Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002081g0110 Nicotiana tabacum HOM05D000200 ORTHO05D011844 2.2e-91 339.3 224 100.0
Nitab4.5_0001044g0160 Nicotiana tabacum HOM05D000200 ORTHO05D000262 7.1e-34 148.3 118 78.0
Peaxi162Scf01530g00045 Petunia axillaris HOM05D000200 ORTHO05D000262 1.6e-33 147.1 118 73.7
Cc01_g18570 Coffea canephora HOM05D000200 ORTHO05D000262 2.1e-25 120.2 118 64.4
CAN.G771.21 Capsicum annuum HOM05D000200 ORTHO05D000262 6.7e-24 115.2 118 61.9
Oeu028667.2 Olea europaea HOM05D000200 ORTHO05D000262 8.7e-24 114.8 117 62.4
Ah.02g111750 Amaranthus hybridus HOM05D000200 ORTHO05D008045 4.3e-23 112.5 210 37.6
AUR62024746 Chenopodium quinoa HOM05D000200 ORTHO05D000262 1.3e-22 110.9 229 38.0
Solyc06g083960.3 Solanum lycopersicum HOM05D000200 ORTHO05D000262 5.3e-21 105.5 96 65.6
Migut.D00402 Erythranthe guttata HOM05D000200 ORTHO05D000262 6.9e-21 105.1 118 57.6
Sopen06g035340 Solanum pennellii HOM05D000200 ORTHO05D000262 6.9e-21 105.1 96 65.6
AUR62004888 Chenopodium quinoa HOM05D000200 ORTHO05D000262 1.2e-20 104.4 247 34.8
AUR62011905 Chenopodium quinoa HOM05D000200 ORTHO05D000262 1.7e-19 100.5 118 54.2
PGR119G0535 Punica granatum HOM05D000200 ORTHO05D000262 2.9e-19 99.8 253 35.6
ECA236G1597 Erigeron canadensis HOM05D000200 ORTHO05D000262 5.0e-19 99.0 119 57.1
PGSC0003DMG400010897 Solanum tuberosum HOM05D000200 ORTHO05D000262 5.0e-19 99.0 176 40.3
DCAR_012528 Daucus carota HOM05D000200 ORTHO05D000262 8.5e-19 98.2 118 54.2
SGA_v2.0_scaffold1G00583 Striga asiatica HOM05D000200 ORTHO05D000262 3.2e-18 96.3 117 53.8
Nitab4.5_0000326g0030 Nicotiana tabacum HOM05D000200 ORTHO05D000262 4.6e-17 92.4 102 61.8
BraA06t23774Z Brassica rapa HOM05D000200 ORTHO05D000262 1.0e-16 91.3 176 36.9
CSS0011235 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D000262 1.0e-16 91.3 97 60.8
Hund09584 Selenicereus undatus HOM05D000200 ORTHO05D000262 2.3e-16 90.1 119 53.8
Atru.chr5.1629 Acer truncatum HOM05D000200 ORTHO05D000262 6.7e-16 88.6 113 54.0
Ah.11g049840 Amaranthus hybridus HOM05D000200 ORTHO05D000262 1.5e-15 87.4 131 47.3
Lalb_Chr11g0074401 Lupinus albus HOM05D000200 ORTHO05D011844 3.3e-15 86.3 176 34.1
ATR0051G032 Amborella trichopoda HOM05D000200 ORTHO05D000262 5.7e-15 85.5 118 49.2
CSS0040070 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D000262 9.7e-15 84.7 119 52.1
Ah.06g191990 Amaranthus hybridus HOM05D000200 ORTHO05D000262 1.6e-14 84.0 163 37.4
unitig_37.g12442 Utricularia gibba HOM05D000200 ORTHO05D000262 2.2e-14 83.6 246 31.7
CDE02G2151 Ceratophyllum demersum HOM05D000200 ORTHO05D000262 4.8e-14 82.4 118 49.2
Lsat_1_v5_gn_8_91480 Lactuca sativa HOM05D000200 ORTHO05D000262 6.3e-14 82.0 120 50.8
