Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002094g0070 Nicotiana tabacum HOM05D003429 ORTHO05D003873 5.8e-43 177.2 91 100.0
Nitab4.5_0000211g0050 Nicotiana tabacum HOM05D003429 ORTHO05D003873 1.3e-42 176.0 91 98.9
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 3.2e-41 171.4 91 95.6
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 7.9e-40 166.8 91 93.4
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 1.8e-39 165.6 91 92.3
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 8.1e-37 156.8 91 84.6
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 8.1e-37 156.8 91 84.6
vmacro07757 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 8.1e-37 156.8 91 84.6
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 1.2e-35 152.9 91 82.4
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 2.0e-35 152.1 91 82.4
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 2.9e-34 148.3 91 80.2
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 3.8e-34 147.9 91 79.1
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 4.9e-34 147.5 91 79.1
QL04p022451 Quercus lobata HOM05D003429 ORTHO05D003873 4.9e-34 147.5 90 78.9
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 1.1e-33 146.4 91 79.1
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 1.1e-33 146.4 91 76.9
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 1.4e-33 146.0 91 78.0
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 1.4e-33 146.0 91 78.0
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 1.9e-33 145.6 91 78.0
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 2.4e-33 145.2 91 76.9
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 2.4e-33 145.2 91 76.9
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 2.4e-33 145.2 91 76.9
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 2.4e-33 145.2 91 76.9
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 2.4e-33 145.2 91 76.9
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 2.4e-33 145.2 91 79.1
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 3.2e-33 144.8 91 78.0
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 4.2e-33 144.4 91 78.0
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 4.2e-33 144.4 91 78.0
Prupe.2G051400 Prunus persica HOM05D003429 ORTHO05D003873 4.2e-33 144.4 91 78.0
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 4.2e-33 144.4 91 76.9
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 5.5e-33 144.1 91 76.9
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 5.5e-33 144.1 91 76.9
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 5.5e-33 144.1 91 75.8
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 5.5e-33 144.1 91 75.8
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 5.5e-33 144.1 91 75.8
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 5.5e-33 144.1 91 75.8
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 7.1e-33 143.7 91 78.0
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 7.1e-33 143.7 91 76.9
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 7.1e-33 143.7 91 76.9
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 7.1e-33 143.7 91 76.9
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 7.1e-33 143.7 91 78.0
VMungo1309G0597 Vigna mungo HOM05D003429 ORTHO05D003873 7.1e-33 143.7 91 76.9
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 9.3e-33 143.3 88 77.3
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 9.3e-33 143.3 91 74.7
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 1.2e-32 142.9 91 75.8
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 1.2e-32 142.9 90 76.7
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 1.2e-32 142.9 91 75.8
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 1.6e-32 142.5 91 76.9
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 1.6e-32 142.5 91 76.9
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 2.1e-32 142.1 90 76.7
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 2.1e-32 142.1 91 75.8
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 2.1e-32 142.1 91 75.8
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 2.1e-32 142.1 91 75.8
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 2.7e-32 141.7 91 76.9
Dinv04984 Davidia involucrata HOM05D003429 ORTHO05D003873 2.7e-32 141.7 91 74.7
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 2.7e-32 141.7 91 76.9
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 3.5e-32 141.4 91 75.8
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 3.5e-32 141.4 91 75.8
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 3.5e-32 141.4 91 74.7
Ca_15294_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 4.6e-32 141.0 91 74.7
Oeu008545.1 Olea europaea HOM05D003429 ORTHO05D003873 4.6e-32 141.0 91 73.6
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 6.0e-32 140.6 91 74.7
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 6.0e-32 140.6 91 75.8
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 6.0e-32 140.6 91 74.7
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 1.3e-31 139.4 91 74.7
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 1.3e-31 139.4 91 74.7
Sc09g0004760 Simmondsia chinensis HOM05D003429 ORTHO05D003873 1.3e-31 139.4 91 73.6
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.8e-31 139.0 97 72.2
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.8e-31 139.0 97 72.2
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 2.3e-31 138.7 91 74.7
HPP92_028456 Vanilla planifolia HOM05D003429 ORTHO05D003873 2.3e-31 138.7 91 73.6
HPP92_028715 Vanilla planifolia HOM05D003429 ORTHO05D003873 2.3e-31 138.7 91 73.6
