Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002094g0060 Nicotiana tabacum HOM05D003429 ORTHO05D003873 3.1e-38 161.4 86 100.0
Nitab4.5_0000211g0090 Nicotiana tabacum HOM05D003429 ORTHO05D003873 1.5e-37 159.1 85 98.8
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 1.9e-35 152.1 82 97.6
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 2.5e-35 151.8 82 96.3
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 1.2e-34 149.4 82 96.3
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 6.1e-34 147.1 82 92.7
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 6.1e-34 147.1 81 93.8
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 1.4e-33 146.0 82 91.5
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 2.3e-33 145.2 82 91.5
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 3.0e-33 144.8 82 92.7
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 3.0e-33 144.8 82 91.5
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 3.0e-33 144.8 82 91.5
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 3.0e-33 144.8 82 91.5
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 3.0e-33 144.8 82 91.5
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 3.0e-33 144.8 82 91.5
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 3.9e-33 144.4 82 90.2
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 5.2e-33 144.1 82 90.2
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 6.7e-33 143.7 82 90.2
vmacro07589 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 6.7e-33 143.7 81 91.4
Lj9A653G52 Lonicera japonica HOM05D003429 ORTHO05D003873 8.8e-33 143.3 82 91.5
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 1.1e-32 142.9 82 91.5
AUR62041296 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.1e-32 142.9 82 90.2
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 1.1e-32 142.9 82 90.2
Nn7g37083 Nelumbo nucifera HOM05D003429 ORTHO05D003873 1.1e-32 142.9 82 91.5
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 1.5e-32 142.5 81 91.4
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 1.5e-32 142.5 82 90.2
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 2.0e-32 142.1 82 89.0
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 2.0e-32 142.1 82 89.0
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 2.0e-32 142.1 82 89.0
Cpa.g.sc33.146 Carica papaya HOM05D003429 ORTHO05D003873 2.6e-32 141.7 82 90.2
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 2.6e-32 141.7 85 87.1
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 2.6e-32 141.7 85 87.1
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 3.3e-32 141.4 82 90.2
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 4.4e-32 141.0 82 89.0
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 4.4e-32 141.0 82 89.0
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 7.4e-32 140.2 82 87.8
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 7.4e-32 140.2 82 89.0
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 7.4e-32 140.2 85 85.9
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 9.7e-32 139.8 82 87.8
GSVIVG01025857001 Vitis vinifera HOM05D003429 ORTHO05D003873 9.7e-32 139.8 82 87.8
FvH4_7g04520 Fragaria vesca HOM05D003429 ORTHO05D003873 1.3e-31 139.4 83 86.7
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 1.7e-31 139.0 82 87.8
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 1.7e-31 139.0 85 85.9
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 1.7e-31 139.0 85 85.9
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 2.2e-31 138.7 82 87.8
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 2.2e-31 138.7 82 87.8
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 2.2e-31 138.7 82 85.4
Glyma.10G105100 Glycine max HOM05D003429 ORTHO05D003873 4.8e-31 137.5 82 82.9
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 6.3e-31 137.1 82 84.1
AUR62035521 Chenopodium quinoa HOM05D003429 ORTHO05D003873 8.2e-31 136.7 80 88.8
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 8.2e-31 136.7 85 83.5
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 8.2e-31 136.7 85 83.5
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 8.2e-31 136.7 85 83.5
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 8.2e-31 136.7 85 83.5
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 8.2e-31 136.7 85 83.5
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 8.2e-31 136.7 82 85.4
Psat6g086600 Pisum sativum HOM05D003429 ORTHO05D003873 1.1e-30 136.3 82 85.4
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 1.4e-30 136.0 82 82.9
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 1.4e-30 136.0 82 85.4
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 1.8e-30 135.6 82 85.4
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 1.8e-30 135.6 82 85.4
QL04p022427 Quercus lobata HOM05D003429 ORTHO05D003873 2.4e-30 135.2 79 87.3
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 3.1e-30 134.8 80 86.2
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 3.1e-30 134.8 80 86.2