ClCG02G016920 Citrullus lanatus HOM05D000200 ORTHO05D000262 1.4e-13 80.9 169 35.5
CSS0026793 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D011844 1.8e-13 80.5 253 29.2
Ca_10031_v3 Cicer arietinum L. HOM05D000200 ORTHO05D000262 3.1e-13 79.7 117 47.0
CDE06G1021 Ceratophyllum demersum HOM05D000200 ORTHO05D000262 4.1e-13 79.3 117 48.7
EL10Ac7g16386 Beta vulgaris HOM05D000200 ORTHO05D000262 6.9e-13 78.6 177 34.5
HanXRQChr04g0113721 Helianthus annuus HOM05D000200 ORTHO05D000262 6.9e-13 78.6 120 49.2
vmacro10347 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 4.5e-12 75.9 168 38.1
TPR.G26635 Trifolium pratense HOM05D000200 ORTHO05D000262 2.2e-11 73.6 119 46.2
Medtr1g080600 Medicago truncatula HOM05D000200 ORTHO05D000262 2.9e-11 73.2 117 45.3
AT1G17580 Arabidopsis thaliana HOM05D000200 ORTHO05D000262 3.8e-11 72.8 118 42.4
Migut.N02193 Erythranthe guttata HOM05D000200 ORTHO05D000262 5.0e-11 72.4 118 44.9
CSS0003216 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D000262 6.5e-11 72.0 96 52.1
Sp1g07380 Schrenkiella parvula HOM05D000200 ORTHO05D000262 1.1e-10 71.2 190 32.1
CDE07G0875 Ceratophyllum demersum HOM05D000200 ORTHO05D000262 2.5e-10 70.1 188 32.4
ECA233G0752 Erigeron canadensis HOM05D000200 ORTHO05D000262 2.5e-10 70.1 182 32.4
MD10G1188400 Malus domestica HOM05D000200 ORTHO05D000262 3.2e-10 69.7 229 34.5
Sed0003379 Sechium edule HOM05D000200 ORTHO05D000262 7.2e-10 68.6 234 28.2
AL1G29890 Arabidopsis lyrata HOM05D000200 ORTHO05D000262 9.4e-10 68.2 118 41.5
Rhsim09G0138800 Rhododendron simsii HOM05D000200 ORTHO05D000262 9.4e-10 68.2 102 47.1
Cpa.g.sc50.51 Carica papaya HOM05D000200 ORTHO05D011844 1.2e-09 67.8 113 45.1
MD05G1201700 Malus domestica HOM05D000200 ORTHO05D000262 1.2e-09 67.8 250 29.6
C08p43800 Brassica napus HOM05D000200 ORTHO05D000262 1.6e-09 67.4 118 40.7
DCAR_023875 Daucus carota HOM05D000200 ORTHO05D000262 1.6e-09 67.4 215 30.7
PGR102G1109 Punica granatum HOM05D000200 ORTHO05D000262 1.6e-09 67.4 107 43.0
Sabra01G0156200 Salix brachista HOM05D000200 ORTHO05D000262 1.6e-09 67.4 118 39.8
Sabra02G0033500 Salix brachista HOM05D000200 ORTHO05D000262 2.1e-09 67.0 118 44.9
Carub.0001s1734 Capsella rubella HOM05D000200 ORTHO05D000262 2.7e-09 66.6 118 40.7
Psat7g148360 Pisum sativum HOM05D000200 ORTHO05D011844 2.7e-09 66.6 119 44.5
Potri.002G041800 Populus trichocarpa HOM05D000200 ORTHO05D000262 3.6e-09 66.2 118 44.1
Rhsim13G0032100 Rhododendron simsii HOM05D000200 ORTHO05D000262 3.6e-09 66.2 118 46.6
vmacro22475 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 3.6e-09 66.2 244 28.3
Ciclev10024066m.g Citrus clementina HOM05D000200 ORTHO05D000262 7.9e-09 65.1 276 29.3
