Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.6e-58 228.0 114 100.0
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.5e-43 179.5 135 72.6
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 4.3e-43 177.9 145 68.3
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 4.3e-43 177.9 145 68.3
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 7.3e-43 177.2 91 98.9
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 1.2e-42 176.4 145 67.6
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 5.4e-38 161.0 142 62.0
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 9.2e-38 160.2 142 62.7
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.6e-37 159.5 144 61.1
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 3.0e-36 155.2 142 59.9
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.9e-36 154.8 152 59.2
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 1.5e-35 152.9 142 61.3
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.5e-35 152.9 128 67.2
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 4.3e-35 151.4 142 58.5
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.4e-33 146.4 81 91.4
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 3.1e-33 145.2 142 58.5
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.1e-33 145.2 143 60.8
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.2e-32 143.3 143 60.1
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.2e-32 143.3 143 58.7
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 1.5e-32 142.9 142 59.2
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 2.6e-32 142.1 143 58.7
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 5.8e-32 141.0 178 48.3
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 7.6e-32 140.6 141 58.9
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.3e-31 139.8 143 57.3
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.7e-31 139.4 144 59.7
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 2.2e-31 139.0 144 59.0
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.1e-30 136.7 142 58.5
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 2.7e-29 132.1 144 57.6
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 6.0e-29 131.0 144 56.2
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.0e-28 130.2 133 57.1
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.0e-28 130.2 144 56.9
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 1.7e-28 129.4 81 84.0
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 2.3e-28 129.0 143 56.6
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 5.1e-28 127.9 143 58.7
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 6.6e-28 127.5 142 54.9
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 6.6e-28 127.5 144 56.2
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 8.6e-28 127.1 143 55.9
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 8.6e-28 127.1 143 55.9
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.1e-27 126.7 143 55.2
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.9e-27 125.9 146 56.8
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 2.5e-27 125.6 146 53.4
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 4.3e-27 124.8 146 54.8
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 4.3e-27 124.8 143 55.9
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 5.6e-27 124.4 142 53.5
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.6e-27 124.4 81 82.7
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.6e-27 124.4 81 82.7
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 5.6e-27 124.4 145 53.1
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 7.3e-27 124.0 70 88.6
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 7.3e-27 124.0 146 57.5
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 7.3e-27 124.0 144 55.6
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.2e-26 123.2 142 52.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.2e-26 123.2 145 54.5
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.2e-26 123.2 145 54.5
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 1.6e-26 122.9 145 54.5
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 2.1e-26 122.5 145 54.5
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.1e-26 122.5 145 54.5
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.8e-26 122.1 144 54.2
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 2.8e-26 122.1 144 54.2
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 3.6e-26 121.7 144 54.2
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 3.6e-26 121.7 144 54.2
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 3.6e-26 121.7 143 53.8
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 3.6e-26 121.7 142 53.5
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 6.2e-26 120.9 145 53.8
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 8.1e-26 120.6 144 54.2
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 8.1e-26 120.6 145 53.8
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 8.1e-26 120.6 81 81.5
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.1e-25 120.2 146 52.7
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 1.4e-25 119.8 143 53.1
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.4e-25 119.8 144 54.2
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.4e-25 119.8 144 52.8
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.4e-25 119.8 144 54.2
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.8e-25 119.4 132 56.1
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 1.8e-25 119.4 143 52.4
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 2.4e-25 119.0 144 52.8
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 3.1e-25 118.6 144 54.9
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 4.0e-25 118.2 157 50.3
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 6.9e-25 117.5 133 54.9
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 1.2e-24 116.7 145 53.8
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.5e-24 116.3 144 52.1
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 1.5e-24 116.3 143 53.1
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.0e-24 115.9 145 53.8
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.0e-24 115.9 144 52.8
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.4e-24 115.2 145 52.4
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.4e-24 114.8 145 52.4
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 4.4e-24 114.8 145 51.7
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 5.8e-24 114.4 143 52.4
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 5.8e-24 114.4 144 51.4
