Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002076g0030 Nicotiana tabacum HOM05D001767 ORTHO05D001714 3.1e-57 225.3 153 100.0
Oeu034631.1 Olea europaea HOM05D001767 ORTHO05D001714 6.0e-16 88.2 117 46.2
Dinv16774 Davidia involucrata HOM05D001767 ORTHO05D001714 1.0e-15 87.4 116 54.3
MSTRG.14735 Avicennia marina HOM05D001767 ORTHO05D001714 3.0e-15 85.9 117 43.6
Potri.004G057500 Populus trichocarpa HOM05D001767 ORTHO05D001714 3.9e-15 85.5 122 51.6
CiPaw.09G070100 Carya illinoinensis HOM05D001767 ORTHO05D001714 5.1e-15 85.1 121 44.6
CSS0012076 Camellia sinensis var. sinensis HOM05D001767 ORTHO05D001714 6.6e-15 84.7 117 42.7
Cfa000611 Carpinus fangiana HOM05D001767 ORTHO05D001714 6.6e-15 84.7 119 57.1
Migut.H01435 Erythranthe guttata HOM05D001767 ORTHO05D001714 8.6e-15 84.3 116 43.1
SalBow7G3903 Salvia bowleyana HOM05D001767 ORTHO05D001714 8.6e-15 84.3 120 56.7
Oeu041767.1 Olea europaea HOM05D001767 ORTHO05D001714 1.5e-14 83.6 117 42.7
RcHm_v2.0_Chr5g0010861 Rosa chinensis HOM05D001767 ORTHO05D001714 1.9e-14 83.2 117 47.0
Sabra04G0037200 Salix brachista HOM05D001767 ORTHO05D001714 1.9e-14 83.2 122 51.6
FAN21G0775 Fragaria x ananassa HOM05D001767 ORTHO05D001714 2.5e-14 82.8 117 57.3
Rhsim13G0189800 Rhododendron simsii HOM05D001767 ORTHO05D001714 2.5e-14 82.8 115 55.7
PGSC0003DMG400004388 Solanum tuberosum HOM05D001767 ORTHO05D001714 2.5e-14 82.8 107 69.2
Ciclev10016924m.g Citrus clementina HOM05D001767 ORTHO05D001714 3.3e-14 82.4 117 63.2
Haze_06227 Corylus avellana HOM05D001767 ORTHO05D001714 3.3e-14 82.4 115 59.1
QL05p047295 Quercus lobata HOM05D001767 ORTHO05D001714 3.3e-14 82.4 116 64.7
MSTRG.13223 Avicennia marina HOM05D001767 ORTHO05D001714 4.3e-14 82.0 117 42.7
CsaV3_1G033300 Cucumis sativus L. HOM05D001767 ORTHO05D001714 4.3e-14 82.0 115 61.7
Gohir.D10G037500 Gossypium hirsutum HOM05D001767 ORTHO05D001714 4.3e-14 82.0 132 42.4
Nitab4.5_0012052g0010 Nicotiana tabacum HOM05D001767 ORTHO05D001714 4.3e-14 82.0 121 53.7
Gohir.A10G036900 Gossypium hirsutum HOM05D001767 ORTHO05D001714 5.6e-14 81.6 119 43.7
Gorai.011G039500 Gossypium raimondii HOM05D001767 ORTHO05D001714 5.6e-14 81.6 132 42.4
MD05G1300400 Malus domestica HOM05D001767 ORTHO05D001714 5.6e-14 81.6 108 46.3
Prupe.4G061900 Prunus persica HOM05D001767 ORTHO05D001714 5.6e-14 81.6 103 64.1
Eucgr.D00486 Eucalyptus grandis HOM05D001767 ORTHO05D001714 7.3e-14 81.3 116 44.0
TAR624G0193 Trochodendron aralioides HOM05D001767 ORTHO05D001714 7.3e-14 81.3 120 42.5
Dinv40680 Davidia involucrata HOM05D001767 ORTHO05D001714 9.5e-14 80.9 115 55.7