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 3.1e-30 134.8 80 86.2
Cfa010982 Carpinus fangiana HOM05D003429 ORTHO05D003873 4.1e-30 134.4 79 87.3
Haze_02955 Corylus avellana HOM05D003429 ORTHO05D003873 4.1e-30 134.4 79 87.3
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 4.1e-30 134.4 82 81.7
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 5.3e-30 134.0 82 84.1
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 7.0e-30 133.7 81 84.0
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 7.0e-30 133.7 81 84.0
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 7.0e-30 133.7 81 84.0
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 7.0e-30 133.7 81 84.0
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 7.0e-30 133.7 80 85.0
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 9.1e-30 133.3 79 86.1
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 1.2e-29 132.9 81 82.7
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 1.2e-29 132.9 81 82.7
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 1.2e-29 132.9 81 82.7
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 1.6e-29 132.5 81 82.7
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 1.6e-29 132.5 81 82.7
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 2.0e-29 132.1 81 82.7
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 2.0e-29 132.1 82 80.5
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 2.0e-29 132.1 80 85.0
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 2.6e-29 131.7 78 85.9
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 2.6e-29 131.7 78 85.9
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 2.6e-29 131.7 78 85.9
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 5.9e-29 130.6 80 82.5
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 5.9e-29 130.6 81 81.5
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 5.9e-29 130.6 81 81.5
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 7.7e-29 130.2 81 81.5
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 7.7e-29 130.2 81 81.5
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 7.7e-29 130.2 81 81.5
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 1.0e-28 129.8 81 81.5
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 1.0e-28 129.8 81 81.5
Ca_15294_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.3e-28 129.4 77 85.7
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 1.3e-28 129.4 77 85.7
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 1.3e-28 129.4 77 85.7
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 1.3e-28 129.4 77 85.7
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 1.7e-28 129.0 77 85.7
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 2.2e-28 128.6 77 84.4
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 2.9e-28 128.3 77 84.4
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 3.8e-28 127.9 77 84.4
arahy.Tifrunner.gnm1.ann1.W9SEAP Arachis hypogaea HOM05D003429 ORTHO05D003873 6.5e-28 127.1 77 85.7
SHI11320 Sapria himalayana HOM05D003429 ORTHO05D003873 6.5e-28 127.1 85 77.6
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 8.5e-28 126.7 77 83.1
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 1.1e-27 126.3 85 75.3
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 1.9e-27 125.6 77 84.4
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 1.2e-26 122.9 82 76.8
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 1.2e-26 122.9 82 76.8
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 1.6e-26 122.5 82 75.6
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 1.0e-25 119.8 82 78.0
CBR_g30950 Chara braunii HOM05D003429 ORTHO05D003873 1.4e-25 119.4 82 74.4
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 4.4e-24 114.4 82 70.7
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 9.7e-24 113.2 81 71.6
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 3.7e-23 111.3 65 86.2
AUR62018433 Chenopodium quinoa HOM05D003429 ORTHO05D003873 6.3e-23 110.5 82 69.5
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 7.0e-22 107.1 67 82.1
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 7.0e-22 107.1 67 82.1
AUR62021000 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.0e-21 105.5 82 67.1
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 3.8e-20 101.3 63 81.0
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 7.2e-19 97.1 82 62.2
EL10Ac3g07336 Beta vulgaris HOM05D003429 ORTHO05D003873 1.5e-16 89.4 82 58.5
EL10Ac3g07341 Beta vulgaris HOM05D003429 ORTHO05D003873 1.5e-16 89.4 82 58.5
PRCOL_00000821 Prasinoderma coloniale HOM05D003429 ORTHO05D003873 7.5e-16 87.0 82 57.3
MCO13G155 Micromonas commoda HOM05D003429 ORTHO05D003873 3.7e-15 84.7 83 54.2
Lsat_1_v5_gn_2_32281 Lactuca sativa HOM05D003429 ORTHO05D003873 1.8e-14 82.4 61 75.4
Cre19.g751347 Chlamydomonas reinhardtii HOM05D003429 ORTHO05D003873 1.1e-11 73.2 82 46.3


User provided reference genes

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