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.6e-24 114.0 167 45.5
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 9.9e-24 113.6 145 51.7
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 9.9e-24 113.6 132 53.8
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 9.9e-24 113.6 145 51.7
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 1.3e-23 113.2 144 54.9
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.3e-23 113.2 145 51.7
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.3e-23 113.2 145 51.7
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.7e-23 112.8 134 54.5
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.7e-23 112.8 131 54.2
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 1.7e-23 112.8 146 51.4
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 2.2e-23 112.5 144 50.0
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 2.9e-23 112.1 145 51.0
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 2.9e-23 112.1 145 49.7
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 3.8e-23 111.7 145 51.7
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 3.8e-23 111.7 145 51.0
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 3.8e-23 111.7 149 47.7
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 4.9e-23 111.3 145 51.0
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 4.9e-23 111.3 146 50.7
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 6.4e-23 110.9 145 49.7
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 6.4e-23 110.9 145 50.3
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 8.4e-23 110.5 145 49.7
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 8.4e-23 110.5 145 51.0
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 1.4e-22 109.8 134 53.0
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 1.4e-22 109.8 144 50.7
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 1.9e-22 109.4 145 49.7
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 2.4e-22 109.0 145 49.7
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.2e-22 108.6 145 49.7
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 3.2e-22 108.6 143 50.3
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 5.4e-22 107.8 145 49.7
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 5.4e-22 107.8 145 49.7
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 5.4e-22 107.8 145 49.7
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 5.4e-22 107.8 145 49.7
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 5.4e-22 107.8 145 49.7
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 9.3e-22 107.1 145 49.7
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.6e-21 106.3 143 50.3
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.6e-21 106.3 143 50.3
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.6e-21 106.3 143 47.6
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.6e-21 106.3 143 51.7
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 2.7e-21 105.5 143 49.7
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 2.7e-21 105.5 127 54.3
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 2.7e-21 105.5 143 49.7
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 7.8e-21 104.0 145 49.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 7.8e-21 104.0 143 51.0
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.3e-20 103.2 145 49.0
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 2.3e-20 102.4 143 49.7
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 2.3e-20 102.4 143 49.7
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 2.3e-20 102.4 143 49.7
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.0e-20 102.1 147 50.3
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 3.9e-20 101.7 205 40.0
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.6e-20 100.9 146 49.3
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 6.6e-20 100.9 70 78.6
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 8.7e-20 100.5 147 49.7
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.1e-19 100.1 145 49.0
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 1.1e-19 100.1 142 49.3
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.5e-19 99.8 151 46.4
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 5.6e-19 97.8 81 69.1
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 7.3e-19 97.4 148 46.6
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 2.8e-18 95.5 82 69.5
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.1e-17 93.6 134 46.3
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 1.4e-17 93.2 143 46.9
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 2.4e-17 92.4 129 46.5
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 3.1e-17 92.0 112 54.5
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.1e-17 92.0 131 48.1
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 5.3e-17 91.3 146 45.9
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 9.0e-17 90.5 143 45.5
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 9.0e-17 90.5 83 69.9
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.6e-16 89.0 111 55.9
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.6e-16 89.0 150 44.7
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 1.3e-15 86.7 82 65.9
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 2.2e-15 85.9 82 65.9
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.8e-15 85.1 142 45.8
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 4.2e-14 81.6 134 42.5
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 4.2e-14 81.6 144 41.0
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 7.1e-14 80.9 131 43.5
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 7.1e-14 80.9 131 45.0
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.3e-12 75.9 95 46.3
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 8.7e-12 73.9 89 49.4
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 3.3e-11 72.0 72 62.5
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 4.3e-11 71.6 153 41.2
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 2.1e-10 69.3 66 63.6
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.1e-09 67.0 142 39.4
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 5.3e-09 64.7 80 56.2
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 5.3e-09 64.7 80 56.2
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 1.2e-08 63.5 59 67.8
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 2.9e-07 58.9 73 56.2
Rhsim07G0167200 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.1e-06 54.3 27 88.9


User provided reference genes

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