Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002093g0210 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.0e-27 124.4 61 100.0
Solyc00g500148.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.2e-21 103.2 53 94.3
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 7.2e-21 103.2 54 92.6
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 1.2e-20 102.4 61 82.0
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-20 102.4 53 94.3
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-20 102.4 53 94.3
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-20 102.4 53 94.3
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-20 102.4 53 94.3
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-20 102.4 53 94.3
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-20 102.4 53 94.3
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.6e-20 100.9 54 90.7
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.6e-20 100.9 54 90.7
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.6e-20 100.9 54 90.7
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.6e-20 100.5 54 87.0
CAN.G413.6 Capsicum annuum HOM05D000445 ORTHO05D000314 1.0e-19 99.4 54 87.0
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 1.0e-19 99.4 54 88.9
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 1.0e-19 99.4 54 88.9
Eucgr.J02700 Eucalyptus grandis HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr13g0418951 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-19 98.6 54 88.9
Solyc09g031840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-19 98.6 53 92.5
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.0e-19 97.8 54 88.9
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.0e-19 97.8 54 88.9
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 3.9e-19 97.4 54 88.9
Sc25g0001980 Simmondsia chinensis HOM05D000445 ORTHO05D000314 3.9e-19 97.4 54 88.9
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 6.7e-19 96.7 54 87.0
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 6.7e-19 96.7 54 87.0
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 6.7e-19 96.7 54 87.0
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 6.7e-19 96.7 54 87.0
Lsat_1_v5_gn_0_15540 Lactuca sativa HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
Oeu012817.1 Olea europaea HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 85.2
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 8.7e-19 96.3 54 87.0
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 1.1e-18 95.9 54 88.9
Solyc04g050840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.1e-18 95.9 53 88.7
Nn020s41480 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.5e-18 95.5 54 87.0
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 1.9e-18 95.1 54 85.2
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 1.9e-18 95.1 54 85.2
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 2.5e-18 94.7 54 85.2
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 2.5e-18 94.7 54 87.0
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 2.5e-18 94.7 54 87.0
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.7e-18 93.6 54 87.0
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 5.7e-18 93.6 54 83.3
Oeu058356.1 Olea europaea HOM05D000445 ORTHO05D000314 5.7e-18 93.6 54 83.3
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 9.7e-18 92.8 52 86.5
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.3e-17 92.4 52 88.5
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-17 92.4 50 88.0
Solyc10g018980.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-17 92.4 52 86.5
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 2.2e-17 91.7 54 83.3
arahy.Tifrunner.gnm1.ann1.9A3TMW Arachis hypogaea HOM05D000445 ORTHO05D000314 2.8e-17 91.3 54 81.5
FAN18G1965 Fragaria x ananassa HOM05D000445 ORTHO05D000314 2.8e-17 91.3 54 81.5
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 6.3e-17 90.1 54 79.6
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 6.3e-17 90.1 54 79.6
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 6.3e-17 90.1 54 81.5
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 6.3e-17 90.1 51 88.2
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 1.4e-16 89.0 54 79.6
arahy.Tifrunner.gnm1.ann1.R6YYA0 Arachis hypogaea HOM05D000445 ORTHO05D000314 2.4e-16 88.2 54 79.6
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 5.3e-16 87.0 54 81.5
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 5.3e-16 87.0 54 81.5
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 5.3e-16 87.0 54 79.6
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 6.9e-16 86.7 54 79.6
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 1.2e-15 85.9 54 81.5
Migut.M00451 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.5e-15 85.5 54 81.5
HanXRQChr00c0448g0574801 Helianthus annuus HOM05D000445 ORTHO05D000314 2.0e-15 85.1 54 77.8
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.6e-15 84.7 54 79.6
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.6e-15 84.7 54 79.6
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 2.6e-15 84.7 54 79.6
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-15 84.7 62 77.4
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 3.4e-15 84.3 54 77.8
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 3.4e-15 84.3 54 77.8
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.4e-15 84.3 66 65.2
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.4e-15 84.3 66 65.2
Gohir.D02G149651 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.5e-15 84.0 52 80.8
TPR.G25940 Trifolium pratense HOM05D000445 ORTHO05D000314 5.9e-15 83.6 54 77.8
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
BolSC29t60491H Brassica oleracea HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
BraSC138t45546Z Brassica rapa HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
BraSC25t45893Z Brassica rapa HOM05D000445 ORTHO05D000314 7.7e-15 83.2 54 77.8
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 1.3e-14 82.4 54 77.8
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-14 82.0 54 79.6
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-14 82.0 54 79.6
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-14 82.0 54 79.6
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-14 82.0 54 79.6
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-14 82.0 54 79.6
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 2.9e-14 81.3 47 85.1
EL10Ac8g19269 Beta vulgaris HOM05D000445 ORTHO05D000314 3.8e-14 80.9 51 72.5
Ah.10g029020 Amaranthus hybridus HOM05D000445 ORTHO05D000314 8.5e-14 79.7 54 77.8
Solyc08g045620.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.4e-13 79.0 40 95.0
FAN08G3077 Fragaria x ananassa HOM05D000445 ORTHO05D000314 2.5e-13 78.2 43 88.4
Gohir.D10G110850 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.2e-13 77.8 51 74.5
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 4.2e-13 77.4 51 74.5
Gorai.005G167600 Gossypium raimondii HOM05D000445 ORTHO05D000314 7.2e-13 76.6 52 76.9
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund19326 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund26852 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.4e-13 76.3 55 78.2
Nitab4.5_0003101g0130 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.6e-12 74.3 40 90.0
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 1.0e-11 72.8 54 70.4
HanXRQChr00c0585g0576241 Helianthus annuus HOM05D000445 ORTHO05D000314 3.0e-11 71.2 39 89.7
Peaxi162Scf00134g01413 Petunia axillaris HOM05D011550 ORTHO05D015717 5.1e-11 70.5 37 91.9
CiPaw.03G000800 Carya illinoinensis HOM05D000445 ORTHO05D000314 6.7e-11 70.1 54 66.7
Oeu022561.1 Olea europaea HOM05D000445 ORTHO05D000314 3.3e-10 67.8 40 82.5
arahy.Tifrunner.gnm1.ann1.BS87Z8 Arachis hypogaea HOM05D000445 ORTHO05D000314 9.7e-10 66.2 46 73.9
Nitab4.5_0004573g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.7e-09 65.5 34 85.3
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 2.2e-09 65.1 54 64.8
Lsat_1_v5_gn_7_82600 Lactuca sativa HOM05D000445 ORTHO05D000314 4.8e-09 63.9 39 82.1
HanXRQChr11g0326541 Helianthus annuus HOM05D000445 ORTHO05D000314 6.3e-09 63.5 39 79.5
HanXRQChr00c0925g0577921 Helianthus annuus HOM05D000445 ORTHO05D000314 1.1e-08 62.8 53 60.4
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 1.4e-08 62.4 43 76.7
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 4.1e-08 60.8 54 61.1
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 5.3e-08 60.5 43 72.1
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 4.5e-07 57.4 33 84.8


User provided reference genes

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