Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.2e-88 328.9 164 100.0
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.2e-35 151.4 115 70.4
Nitab4.5_0009159g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.5e-33 146.7 121 66.9
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.8e-33 144.8 84 83.3
Nitab4.5_0002698g0150 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.8e-33 144.1 114 64.9
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.2e-32 142.9 104 75.0
Nitab4.5_0000760g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-29 133.3 80 82.5
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.6e-25 119.4 173 38.7
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.4e-23 111.7 173 36.4
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-21 107.1 162 35.8
Nitab4.5_0010978g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.6e-20 101.7 80 71.2
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-18 97.4 103 45.6
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-18 96.7 161 35.4
Nitab4.5_0004037g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.6e-17 92.8 87 52.9
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.9e-17 90.9 130 40.8
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.9e-17 90.9 144 37.5
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.8e-16 89.0 147 37.4
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 6.4e-16 88.2 101 39.6
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-15 86.7 131 38.2
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-14 83.2 129 37.2
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.8e-14 81.3 140 32.9
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-13 80.5 143 35.7
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-12 77.4 140 31.4
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.5e-12 77.0 80 41.2
Nitab4.5_0000115g0320 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-11 73.9 48 77.1
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.6e-11 73.6 134 36.6
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-11 73.2 120 37.5
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 1.1e-10 70.9 91 39.6
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-10 70.5 77 42.9
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.8e-10 70.1 134 30.6
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.2e-10 68.6 124 37.1
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-09 65.5 79 40.5
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 1.3e-08 63.9 74 40.5
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 2.2e-08 63.2 159 29.6
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 2.9e-08 62.8 174 24.7
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.8e-08 62.4 72 41.7
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.4e-08 61.2 107 31.8
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-07 60.8 141 32.6
TAR369G0511 Trochodendron aralioides HOM05D067606 ORTHO05D051489 1.1e-07 60.8 154 29.2
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-07 60.1 64 43.8
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 4.2e-07 58.9 155 25.2
AUR62008577 Chenopodium quinoa HOM05D000344 ORTHO05D005296 5.4e-07 58.5 166 27.1
PSO832G2737 Papaver somniferum HOM05D007919 ORTHO05D006738 5.4e-07 58.5 168 27.4
PGSC0003DMG400014334 Solanum tuberosum HOM05D007931 ORTHO05D010331 7.1e-07 58.2 72 43.1
TAR648G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000004 9.3e-07 57.8 170 28.2
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-06 57.4 181 29.8
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.1e-06 56.6 75 33.3
Rhsim01G0194100 Rhododendron simsii HOM05D018264 ORTHO05D018096 2.7e-06 56.2 169 24.9
BolC8t50384H Brassica oleracea HOM05D000003 ORTHO05D001091 4.6e-06 55.5 156 25.0
CANSAT35G1274 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-06 55.5 139 27.3
TAR627G0075 Trochodendron aralioides HOM05D000033 ORTHO05D001614 4.6e-06 55.5 107 35.5
Aa31LG8G11190 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.0e-06 55.1 148 25.7
BcaC03g13498 Brassica carinata HOM05D001239 ORTHO05D000925 6.0e-06 55.1 146 25.3
BolC3t19763H Brassica oleracea HOM05D001239 ORTHO05D000925 6.0e-06 55.1 156 21.2
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.0e-06 55.1 154 28.6
vmacro12951 Vaccinium macrocarpon HOM05D002252 ORTHO05D002451 6.0e-06 55.1 164 25.0
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 7.8e-06 54.7 146 24.7
TAR369G0893 Trochodendron aralioides HOM05D024081 ORTHO05D026209 7.8e-06 54.7 157 26.8


User provided reference genes

Program Settings