Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 1.9e-115 419.1 198 100.0
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 1.5e-96 356.3 199 85.4
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 9.9e-96 353.6 171 94.7
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 2.9e-95 352.1 199 83.9
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 2.9e-95 352.1 199 83.9
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 1.5e-88 329.7 161 91.9
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 2.4e-86 322.4 163 91.4
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 2.8e-82 308.9 194 77.3
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 1.5e-80 303.1 192 74.0
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 2.6e-80 302.4 194 73.7
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 3.4e-80 302.0 194 72.7
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 2.2e-79 299.3 187 73.8
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 6.4e-79 297.7 193 72.0
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 8.4e-79 297.4 163 81.0
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 8.4e-79 297.4 194 70.1
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 1.4e-78 296.6 202 70.3
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 1.9e-78 296.2 189 71.4
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 1.9e-78 296.2 191 73.3
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 2.4e-78 295.8 196 70.9
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 2.4e-78 295.8 195 69.7
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 3.2e-78 295.4 187 74.3
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 5.4e-78 294.7 191 70.2
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 1.2e-77 293.5 163 78.5
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 1.6e-77 293.1 189 70.9
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 1.6e-77 293.1 183 74.3
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 2.1e-77 292.7 165 80.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.5e-77 292.0 182 74.7
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 4.6e-77 291.6 185 73.5
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 6.0e-77 291.2 216 66.2
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 6.0e-77 291.2 194 68.6
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 7.9e-77 290.8 163 78.5
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 1.0e-76 290.4 188 71.8
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 1.0e-76 290.4 176 75.6
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 1.0e-76 290.4 194 70.6
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 1.3e-76 290.0 190 72.6
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 1.3e-76 290.0 191 68.6
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 1.7e-76 289.7 194 70.1
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 2.3e-76 289.3 192 69.8
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 2.3e-76 289.3 203 70.0
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 6.6e-76 287.7 188 70.7
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 8.7e-76 287.3 195 69.2
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 8.7e-76 287.3 185 69.7
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 1.1e-75 287.0 194 69.6
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 1.5e-75 286.6 162 78.4
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 2.5e-75 285.8 196 69.4
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 3.3e-75 285.4 192 71.9
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 4.3e-75 285.0 200 68.5
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 4.3e-75 285.0 163 77.9
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 9.6e-75 283.9 180 72.8
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 2.1e-74 282.7 194 69.1
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 3.6e-74 282.0 193 68.9
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 3.6e-74 282.0 196 68.4
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 4.8e-74 281.6 190 71.6
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 4.8e-74 281.6 195 66.7
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 6.2e-74 281.2 194 68.6
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 8.1e-74 280.8 164 77.4
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 1.1e-73 280.4 181 71.8
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.8e-73 279.6 194 68.0
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 1.8e-73 279.6 185 72.4
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 2.4e-73 279.3 196 68.9
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 3.1e-73 278.9 183 68.9
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 5.3e-73 278.1 192 69.8
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.2e-72 276.9 193 68.4
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.2e-72 276.9 193 68.4
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.5e-72 276.6 200 68.0
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.7e-71 273.1 193 67.4
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 2.9e-71 272.3 194 68.0
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 6.4e-71 271.2 197 68.0
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 6.4e-71 271.2 193 69.4
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 6.4e-71 271.2 193 69.4
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.1e-70 270.4 163 74.2
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 1.1e-70 270.4 194 64.4
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 1.9e-70 269.6 162 77.2
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 3.2e-70 268.9 193 67.9
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 3.2e-70 268.9 163 76.1
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 5.5e-70 268.1 162 71.0
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 7.1e-70 267.7 192 68.2
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 7.1e-70 267.7 200 68.0
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 2.7e-69 265.8 192 66.7
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 2.7e-69 265.8 192 68.2
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 4.6e-69 265.0 193 68.4
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.0e-68 263.8 203 62.6
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 1.8e-68 263.1 189 65.6
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 3.9e-68 261.9 194 68.0
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 3.9e-68 261.9 193 66.3
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 3.9e-68 261.9 198 66.7
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 6.7e-68 261.2 193 64.2
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 8.7e-68 260.8 194 67.0
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 8.7e-68 260.8 193 66.3
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 1.1e-67 260.4 193 66.3
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 1.5e-67 260.0 193 65.8
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 1.5e-67 260.0 193 65.8
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 3.1e-65 252.3 160 71.2
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 6.9e-65 251.1 193 62.7
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 1.2e-64 250.4 139 79.9
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 1.2e-64 250.4 187 63.6
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 2.0e-64 249.6 234 56.0
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 2.9e-63 245.7 167 67.1
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 1.1e-62 243.8 201 60.2
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 5.5e-62 241.5 150 74.0
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 7.1e-62 241.1 159 71.7
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 9.3e-62 240.7 230 55.2
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 6.0e-61 238.0 164 65.2
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 3.0e-60 235.7 151 72.8
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 3.9e-60 235.3 145 75.2
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 4.3e-59 231.9 163 68.7
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 7.4e-59 231.1 277 45.8
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 2.8e-58 229.2 127 78.7
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.3e-52 210.3 197 51.3
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 1.1e-51 207.2 138 71.0
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 1.9e-51 206.5 168 59.5
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.6e-50 203.4 151 62.9
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 3.7e-50 202.2 129 73.6
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 6.3e-50 201.4 151 60.9
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.1e-49 200.7 150 60.7
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 1.8e-49 199.9 153 61.4
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 1.2e-45 187.2 134 65.7
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.0e-43 179.9 110 70.9
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 3.3e-43 179.1 105 73.3
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 2.2e-42 176.4 136 62.5
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 8.2e-42 174.5 114 70.2
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 1.8e-41 173.3 140 59.3
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 1.4e-38 163.7 97 74.2
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 5.5e-38 161.8 111 69.4
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 8.8e-36 154.5 143 54.5
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 1.7e-34 150.2 120 54.2
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 2.2e-34 149.8 91 73.6
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.8e-33 146.7 225 38.2
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 5.9e-32 141.7 131 50.4
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 6.5e-31 138.3 85 74.1
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 5.5e-30 135.2 95 63.2
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 1.1e-25 120.9 82 69.5
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 1.1e-22 110.9 107 52.3
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 4.0e-20 102.4 194 36.6
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 1.5e-19 100.5 197 36.0
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 1.8e-12 77.0 44 77.3


User provided reference genes

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