Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002098g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.4e-239 832.8 449 100.0
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-137 493.8 604 54.5
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.1e-125 452.2 684 47.1
Nitab4.5_0019527g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.7e-116 421.4 423 62.4
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.5e-113 412.5 688 46.2
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.7e-113 411.8 392 65.1
Nitab4.5_0011961g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.8e-108 394.8 391 64.2
Nitab4.5_0013596g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.1e-102 375.6 559 47.4
Nitab4.5_0008534g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-93 346.7 414 57.2
Nitab4.5_0000890g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.2e-90 335.1 487 50.9
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-88 330.1 668 41.3
Nitab4.5_0000584g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-86 324.7 548 46.4
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.5e-84 315.5 670 40.4
Nitab4.5_0000697g0240 Nicotiana tabacum HOM05D005063 ORTHO05D010498 8.3e-83 312.0 507 48.9
Nitab4.5_0002806g0010 Nicotiana tabacum HOM05D005063 ORTHO05D005463 1.1e-82 311.6 530 46.6
Nitab4.5_0003079g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-79 301.6 275 68.4
Nitab4.5_0000377g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-75 287.0 587 41.7
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.9e-75 286.2 448 49.8
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.5e-73 280.0 285 62.8
Nitab4.5_0000829g0120 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-68 264.6 558 41.4
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-67 261.2 451 45.9
Nitab4.5_0002072g0090 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-66 258.5 575 40.2
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-66 256.9 417 46.8
Nitab4.5_0006698g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 7.1e-66 255.8 462 45.7
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-64 250.4 453 44.6
Nitab4.5_0005484g0010 Nicotiana tabacum HOM05D005063 ORTHO05D016873 8.6e-64 248.8 492 43.5
Nitab4.5_0000036g0370 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.6e-62 243.4 410 45.1
Nitab4.5_0002338g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.4e-61 240.7 515 41.6
Nitab4.5_0000584g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.4e-60 236.9 314 50.0
Nitab4.5_0003408g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.4e-59 232.6 203 61.6
Nitab4.5_0000498g0110 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.5e-55 221.5 342 50.9
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-54 218.0 709 34.4
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-54 217.2 396 41.9
Nitab4.5_0001047g0110 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.1e-54 215.7 470 39.8
Nitab4.5_0003911g0070 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.0e-52 211.1 235 55.3
Nitab4.5_0006001g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.6e-52 210.7 348 49.1
Nitab4.5_0000482g0120 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.4e-51 206.1 379 44.1
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.9e-50 204.5 398 44.0
Nitab4.5_0000044g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.2e-49 201.8 258 56.6
Nitab4.5_0001530g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.3e-47 193.7 295 50.8
Nitab4.5_0001308g0080 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.6e-47 192.2 216 52.8
Nitab4.5_0014828g0010 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.1e-46 191.0 354 46.6
Nitab4.5_0002786g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.8e-46 190.7 244 50.8
Nitab4.5_0002661g0070 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.6e-46 190.3 234 51.3
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.9e-45 186.0 309 49.2
Nitab4.5_0002944g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.7e-43 181.4 203 52.7
Nitab4.5_0000021g0950 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.9e-42 177.9 244 50.4
Nitab4.5_0001663g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.1e-42 176.0 291 52.9
Nitab4.5_0001927g0120 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.0e-40 170.6 181 53.0
Nitab4.5_0001552g0110 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.9e-40 170.2 471 38.6
Nitab4.5_0002297g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.7e-40 169.1 520 33.7
Nitab4.5_0000103g0320 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.8e-35 153.7 490 35.5
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 4.2e-34 150.2 150 55.3
Nitab4.5_0000786g0250 Nicotiana tabacum HOM05D005063 ORTHO05D010498 7.4e-31 139.4 336 36.9
Nitab4.5_0001927g0100 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.1e-30 137.9 297 35.7
Nitab4.5_0002951g0080 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.8e-30 136.7 73 89.0
Nitab4.5_0003911g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 8.2e-30 136.0 73 89.0
Nitab4.5_0000228g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.2e-28 132.1 282 46.1
Nitab4.5_0002661g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-28 131.3 127 58.3
Nitab4.5_0000102g0280 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-26 124.8 457 34.1
Nitab4.5_0000522g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.1e-25 119.8 124 55.6
Nitab4.5_0002926g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.1e-25 119.8 149 50.3
Nitab4.5_0007137g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.1e-25 119.8 103 58.3
