Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.1e-56 223.4 122 100.0
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.6e-44 181.8 120 85.8
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.1e-43 177.9 122 73.8
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-41 172.6 116 86.2
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.9e-40 167.5 98 82.7
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-38 162.5 109 86.2
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.1e-36 156.0 121 76.9
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.7e-36 154.8 98 78.6
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.5e-34 149.8 106 82.1
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.2e-29 132.1 77 84.4
Nitab4.5_0007420g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.7e-28 129.0 79 94.9
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 2.7e-28 129.0 94 68.1
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 3.5e-23 112.1 95 65.3
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 4.7e-20 101.7 90 63.3
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 2.3e-19 99.4 90 62.2
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 8.8e-19 97.4 92 57.6
PGSC0003DMG400020028 Solanum tuberosum HOM05D007556 ORTHO05D002252 1.4e-16 90.1 90 54.4
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 1.2e-15 87.0 92 51.1
PGSC0003DMG400009559 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.0e-15 86.3 90 52.2
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.2e-14 82.8 98 45.9
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 2.2e-14 82.8 96 43.8
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 5.0e-14 81.6 98 45.9
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 8.5e-14 80.9 96 42.7
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 5.5e-13 78.2 73 54.8
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 7.2e-13 77.8 88 45.5
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 1.6e-12 76.6 97 44.3
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.1e-12 76.3 98 40.8
PGSC0003DMG400009558 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.1e-12 76.3 84 50.0
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 2.7e-12 75.9 97 44.3
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 3.6e-12 75.5 96 41.7
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 6.1e-12 74.7 108 38.0
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.3e-11 72.8 102 43.1
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 2.3e-11 72.8 98 45.9
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 3.0e-11 72.4 89 44.9
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 4.0e-11 72.0 98 42.9
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 4.0e-11 72.0 97 41.2
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 5.2e-11 71.6 122 39.3
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 6.8e-11 71.2 91 42.9
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 6.8e-11 71.2 98 38.8
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 8.8e-11 70.9 98 42.9
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.2e-10 70.5 102 42.2
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 2.0e-10 69.7 91 46.2
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 2.0e-10 69.7 85 48.2
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 2.0e-10 69.7 91 39.6
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.6e-10 69.3 98 41.8
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.4e-10 68.9 103 40.8
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.4e-10 68.9 105 39.0
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 4.4e-10 68.6 104 39.4
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 5.7e-10 68.2 91 46.2
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 5.7e-10 68.2 91 41.8
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 5.7e-10 68.2 98 40.8
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.3e-09 67.0 121 37.2
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.3e-09 67.0 103 41.7
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 2.8e-09 65.9 86 39.5
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 3.7e-09 65.5 104 36.5
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 4.8e-09 65.1 77 39.0
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 6.3e-09 64.7 92 42.4
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 8.3e-09 64.3 94 38.3
Manes.10G047933 Manihot esculenta HOM05D007556 ORTHO05D002252 8.3e-09 64.3 92 41.3
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.1e-08 63.9 87 37.9
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 1.1e-08 63.9 79 41.8
Cc02_g17690 Coffea canephora HOM05D007556 ORTHO05D002252 1.4e-08 63.5 107 40.2
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.4e-08 63.5 81 40.7
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.4e-08 63.5 96 38.5
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.8e-08 63.2 97 42.3
Peaxi162Scf00684g00330 Petunia axillaris HOM05D058148 ORTHO05D306638 1.8e-08 63.2 87 48.3
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 2.4e-08 62.8 85 41.2
Peaxi162Scf00684g00049 Petunia axillaris HOM05D007556 ORTHO05D002252 2.4e-08 62.8 59 61.0
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 2.4e-08 62.8 92 34.8
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.1e-08 62.4 113 37.2
