Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002078g0010 Nicotiana tabacum HOM05D004771 ORTHO05D005565 3.1e-95 352.1 212 100.0
Nitab4.5_0000575g0030 Nicotiana tabacum HOM05D004771 ORTHO05D005565 4.3e-73 278.5 191 87.4
Peaxi162Scf00170g00041 Petunia axillaris HOM05D004771 ORTHO05D005565 4.2e-60 235.3 201 72.6
CAN.G490.38 Capsicum annuum HOM05D004771 ORTHO05D005565 2.4e-55 219.5 198 64.1
CAN.G630.7 Capsicum annuum HOM05D004771 ORTHO05D005565 1.3e-53 213.8 191 67.5
Sopen04g019850 Solanum pennellii HOM05D004771 ORTHO05D005565 2.2e-53 213.0 203 70.9
PGSC0003DMG400028994 Solanum tuberosum HOM05D004771 ORTHO05D005565 6.5e-53 211.5 195 63.6
PGSC0003DMG400005017 Solanum tuberosum HOM05D004771 ORTHO05D005565 1.2e-51 207.2 191 74.9
Solyc04g049660.3 Solanum lycopersicum HOM05D004771 ORTHO05D005565 2.7e-51 206.1 204 70.1
CSS0030116 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 1.0e-34 151.0 137 61.3
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 5.2e-34 148.7 138 60.1
Duzib132G0558 Durio zibethinus HOM05D004771 ORTHO05D005565 1.1e-33 147.5 202 54.5
Dinv44219 Davidia involucrata HOM05D000703 ORTHO05D000633 1.5e-33 147.1 137 60.6
DCAR_027620 Daucus carota HOM05D004771 ORTHO05D005565 3.3e-33 146.0 134 60.4
Lj8P345T14 Lonicera japonica HOM05D004771 ORTHO05D005565 3.3e-33 146.0 140 57.9
CiPaw.05G182000 Carya illinoinensis HOM05D004771 ORTHO05D005565 4.4e-33 145.6 136 61.0
COL.COLO4_17806 Corchorus olitorius HOM05D004771 ORTHO05D005565 7.5e-33 144.8 139 59.7
Dinv22681 Davidia involucrata HOM05D004771 ORTHO05D005565 9.7e-33 144.4 119 65.5
CSS0010443 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 1.3e-32 144.1 137 60.6
Lj8C288T1 Lonicera japonica HOM05D004771 ORTHO05D005565 2.2e-32 143.3 137 55.5
Cpa.g.c27001.4 Carica papaya HOM05D004771 ORTHO05D005565 4.8e-32 142.1 204 53.9
Migut.M00048 Erythranthe guttata HOM05D004771 ORTHO05D005565 6.3e-32 141.7 205 47.8
Thecc.02G032500 Theobroma cacao HOM05D004771 ORTHO05D005565 1.1e-31 141.0 200 54.5
Atru.chr4.2044 Acer truncatum HOM05D004771 ORTHO05D005565 1.8e-31 140.2 196 55.1
Actinidia33010 Actinidia chinensis HOM05D004771 ORTHO05D005565 2.4e-31 139.8 137 59.1
Cfa004725 Carpinus fangiana HOM05D004771 ORTHO05D005565 5.3e-31 138.7 136 60.3
QL11p028495 Quercus lobata HOM05D004771 ORTHO05D005565 5.3e-31 138.7 136 58.8
Cc02_g28780 Coffea canephora HOM05D004771 ORTHO05D005565 9.1e-31 137.9 152 53.9
arahy.Tifrunner.gnm1.ann1.DYSV1F Arachis hypogaea HOM05D004771 ORTHO05D005565 2.0e-30 136.7 208 47.6
Ciclev10029295m.g Citrus clementina HOM05D004771 ORTHO05D005565 2.0e-30 136.7 191 52.9
Ciclev10029331m.g Citrus clementina HOM05D004771 ORTHO05D005565 2.0e-30 136.7 191 50.8
Haze_10334 Corylus avellana HOM05D004771 ORTHO05D005565 2.0e-30 136.7 143 57.3
Gohir.D01G171700 Gossypium hirsutum HOM05D004771 ORTHO05D005565 3.5e-30 136.0 197 53.3
Gorai.002G213200 Gossypium raimondii HOM05D004771 ORTHO05D005565 3.5e-30 136.0 197 53.3
PGR142G3141 Punica granatum HOM05D004771 ORTHO05D005565 4.5e-30 135.6 139 51.8
COL.COLO4_26627 Corchorus olitorius HOM05D004771 ORTHO05D005565 5.9e-30 135.2 133 57.9
QL09p037751 Quercus lobata HOM05D004771 ORTHO05D005565 5.9e-30 135.2 142 57.0