Nitab4.5_0002926g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.0e-24 117.5 214 42.1
Nitab4.5_0000102g0290 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.9e-23 114.8 199 40.7
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.7e-23 112.5 336 29.2
Nitab4.5_0004196g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.8e-22 110.9 342 31.6
Nitab4.5_0001810g0070 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.8e-22 110.2 221 43.9
Nitab4.5_0000522g0050 Nicotiana tabacum HOM05D005063 ORTHO05D016873 1.5e-20 105.1 149 47.0
Nitab4.5_0007303g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.4e-20 104.0 371 33.7
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-19 102.4 107 58.9
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-19 100.9 129 49.6
Nitab4.5_0004899g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-18 97.1 114 52.6
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 1.2e-17 95.5 366 24.6
Nitab4.5_0000008g0770 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.7e-17 94.4 79 58.2
Nitab4.5_0001927g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.3e-16 91.3 56 76.8
Nitab4.5_0000935g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-16 90.9 111 54.1
Nitab4.5_0006001g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-16 90.9 49 83.7
Nitab4.5_0004118g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-16 90.5 140 57.1
Nitab4.5_0004899g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 8.8e-16 89.4 58 72.4
Nitab4.5_0000522g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.1e-15 89.0 119 59.7
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-15 89.0 129 45.7
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.1e-15 89.0 138 39.1
Nitab4.5_0001663g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.5e-15 87.8 107 53.3
Nitab4.5_0006617g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.3e-15 87.0 110 64.5
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.3e-15 87.0 83 47.0
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 1.3e-14 85.5 372 26.6
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-14 85.1 129 43.4
Nitab4.5_0000482g0190 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.7e-14 85.1 58 74.1
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.7e-14 85.1 363 26.7
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-13 82.4 104 40.4
Nitab4.5_0012202g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.9e-13 79.7 109 47.7
Nitab4.5_0004118g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.2e-12 79.0 52 76.9
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-12 78.6 378 24.6
Nitab4.5_0007360g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.4e-12 77.4 44 86.4
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 4.5e-12 77.0 374 24.9
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 7.7e-12 76.3 180 31.1
Nitab4.5_0000246g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.3e-11 75.5 91 51.6
Nitab4.5_0000008g0750 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-11 75.1 100 51.0
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.5e-11 73.2 128 40.6
CAN.G644.13 Capsicum annuum HOM05D000022 ORTHO05D000482 8.5e-11 72.8 66 45.5
Nitab4.5_0002944g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.5e-11 72.8 135 40.7
CAN.G1169.9 Capsicum annuum HOM05D005063 ORTHO05D000482 1.9e-10 71.6 149 31.5
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.5e-10 71.2 117 38.5
Nitab4.5_0000730g0140 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.5e-10 71.2 48 83.3
Nitab4.5_0000730g0150 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.5e-10 71.2 227 29.1
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-10 70.9 185 29.2
Nitab4.5_0001267g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-09 68.6 99 37.4
Nitab4.5_0000246g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.1e-09 66.6 46 67.4
Nitab4.5_0000008g0760 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.4e-08 65.5 42 78.6
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.4e-08 65.5 179 27.9
CAN.G374.2 Capsicum annuum HOM05D005063 ORTHO05D000482 1.8e-08 65.1 62 48.4
Nitab4.5_0000113g0280 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-08 65.1 79 38.0
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.8e-08 65.1 75 38.7
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 2.3e-08 64.7 85 35.3
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 2.3e-08 64.7 85 35.3
CAN.G1469.2 Capsicum annuum HOM05D002262 ORTHO05D000137 6.7e-08 63.2 45 55.6
Nitab4.5_0000487g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.7e-08 63.2 188 28.2
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.8e-08 62.8 86 36.0
Nitab4.5_0004899g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.1e-07 62.4 73 49.3
Nitab4.5_0000730g0160 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-07 61.6 106 45.3
Nitab4.5_0004196g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-07 61.2 109 45.0
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.7e-07 60.1 92 31.5
Peaxi162Scf00257g00136 Petunia axillaris HOM05D005063 ORTHO05D016873 5.7e-07 60.1 107 32.7
Nitab4.5_0000649g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.4e-07 59.7 77 35.1
Nitab4.5_0024925g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.4e-07 59.7 76 35.5
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 2.2e-06 58.2 90 34.4
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.8e-06 57.8 83 38.6
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 3.7e-06 57.4 85 35.3
Nitab4.5_0004899g0090 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.8e-06 57.0 32 84.4


User provided reference genes

Program Settings