Eucgr.B01521 Eucalyptus grandis HOM05D000200 ORTHO05D000262 7.9e-09 65.1 118 41.5
unitig_749.g14232 Utricularia gibba HOM05D000200 ORTHO05D000262 7.9e-09 65.1 109 40.4
Oeu033254.1 Olea europaea HOM05D000200 ORTHO05D000262 1.0e-08 64.7 174 31.0
Ciclev10024696m.g Citrus clementina HOM05D000200 ORTHO05D000262 2.3e-08 63.5 118 40.7
Sc17g0000810 Simmondsia chinensis HOM05D000200 ORTHO05D000262 3.0e-08 63.2 65 58.5
THA.LOC104811004 Tarenaya hassleriana HOM05D000200 ORTHO05D000262 3.0e-08 63.2 118 39.8
AUR62001065 Chenopodium quinoa HOM05D000200 ORTHO05D000262 5.1e-08 62.4 93 47.3
Lj9C618T10 Lonicera japonica HOM05D000200 ORTHO05D000262 5.1e-08 62.4 118 40.7
Dinv43955 Davidia involucrata HOM05D000200 ORTHO05D000262 6.7e-08 62.0 223 27.8
Thhalv10006551m.g Eutrema salsugineum HOM05D000200 ORTHO05D000262 8.8e-08 61.6 118 39.0
DCAR_024720 Daucus carota HOM05D000200 ORTHO05D000262 1.1e-07 61.2 118 38.1
arahy.Tifrunner.gnm1.ann1.0HPU4J Arachis hypogaea HOM05D000200 ORTHO05D011844 1.5e-07 60.8 59 52.5
FAN09G0255 Fragaria x ananassa HOM05D000200 ORTHO05D000262 2.0e-07 60.5 151 31.8
AT3G58160 Arabidopsis thaliana HOM05D000200 ORTHO05D000262 2.6e-07 60.1 74 56.8
EL10Ac5g10429 Beta vulgaris HOM05D000200 ORTHO05D000262 2.6e-07 60.1 66 53.0
Carub.0005s2501 Capsella rubella HOM05D000200 ORTHO05D000262 2.6e-07 60.1 74 56.8
ClCG03G015310 Citrullus lanatus HOM05D000200 ORTHO05D000262 2.6e-07 60.1 235 28.1
AL5G39850 Arabidopsis lyrata HOM05D000200 ORTHO05D000262 3.3e-07 59.7 74 56.8
EL10Ac4g09047 Beta vulgaris HOM05D000200 ORTHO05D000262 3.3e-07 59.7 118 39.8
Thecc.06G117000 Theobroma cacao HOM05D000200 ORTHO05D000262 3.3e-07 59.7 118 39.0
Actinidia24805 Actinidia chinensis HOM05D000200 ORTHO05D000262 4.4e-07 59.3 111 40.5
BcaB02g07546 Brassica carinata HOM05D000200 ORTHO05D000262 4.4e-07 59.3 74 56.8
BcaC08g44902 Brassica carinata HOM05D000200 ORTHO05D000262 4.4e-07 59.3 74 58.1
A07p23950 Brassica napus HOM05D000200 ORTHO05D000262 4.4e-07 59.3 74 58.1
C06p25220 Brassica napus HOM05D000200 ORTHO05D000262 4.4e-07 59.3 74 58.1
BolC6t37681H Brassica oleracea HOM05D000200 ORTHO05D000262 4.4e-07 59.3 74 58.1
BraA07t30046Z Brassica rapa HOM05D000200 ORTHO05D000262 4.4e-07 59.3 74 58.1
Cpa.g.sc25.91 Carica papaya HOM05D000200 ORTHO05D000262 4.4e-07 59.3 108 39.8
MBI05_g42005_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D000262 4.4e-07 59.3 108 44.4
RcHm_v2.0_Chr6g0245731 Rosa chinensis HOM05D000200 ORTHO05D011844 4.4e-07 59.3 59 52.5
ClCG09G003590 Citrullus lanatus HOM05D000200 ORTHO05D000262 5.7e-07 58.9 118 39.8
Sed0015792 Sechium edule HOM05D000200 ORTHO05D000262 5.7e-07 58.9 118 39.0
ECA248G1400 Erigeron canadensis HOM05D000200 ORTHO05D000262 7.4e-07 58.5 112 42.0