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 3.0e-31 138.3 91 73.6
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 3.9e-31 137.9 97 73.2
CARHR206820 Cardamine hirsuta HOM05D003429 ORTHO05D003873 3.9e-31 137.9 90 74.4
Os03g0616700 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 3.9e-31 137.9 90 72.2
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 5.1e-31 137.5 97 71.1
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 5.1e-31 137.5 88 73.9
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 8.7e-31 136.7 93 74.2
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 8.7e-31 136.7 91 72.5
CDE07G0955 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 1.1e-30 136.3 91 70.3
BcaC06g32583 Brassica carinata HOM05D000478 ORTHO05D000345 1.9e-30 135.6 91 73.6
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 2.5e-30 135.2 91 73.6
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 2.5e-30 135.2 91 72.5
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 3.3e-30 134.8 105 67.6
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 3.3e-30 134.8 91 71.4
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 5.6e-30 134.0 91 72.5
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 5.6e-30 134.0 91 72.5
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 9.6e-30 133.3 91 70.3
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 1.3e-29 132.9 91 69.2
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 1.3e-29 132.9 91 69.2
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 1.3e-29 132.9 91 71.4
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 1.3e-29 132.9 91 70.3
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 2.8e-29 131.7 81 77.8
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 3.7e-29 131.3 91 70.3
GSVIVG01021243001 Vitis vinifera HOM05D003429 ORTHO05D003873 6.2e-29 130.6 86 74.4
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 1.4e-28 129.4 91 69.2
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 1.8e-28 129.0 91 70.3
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 2.4e-28 128.6 98 66.3
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 3.1e-28 128.3 98 68.4
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 5.3e-28 127.5 91 69.2
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 6.9e-28 127.1 98 67.3
Ca_29535_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.2e-27 126.3 87 69.0
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 1.5e-27 125.9 91 68.1
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 2.6e-27 125.2 122 56.6
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 2.6e-27 125.2 87 67.8
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 3.4e-27 124.8 87 71.3
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 3.4e-27 124.8 87 69.0
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 2.2e-26 122.1 81 69.1
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 4.9e-26 120.9 91 69.2
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 1.1e-25 119.8 91 61.5
PRCOL_00000821 Prasinoderma coloniale HOM05D003429 ORTHO05D003873 4.2e-25 117.9 90 63.3
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 5.5e-25 117.5 87 64.4
Manes.03G089519 Manihot esculenta HOM05D003429 ORTHO05D003873 9.3e-25 116.7 91 67.0
Manes.13G093344 Manihot esculenta HOM05D003429 ORTHO05D003873 9.3e-25 116.7 91 67.0
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 2.1e-24 115.5 107 57.9
Glyma.10G104900 Glycine max HOM05D003429 ORTHO05D003873 3.5e-24 114.8 87 64.4
Psat6g086480 Pisum sativum HOM05D003429 ORTHO05D003873 1.0e-23 113.2 87 63.2
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 8.7e-23 110.2 91 59.3
AUR62018434 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.3e-21 106.3 91 57.1
MCO13G155 Micromonas commoda HOM05D003429 ORTHO05D003873 1.6e-21 105.9 86 54.7
GSVIVG01025856001 Vitis vinifera HOM05D003429 ORTHO05D003873 1.6e-21 105.9 67 73.1
AUR62020999 Chenopodium quinoa HOM05D003429 ORTHO05D003873 6.3e-21 104.0 91 57.1
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 1.2e-19 99.8 100 48.0
Cre02.g141506 Chlamydomonas reinhardtii HOM05D003429 ORTHO05D003873 3.4e-19 98.2 90 47.8
Manes.13G089800 Manihot esculenta HOM05D003429 ORTHO05D003873 4.6e-16 87.8 63 68.3
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 7.9e-16 87.0 53 77.4
AUR62035521 Chenopodium quinoa HOM05D003429 ORTHO05D003873 3.0e-15 85.1 63 65.1
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 1.3e-13 79.7 45 82.2
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 2.8e-13 78.6 53 73.6
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 6.3e-13 77.4 45 80.0
DCAR_022673 Daucus carota HOM05D003429 ORTHO05D003873 1.4e-12 76.3 47 76.6
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 1.8e-12 75.9 39 89.7
FAN10G3011 Fragaria x ananassa HOM05D003429 ORTHO05D003873 5.9e-11 70.9 47 70.2
CBR_g30950 Chara braunii HOM05D003429 ORTHO05D003873 2.2e-10 68.9 45 68.9
Os01g0278200 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 6.5e-10 67.4 46 65.2
Nn1g02902 Nelumbo nucifera HOM05D003429 ORTHO05D003873 2.5e-09 65.5 43 72.1
Ca_14866_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 4.2e-09 64.7 44 65.9
SHI25005 Sapria himalayana HOM05D003429 ORTHO05D003873 9.4e-09 63.5 83 44.6
Lsat_1_v5_gn_8_67461 Lactuca sativa HOM05D003429 ORTHO05D003873 1.6e-08 62.8 35 80.0
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 6.1e-08 60.8 33 81.8
AUR62041296 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.3e-07 58.9 32 81.2
Ah.04g150250 Amaranthus hybridus HOM05D003429 ORTHO05D003873 6.7e-07 57.4 59 54.2


User provided reference genes

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