Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 3.1e-218 761.5 385 100.0
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 9.8e-209 729.9 385 96.1
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 2.1e-206 722.2 385 93.0
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 2.5e-204 715.3 385 92.5
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 2.5e-204 715.3 385 92.5
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 1.1e-180 636.7 383 85.6
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 3.2e-175 618.6 385 79.5
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 1.8e-173 612.8 383 77.5
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.1e-172 610.1 383 76.5
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 9.6e-172 607.1 385 77.9
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.3e-171 606.7 385 77.9
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 1.3e-171 606.7 385 76.6
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.1e-171 605.9 385 77.1
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.1e-171 605.9 385 77.4
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 5.3e-170 601.3 385 76.9
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 5.3e-170 601.3 385 76.9
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 2.0e-169 599.4 401 75.1
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 2.0e-169 599.4 385 77.7
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 3.4e-169 598.6 382 78.0
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 4.5e-169 598.2 383 76.0
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 4.5e-169 598.2 384 77.3
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 5.8e-169 597.8 385 76.9
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.7e-168 596.3 383 75.5
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 2.2e-168 595.9 376 77.9
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 2.2e-168 595.9 380 78.9
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 3.8e-168 595.1 383 76.2
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 1.4e-167 593.2 383 76.5
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 2.5e-167 592.4 386 75.9
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 3.2e-167 592.0 383 75.7
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 5.5e-167 591.3 385 76.1
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 5.5e-167 591.3 383 73.6
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 6.0e-166 587.8 391 74.9
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 1.0e-165 587.0 382 75.1
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.3e-165 586.6 390 73.8
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 1.8e-165 586.3 382 75.4
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 1.8e-165 586.3 391 73.9
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.8e-165 586.3 392 75.3
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 1.1e-164 583.6 384 76.0
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 1.5e-164 583.2 385 74.0
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 4.3e-164 581.6 376 76.9
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 5.7e-164 581.3 383 73.4
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 3.7e-163 578.6 383 74.4
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 3.7e-163 578.6 382 74.3
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 3.7e-163 578.6 383 72.8
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 4.8e-163 578.2 383 73.4
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 6.3e-163 577.8 385 74.5
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 1.4e-162 576.6 385 73.8
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 2.4e-162 575.9 382 73.3
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 4.1e-162 575.1 383 73.6
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 6.9e-162 574.3 384 74.2
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 1.5e-161 573.2 385 72.5
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 2.6e-161 572.4 385 73.0
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 4.5e-161 571.6 383 72.6
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 5.9e-161 571.2 385 73.8
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 1.0e-160 570.5 378 72.8
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 6.5e-160 567.8 384 72.7
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 8.5e-160 567.4 379 73.6
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 7.2e-159 564.3 385 71.4
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 9.3e-159 563.9 388 71.1
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 1.6e-158 563.1 380 73.4
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 1.6e-158 563.1 380 73.4
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 3.6e-158 562.0 385 71.9
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.6e-158 561.6 376 71.8
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 1.3e-157 560.1 382 71.5
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 3.0e-157 558.9 385 73.5
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 3.9e-157 558.5 384 71.9
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 1.5e-156 556.6 383 71.0
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 1.9e-156 556.2 376 71.3
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 2.5e-156 555.8 386 71.5
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 2.5e-156 555.8 383 70.8
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 4.3e-156 555.1 385 71.7
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 5.7e-156 554.7 383 71.8
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 1.3e-155 553.5 382 72.0
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 3.7e-155 552.0 384 72.1
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 8.2e-155 550.8 390 70.5
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 5.3e-154 548.1 383 70.2
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 2.0e-153 546.2 383 68.4
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 7.7e-153 544.3 431 66.6
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 2.2e-152 542.7 381 70.3
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 3.2e-151 538.9 517 57.1
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 3.2e-151 538.9 383 72.6
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 1.2e-150 537.0 383 71.5
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 3.0e-149 532.3 380 68.2
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 1.1e-148 530.4 382 67.5
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 9.7e-148 527.3 375 69.9
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 2.2e-147 526.2 384 69.0
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 8.2e-147 524.2 385 68.3
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 1.1e-146 523.9 356 72.2
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 3.1e-146 522.3 347 74.4
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 6.9e-146 521.2 384 66.7
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 1.3e-144 516.9 382 67.3
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 4.2e-143 511.9 385 67.3
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 4.7e-142 508.4 385 68.1
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 1.4e-141 506.9 380 67.4
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 7.0e-138 494.6 309 78.0
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 1.2e-137 493.8 308 79.9
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.6e-137 492.7 351 71.2
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.2e-127 459.1 290 77.2
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 9.4e-127 457.6 381 63.8
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 1.3e-123 447.2 331 69.5
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.7e-123 446.8 290 75.2
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 5.9e-121 438.3 310 72.6
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.3e-120 437.2 306 71.2
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 8.8e-117 424.5 281 73.3
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 7.5e-116 421.4 374 55.6
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 1.3e-115 420.6 381 56.2
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 4.5e-113 412.1 381 55.1
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 5.0e-112 408.7 380 55.5
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 7.5e-108 394.8 403 50.9
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 5.4e-106 388.7 376 58.2
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 2.3e-104 383.3 231 75.8
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 1.9e-103 380.2 267 69.7
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 3.0e-96 356.3 233 76.4
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 2.6e-92 343.2 270 65.2
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 1.0e-72 278.1 153 94.8
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 5.6e-71 272.3 237 62.9
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 6.0e-65 252.3 155 76.8
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 1.5e-60 237.7 395 35.9
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 9.9e-60 235.0 426 36.9
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 4.9e-59 232.6 426 36.9
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 5.8e-52 209.1 152 69.1
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 4.8e-46 189.5 115 84.3
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 5.1e-40 169.5 107 72.0
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 1.5e-28 131.3 182 40.7
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 8.8e-24 115.5 65 81.5
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 4.8e-22 109.8 145 47.6
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 4.8e-22 109.8 191 37.7
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.6e-20 104.8 149 41.6
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 4.2e-18 96.7 103 52.4
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 2.1e-17 94.4 68 72.1
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 1.6e-12 78.2 69 52.2
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-11 75.1 70 52.9
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 1.7e-11 74.7 111 39.6
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 4.2e-10 70.1 36 86.1
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 5.2e-08 63.2 36 77.8
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.4e-07 60.1 88 38.6


User provided reference genes

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