Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002089g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 6.5e-47 190.3 89 100.0
Nitab4.5_0000780g0130 Nicotiana tabacum HOM05D012456 ORTHO05D000022 1.4e-28 129.4 79 73.4
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 2.6e-27 125.2 79 72.2
Nitab4.5_0001115g0120 Nicotiana tabacum HOM05D012456 ORTHO05D000022 4.4e-27 124.4 79 72.2
Nitab4.5_0010074g0040 Nicotiana tabacum HOM05D009389 ORTHO05D012243 4.4e-27 124.4 80 70.0
Nitab4.5_0005955g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.7e-27 124.0 70 81.4
Nitab4.5_0002253g0030 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.1e-25 118.2 80 65.0
Nitab4.5_0000009g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.1e-25 117.9 84 64.3
Nitab4.5_0001519g0220 Nicotiana tabacum HOM05D009389 ORTHO05D004636 9.4e-22 106.7 80 61.2
Nitab4.5_0001919g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.6e-21 105.9 67 70.1
Nitab4.5_0000629g0070 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.5e-16 88.2 73 53.4
Nitab4.5_0010207g0010 Nicotiana tabacum HOM05D009389 ORTHO05D012243 4.5e-16 87.8 77 50.6
Nitab4.5_0007586g0060 Nicotiana tabacum HOM05D009389 ORTHO05D012243 1.3e-15 86.3 81 51.9
Nitab4.5_0013367g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 6.1e-13 77.4 78 50.0
Nitab4.5_0006004g0030 Nicotiana tabacum HOM05D012456 ORTHO05D012243 1.4e-12 76.3 45 73.3
Nitab4.5_0002091g0100 Nicotiana tabacum HOM05D009389 ORTHO05D012243 4.0e-12 74.7 70 50.0
Nitab4.5_0002499g0140 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.2e-11 73.2 54 59.3
Nitab4.5_0007618g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.4e-11 71.2 54 57.4
Nitab4.5_0000025g0460 Nicotiana tabacum HOM05D009389 ORTHO05D012243 2.4e-09 65.5 67 47.8
Nitab4.5_0001684g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.4e-09 65.5 80 36.2
Peaxi162Scf00000g56011 Petunia axillaris HOM05D008306 ORTHO05D004636 3.1e-09 65.1 76 42.1
Nitab4.5_0001175g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.4e-09 64.3 78 38.5
CAN.G681.24 Capsicum annuum HOM05D000016 ORTHO05D000109 9.2e-09 63.5 77 37.7
PGSC0003DMG400026063 Solanum tuberosum HOM05D009389 ORTHO05D004636 1.2e-08 63.2 80 35.0
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 2.0e-08 62.4 80 41.2
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.7e-08 62.0 74 40.5
Nitab4.5_0004461g0050 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.5e-08 61.6 53 49.1
Nitab4.5_0000593g0290 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.5e-08 61.2 68 44.1
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 2.3e-07 58.9 81 35.8
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-07 58.5 84 41.7
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.9e-07 58.2 77 35.1
Nitab4.5_0005185g0060 Nicotiana tabacum HOM05D012456 ORTHO05D004636 3.9e-07 58.2 60 48.3
PGSC0003DMG400029619 Solanum tuberosum HOM05D008381 ORTHO05D004636 6.6e-07 57.4 78 35.9
Nitab4.5_0004274g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 8.6e-07 57.0 71 36.6
Nitab4.5_0009909g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.5e-06 56.2 81 37.0
CAN.G79.41 Capsicum annuum HOM05D001795 ORTHO05D001741 2.5e-06 55.5 86 34.9
Nitab4.5_0000574g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.5e-06 55.5 63 42.9
Nitab4.5_0002346g0070 Nicotiana tabacum HOM05D011052 ORTHO05D004636 2.5e-06 55.5 80 36.2
Nitab4.5_0016171g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.5e-06 55.5 74 39.2
Nitab4.5_0002028g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.3e-06 55.1 77 35.1
Nitab4.5_0004734g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.3e-06 55.1 80 36.2
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 55.1 82 31.7
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.3e-06 54.7 80 31.2
Nitab4.5_0001032g0100 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.3e-06 54.7 59 44.1
Nitab4.5_0009177g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.3e-06 54.7 76 35.5
Nitab4.5_0013383g0010 Nicotiana tabacum HOM05D012456 ORTHO05D004636 4.3e-06 54.7 64 42.2
Nitab4.5_0000685g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.6e-06 54.3 57 42.1
Nitab4.5_0002269g0040 Nicotiana tabacum HOM05D008381 ORTHO05D004636 5.6e-06 54.3 78 37.2
Peaxi162Scf00287g00196 Petunia axillaris HOM05D005774 ORTHO05D006516 5.6e-06 54.3 50 50.0
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 5.6e-06 54.3 80 38.8
Nitab4.5_0002968g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 7.3e-06 53.9 76 35.5
Nitab4.5_0007709g0040 Nicotiana tabacum HOM05D009389 ORTHO05D012243 7.3e-06 53.9 57 43.9
QL10p048631 Quercus lobata HOM05D027877 ORTHO05D000022 9.5e-06 53.5 77 33.8


User provided reference genes

Program Settings