SGA_v2.0_scaffold98G29337 Striga asiatica HOM05D000200 ORTHO05D000262 7.4e-07 58.5 110 42.7
CsaV3_7G031590 Cucumis sativus L. HOM05D000200 ORTHO05D000262 9.7e-07 58.2 121 38.0
Zm00001eb160490 Zea mays HOM05D000200 ORTHO05D000262 9.7e-07 58.2 106 40.6
AL1G19170 Arabidopsis lyrata HOM05D000200 ORTHO05D000262 1.3e-06 57.8 87 42.5
A05p12270 Brassica napus HOM05D000200 ORTHO05D000262 1.3e-06 57.8 61 49.2
MELO3C023495.2 Cucumis melo HOM05D000200 ORTHO05D000262 1.3e-06 57.8 121 38.0
Nitab4.5_0005417g0050 Nicotiana tabacum HOM05D000200 ORTHO05D000262 1.7e-06 57.4 94 46.8
THA.LOC104802247 Tarenaya hassleriana HOM05D000200 ORTHO05D000262 1.7e-06 57.4 87 52.9
TAR406G0003 Trochodendron aralioides HOM05D000200 ORTHO05D011844 1.7e-06 57.4 66 48.5
C05p06820 Brassica napus HOM05D000200 ORTHO05D000262 2.2e-06 57.0 136 34.6
BraA05t20168Z Brassica rapa HOM05D000200 ORTHO05D000262 2.2e-06 57.0 61 49.2
Manes.01G199400 Manihot esculenta HOM05D000200 ORTHO05D000262 2.2e-06 57.0 125 39.2
Cfa010683 Carpinus fangiana HOM05D000200 ORTHO05D000262 2.8e-06 56.6 118 38.1
Thhalv10006411m.g Eutrema salsugineum HOM05D000200 ORTHO05D000262 2.8e-06 56.6 74 54.1
QL09p037649 Quercus lobata HOM05D000200 ORTHO05D000262 2.8e-06 56.6 81 50.6
Sp5g04560 Schrenkiella parvula HOM05D000200 ORTHO05D000262 2.8e-06 56.6 74 55.4
MSTRG.9012 Avicennia marina HOM05D000200 ORTHO05D000262 3.7e-06 56.2 98 39.8
BcaC02g11412 Brassica carinata HOM05D000200 ORTHO05D000262 3.7e-06 56.2 61 49.2
C04p15850 Brassica napus HOM05D000200 ORTHO05D000262 3.7e-06 56.2 62 48.4
BolC4t23154H Brassica oleracea HOM05D000200 ORTHO05D000262 3.7e-06 56.2 62 48.4
Hma1.2p1_0345F.1_g131260 Hydrangea macrophylla HOM05D000200 ORTHO05D000262 3.7e-06 56.2 41 75.6
MBI04_g10913_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D000262 3.7e-06 56.2 96 45.8
Potri.001G199200 Populus trichocarpa HOM05D000200 ORTHO05D000262 3.7e-06 56.2 106 38.7
CiPaw.03G210800 Carya illinoinensis HOM05D000200 ORTHO05D000262 4.8e-06 55.8 107 39.3
Sc24g0004170 Simmondsia chinensis HOM05D000200 ORTHO05D000262 4.8e-06 55.8 69 52.2
Aa31sc20G90 Aethionema arabicum HOM05D000200 ORTHO05D000262 6.3e-06 55.5 87 43.7
BraA04t15996Z Brassica rapa HOM05D000200 ORTHO05D000262 6.3e-06 55.5 59 61.0
TWI63G1756 Tripterygium wilfordii HOM05D000200 ORTHO05D000262 6.3e-06 55.5 103 40.8
HPP92_023552 Vanilla planifolia HOM05D000200 ORTHO05D011844 6.3e-06 55.5 107 41.1
GSVIVG01036267001 Vitis vinifera HOM05D000200 ORTHO05D000262 6.3e-06 55.5 41 73.2
Prupe.8G228100 Prunus persica HOM05D000200 ORTHO05D000262 8.2e-06 55.1 66 57.6


User provided reference genes

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