca HOM05D067251 ORTHO05D017820 1.5e-09 66.6 86 50.0


User provided reference genes

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