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 7.0e-08 61.2 98 36.7
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 7.0e-08 61.2 98 34.7
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 7.0e-08 61.2 79 44.3
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 7.0e-08 61.2 99 33.3
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 7.0e-08 61.2 99 33.3
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 7.0e-08 61.2 98 35.7
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 9.1e-08 60.8 91 38.5
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 9.1e-08 60.8 79 45.6
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 9.1e-08 60.8 76 40.8
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 9.1e-08 60.8 80 40.0
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.2e-07 60.5 99 33.3
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.2e-07 60.5 98 33.7
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.6e-07 60.1 67 52.2
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.0e-07 59.7 113 36.3
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 2.7e-07 59.3 111 36.9
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 2.7e-07 59.3 98 40.8
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 2.7e-07 59.3 89 36.0
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 2.7e-07 59.3 79 44.3
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.7e-07 59.3 79 43.0
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.7e-07 59.3 98 32.7
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 2.7e-07 59.3 80 43.8
Cc07_g14570 Coffea canephora HOM05D007227 ORTHO05D002252 3.5e-07 58.9 91 31.9
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.5e-07 58.9 98 32.7
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 3.5e-07 58.9 84 38.1
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 3.5e-07 58.9 101 41.6
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 3.5e-07 58.9 78 39.7
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 4.5e-07 58.5 83 38.6
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 4.5e-07 58.5 100 36.0
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 4.5e-07 58.5 82 40.2
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 4.5e-07 58.5 86 39.5
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 5.9e-07 58.2 94 37.2
CiPaw.06G136400 Carya illinoinensis HOM05D007556 ORTHO05D002252 7.7e-07 57.8 103 35.0
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 7.7e-07 57.8 82 37.8
SalBow3G1687 Salvia bowleyana HOM05D007227 ORTHO05D002252 7.7e-07 57.8 73 41.1
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 7.7e-07 57.8 98 32.7
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 7.7e-07 57.8 58 46.6
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 1.0e-06 57.4 79 36.7
EL10Ac4g09227 Beta vulgaris HOM05D037403 ORTHO05D002252 1.0e-06 57.4 86 37.2
AUR62011343 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.0e-06 57.4 82 39.0
AUR62011345 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.0e-06 57.4 82 39.0
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 1.0e-06 57.4 78 44.9
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 1.0e-06 57.4 93 37.6
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 1.3e-06 57.0 92 38.0
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 1.3e-06 57.0 98 34.7
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 1.3e-06 57.0 82 40.2
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 1.3e-06 57.0 107 41.1
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 1.3e-06 57.0 77 40.3
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 1.3e-06 57.0 77 40.3
AUR62016715 Chenopodium quinoa HOM05D013587 ORTHO05D002252 2.3e-06 56.2 93 36.6
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 2.9e-06 55.8 98 34.7
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 2.9e-06 55.8 82 34.1
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 3.8e-06 55.5 67 44.8
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.8e-06 55.5 103 35.0
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 3.8e-06 55.5 93 34.4
PGR042G2841 Punica granatum HOM05D007227 ORTHO05D002252 3.8e-06 55.5 83 41.0
TWI79G1510 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 3.8e-06 55.5 98 40.8
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 5.0e-06 55.1 78 35.9
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 5.0e-06 55.1 104 36.5
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 5.0e-06 55.1 83 38.6
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 5.0e-06 55.1 82 40.2
TPR.G38150 Trifolium pratense HOM05D010359 ORTHO05D002252 5.0e-06 55.1 86 33.7
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 5.0e-06 55.1 82 35.4
CAN.G132.4 Capsicum annuum HOM05D007556 ORTHO05D002252 6.6e-06 54.7 59 50.8
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 6.6e-06 54.7 52 48.1
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 6.6e-06 54.7 93 36.6
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 6.6e-06 54.7 51 47.1
Hund00291 Selenicereus undatus HOM05D013587 ORTHO05D002252 6.6e-06 54.7 76 35.5
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 6.6e-06 54.7 99 35.4
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 8.6e-06 54.3 49 46.9


User provided reference genes

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