TAR628G1069 Trochodendron aralioides HOM05D004771 ORTHO05D005565 1.3e-29 134.0 132 59.1
GSVIVG01022390001 Vitis vinifera HOM05D004771 ORTHO05D005565 1.3e-29 134.0 137 58.4
GSVIVG01037017001 Vitis vinifera HOM05D004771 ORTHO05D005565 2.2e-29 133.3 191 48.7
arahy.Tifrunner.gnm1.ann1.8327BB Arachis hypogaea HOM05D004771 ORTHO05D005565 2.9e-29 132.9 194 49.5
TWI23G0030 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 2.9e-29 132.9 133 58.6
MSTRG.6635 Avicennia marina HOM05D004771 ORTHO05D005565 3.8e-29 132.5 142 52.1
Sed0002941 Sechium edule HOM05D004771 ORTHO05D005565 1.1e-28 131.0 136 55.1
EL10Ac7g16361 Beta vulgaris HOM05D004771 ORTHO05D005565 1.5e-28 130.6 137 51.8
Sc12g0010390 Simmondsia chinensis HOM05D004771 ORTHO05D005565 1.5e-28 130.6 120 57.5
RhsimUnG0159200 Rhododendron simsii HOM05D004771 ORTHO05D005565 1.9e-28 130.2 137 58.4
Prupe.8G152600 Prunus persica HOM05D004771 ORTHO05D005565 2.5e-28 129.8 135 59.3
Potri.015G035700 Populus trichocarpa HOM05D004771 ORTHO05D005565 5.5e-28 128.6 139 53.2
TPR.G12006 Trifolium pratense HOM05D004771 ORTHO05D005565 1.2e-27 127.5 140 51.4
Haze_04594 Corylus avellana HOM05D000399 ORTHO05D000304 2.1e-27 126.7 164 50.0
Glyma.20G137100 Glycine max HOM05D004771 ORTHO05D005565 2.1e-27 126.7 138 54.3
THA.LOC104816989 Tarenaya hassleriana HOM05D004771 ORTHO05D005565 2.1e-27 126.7 142 51.4
CANSAT25G0049 Cannabis sativa HOM05D004771 ORTHO05D005565 3.6e-27 125.9 135 53.3
Gohir.A01G180600 Gossypium hirsutum HOM05D004771 ORTHO05D005565 3.6e-27 125.9 129 56.6
Lalb_Chr02g0144821 Lupinus albus HOM05D004771 ORTHO05D005565 3.6e-27 125.9 141 51.1
TPR.G31901 Trifolium pratense HOM05D004771 ORTHO05D005565 4.7e-27 125.6 133 51.9
AUR62038158 Chenopodium quinoa HOM05D004771 ORTHO05D005565 8.0e-27 124.8 140 50.0
Medtr1g009780 Medicago truncatula HOM05D004771 ORTHO05D005565 8.0e-27 124.8 130 57.7
Hund20829 Selenicereus undatus HOM05D004771 ORTHO05D005565 8.0e-27 124.8 132 52.3
AUR62009845 Chenopodium quinoa HOM05D004771 ORTHO05D005565 1.0e-26 124.4 140 51.4
Phvul.007G048400 Phaseolus vulgaris HOM05D004771 ORTHO05D005565 1.0e-26 124.4 141 53.9
TAR625G0649 Trochodendron aralioides HOM05D004771 ORTHO05D005565 2.3e-26 123.2 132 56.8
CANSAT25G2974 Cannabis sativa HOM05D004771 ORTHO05D005565 3.0e-26 122.9 135 52.6
Manes.10G087700 Manihot esculenta HOM05D004771 ORTHO05D005565 3.0e-26 122.9 129 51.9
Nn4g25002 Nelumbo nucifera HOM05D004771 ORTHO05D005565 5.2e-26 122.1 138 52.9
DCAR_007735 Daucus carota HOM05D004771 ORTHO05D005565 6.8e-26 121.7 133 54.9
Eucgr.I02508 Eucalyptus grandis HOM05D004771 ORTHO05D005565 6.8e-26 121.7 140 51.4
TWI14G0977 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 8.8e-26 121.3 124 57.3
Aqoxy5G00826 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 1.2e-25 120.9 133 57.1
FvH4_2g02960 Fragaria vesca HOM05D004771 ORTHO05D005565 1.2e-25 120.9 136 50.0
PSO170G1452 Papaver somniferum HOM05D004771 ORTHO05D005565 1.2e-25 120.9 134 56.7
RcHm_v2.0_Chr6g0247751 Rosa chinensis HOM05D004771 ORTHO05D005565 1.2e-25 120.9 132 50.8
ClCG10G002170 Citrullus lanatus HOM05D004771 ORTHO05D005565 1.5e-25 120.6 136 52.2
FAN24G0749 Fragaria x ananassa HOM05D004771 ORTHO05D005565 1.5e-25 120.6 134 50.7
PSO017G4159 Papaver somniferum HOM05D004771 ORTHO05D005565 1.5e-25 120.6 132 57.6
Psat6g007560 Pisum sativum HOM05D004771 ORTHO05D005565 2.0e-25 120.2 129 53.5
Eucgr.C02425 Eucalyptus grandis HOM05D004771 ORTHO05D005565 2.6e-25 119.8 136 50.7
MD10G1112800 Malus domestica HOM05D004771 ORTHO05D005565 2.6e-25 119.8 136 52.9
CANSAT56G2106 Cannabis sativa HOM05D004771 ORTHO05D005565 3.4e-25 119.4 132 56.1
MELO3C013897.2 Cucumis melo HOM05D004771 ORTHO05D005565 3.4e-25 119.4 136 50.0
Aqoxy3G04244 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 4.4e-25 119.0 133 56.4
unitig_899.g15063 Utricularia gibba HOM05D004771 ORTHO05D005565 7.5e-25 118.2 130 53.8
Aqoxy3G02687 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 1.7e-24 117.1 131 57.3
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 1.7e-24 117.1 95 65.3
Aa31LG2G7800 Aethionema arabicum HOM05D004771 ORTHO05D005565 2.2e-24 116.7 139 49.6
Lj5g0002463 Lotus japonicus HOM05D004771 ORTHO05D005565 2.2e-24 116.7 136 50.0
PSO170G1616 Papaver somniferum HOM05D004771 ORTHO05D005565 2.2e-24 116.7 139 51.1
Aqoxy3G02689_Aqoxy3G02690 Aquilegia oxysepala HOM05D001377 ORTHO05D005565 3.7e-24 115.9 130 56.2
ECA248G2169 Erigeron canadensis HOM05D004771 ORTHO05D005565 8.3e-24 114.8 140 50.0
HanXRQChr05g0160091 Helianthus annuus HOM05D004771 ORTHO05D005565 8.3e-24 114.8 200 45.0
Ca_12871_v3 Cicer arietinum L. HOM05D004771 ORTHO05D005565 1.1e-23 114.4 118 54.2
CsaV3_3G002260 Cucumis sativus L. HOM05D004771 ORTHO05D005565 1.4e-23 114.0 140 48.6
PSO528G0234 Papaver somniferum HOM05D004771 ORTHO05D005565 1.4e-23 114.0 139 49.6
Lj6g0021608 Lotus japonicus HOM05D004771 ORTHO05D005565 1.8e-23 113.6 137 51.1
MBI13_g09224_MAGBIO Magnolia biondii HOM05D004771 ORTHO05D005565 1.8e-23 113.6 142 46.5
ATR0736G167 Amborella trichopoda HOM05D004771 ORTHO05D005565 3.1e-23 112.8 129 51.2
VMungo0720G1115 Vigna mungo HOM05D004771 ORTHO05D005565 5.4e-23 112.1 121 56.2
SGA_v2.0_scaffold181G39690 Striga asiatica HOM05D004771 ORTHO05D005565 1.6e-22 110.5 119 53.8
Nn2g15843 Nelumbo nucifera HOM05D004771 ORTHO05D005565 2.7e-22 109.8 137 50.4
AL2G31090 Arabidopsis lyrata HOM05D004771 ORTHO05D005565 3.5e-22 109.4 139 49.6
CDE05G2657 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 3.5e-22 109.4 138 44.9
Medtr3g080910 Medicago truncatula HOM05D004771 ORTHO05D005565 4.5e-22 109.0 83 66.3
Thhalv10019781m.g Eutrema salsugineum HOM05D004771 ORTHO05D005565 5.9e-22 108.6 129 49.6
MD05G1109000 Malus domestica HOM05D004771 ORTHO05D005565 5.9e-22 108.6 144 47.2
Rhsim09G0033000 Rhododendron simsii HOM05D004771 ORTHO05D005565 5.9e-22 108.6 129 52.7
AT1G71430 Arabidopsis thaliana HOM05D004771 ORTHO05D005565 1.0e-21 107.8 138 50.0
Nitab4.5_0001458g0040 Nicotiana tabacum HOM05D004771 ORTHO05D005565 2.9e-21 106.3 56 96.4
CDE02G0226 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 5.0e-21 105.5 124 49.2
vmacro05477 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 6.5e-21 105.1 89 67.4
arahy.Tifrunner.gnm1.ann1.ATP5C9 Arachis hypogaea HOM05D004771 ORTHO05D005565 7.2e-20 101.7 83 63.9
Carub.0002s1828 Capsella rubella HOM05D004771 ORTHO05D005565 1.6e-19 100.5 141 46.8
SEGI_32093 Sequoiadendron giganteum HOM05D004771 ORTHO05D005565 4.7e-19 99.0 148 43.2
Zm00001eb002910 Zea mays HOM05D004771 ORTHO05D005565 8.0e-19 98.2 138 44.2
Zm00001eb003040 Zea mays HOM05D004771 ORTHO05D005565 8.0e-19 98.2 138 44.2
CARHR291250 Cardamine hirsuta HOM05D004771 ORTHO05D005565 1.8e-18 97.1 86 62.8
SalBow7G1175 Salvia bowleyana HOM05D004771 ORTHO05D005565 1.8e-18 97.1 155 41.3
Zm00001eb159770 Zea mays HOM05D004771 ORTHO05D005565 2.3e-18 96.7 137 43.8
A02p17330 Brassica napus HOM05D004771 ORTHO05D005565 5.2e-18 95.5 81 65.4
BraA02t06780Z Brassica rapa HOM05D004771 ORTHO05D005565 5.2e-18 95.5 81 65.4
BraA07t31335Z Brassica rapa HOM05D004771 ORTHO05D005565 5.2e-18 95.5 125 48.0
Os01g0617800 Oryza sativa ssp. japonica HOM05D004771 ORTHO05D005565 6.8e-18 95.1 125 44.8
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 6.8e-18 95.1 131 42.7
A07p37720 Brassica napus HOM05D004771 ORTHO05D005565 2.0e-17 93.6 81 63.0
C06p45590 Brassica napus HOM05D004771 ORTHO05D005565 2.6e-17 93.2 81 63.0
BolC6t39610H Brassica oleracea HOM05D004771 ORTHO05D005565 2.6e-17 93.2 81 63.0
Sp5g26590 Schrenkiella parvula HOM05D004771 ORTHO05D005565 2.6e-17 93.2 86 59.3
AUR62017723 Chenopodium quinoa HOM05D004771 ORTHO05D005565 3.4e-17 92.8 72 63.9
BcaB05g24668 Brassica carinata HOM05D004771 ORTHO05D005565 4.4e-17 92.4 81 63.0
BcaC02g09527 Brassica carinata HOM05D004771 ORTHO05D005565 5.7e-17 92.0 126 46.0
C04p43760 Brassica napus HOM05D004771 ORTHO05D005565 5.7e-17 92.0 126 46.0
BolC4t25958H Brassica oleracea HOM05D004771 ORTHO05D005565 5.7e-17 92.0 126 46.0
BcaC03g15291 Brassica carinata HOM05D004771 ORTHO05D005565 7.5e-17 91.7 81 61.7
C02p28980 Brassica napus HOM05D004771 ORTHO05D005565 7.5e-17 91.7 81 61.7
BolC2t08948H Brassica oleracea HOM05D004771 ORTHO05D005565 7.5e-17 91.7 81 61.7
Sed0006388 Sechium edule HOM05D004771 ORTHO05D005565 1.7e-16 90.5 81 60.5
Manes.07G051000 Manihot esculenta HOM05D004771 ORTHO05D005565 2.2e-16 90.1 73 63.0
HanXRQChr11g0345411 Helianthus annuus HOM05D004771 ORTHO05D005565 3.1e-15 86.3 188 37.8
vmacro00584 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 4.1e-15 85.9 59 78.0
Oeu012349.1 Olea europaea HOM05D004771 ORTHO05D005565 7.0e-15 85.1 59 71.2
Gohir.D01G171500 Gossypium hirsutum HOM05D004771 ORTHO05D005565 2.3e-13 80.1 63 66.7
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 3.3e-12 76.3 54 70.4
Mapoly0060s0029 Marchantia polymorpha HOM05D004771 ORTHO05D005565 3.3e-12 76.3 132 40.9
arahy.Tifrunner.gnm1.ann1.S1TJ9S Arachis hypogaea HOM05D004771 ORTHO05D005565 1.6e-11 73.9 72 55.6
arahy.Tifrunner.gnm1.ann1.P0FJQ9 Arachis hypogaea HOM05D004771 ORTHO05D005565 2.8e-11 73.2 59 62.7
Glyma.10G254400 Glycine max HOM05D004771 ORTHO05D005565 8.0e-11 71.6 120 43.3
arahy.Tifrunner.gnm1.ann1.MQV2C0 Arachis hypogaea HOM05D004771 ORTHO05D005565 1.0e-10 71.2 119 54.6
Pp3c4_10090 Physcomitrium patens HOM05D004771 ORTHO05D005565 1.4e-10 70.9 134 35.8
Rhsim02G0173400 Rhododendron simsii HOM05D004771 ORTHO05D005565 1.5e-09 67.4 55 65.5
CARHR045930 Cardamine hirsuta HOM05D004771 ORTHO05D005565 2.2e-08 63.5 85 47.1
SMO244G0085 Selaginella moellendorffii HOM05D004771 ORTHO05D005565 4.6e-06 55.8 98 39.8


User provided reference genes

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