Nn1g09120 Nelumbo nucifera HOM05D001767 ORTHO05D001714 9.5e-14 80.9 110 55.5
Oeu043110.1 Olea europaea HOM05D001767 ORTHO05D001714 9.5e-14 80.9 115 46.1
Potri.011G066500 Populus trichocarpa HOM05D001767 ORTHO05D001714 1.2e-13 80.5 123 40.7
Duzib160G0244 Durio zibethinus HOM05D001767 ORTHO05D001714 1.6e-13 80.1 139 52.5
Glyma.05G158500 Glycine max HOM05D001767 ORTHO05D001714 1.6e-13 80.1 106 63.2
Manes.16G040300 Manihot esculenta HOM05D001767 ORTHO05D001714 1.6e-13 80.1 124 54.0
Oeu043109.1 Olea europaea HOM05D001767 ORTHO05D001714 1.6e-13 80.1 115 46.1
SalBow8G3465 Salvia bowleyana HOM05D001767 ORTHO05D001714 1.6e-13 80.1 107 43.0
TAR626G0913 Trochodendron aralioides HOM05D001767 ORTHO05D001714 1.6e-13 80.1 120 42.5
FvH4_3g07740 Fragaria vesca HOM05D001767 ORTHO05D001714 2.1e-13 79.7 117 57.3
FAN11G1865 Fragaria x ananassa HOM05D001767 ORTHO05D001714 2.1e-13 79.7 117 57.3
FAN16G1800 Fragaria x ananassa HOM05D001767 ORTHO05D001714 2.1e-13 79.7 117 57.3
FAN25G1376 Fragaria x ananassa HOM05D001767 ORTHO05D001714 2.1e-13 79.7 117 57.3
Solyc03g006160.1 Solanum lycopersicum HOM05D001767 ORTHO05D001714 2.8e-13 79.3 91 61.5
MSTRG.7411 Avicennia marina HOM05D001767 ORTHO05D001714 3.6e-13 79.0 117 41.9
MD10G1279500 Malus domestica HOM05D001767 ORTHO05D001714 3.6e-13 79.0 104 62.5
Lj1P1192T21 Lonicera japonica HOM05D001767 ORTHO05D001714 4.7e-13 78.6 107 59.8
Manes.17G056100 Manihot esculenta HOM05D001767 ORTHO05D001714 4.7e-13 78.6 123 55.3
Nn1g04422 Nelumbo nucifera HOM05D001767 ORTHO05D001714 6.2e-13 78.2 110 58.2
Duzib192G0143 Durio zibethinus HOM05D001767 ORTHO05D001714 8.1e-13 77.8 142 52.8
Sabra11G0048100 Salix brachista HOM05D001767 ORTHO05D001714 8.1e-13 77.8 123 39.8
Solyc02g076800.1 Solanum lycopersicum HOM05D001767 ORTHO05D001714 1.1e-12 77.4 137 62.8
PGR042G0320 Punica granatum HOM05D001767 ORTHO05D001714 1.4e-12 77.0 104 42.3
Atru.chr10.1660 Acer truncatum HOM05D001767 ORTHO05D001714 1.8e-12 76.6 121 57.9
Atru.chr10.1661 Acer truncatum HOM05D001767 ORTHO05D001714 1.8e-12 76.6 121 57.9
Gohir.D06G137200 Gossypium hirsutum HOM05D001767 ORTHO05D001714 2.3e-12 76.3 151 49.7
Gorai.010G159400 Gossypium raimondii HOM05D001767 ORTHO05D001714 2.3e-12 76.3 151 49.7
Lsat_1_v5_gn_4_49061 Lactuca sativa HOM05D001767 ORTHO05D001714 2.3e-12 76.3 111 41.4
PGR031G1155 Punica granatum HOM05D001767 ORTHO05D001714 2.3e-12 76.3 120 42.5
TAR452G0002 Trochodendron aralioides HOM05D001767 ORTHO05D001714 2.3e-12 76.3 104 44.2
ClCG03G007660 Citrullus lanatus HOM05D001767 ORTHO05D001714 3.1e-12 75.9 115 60.9
Gohir.A06G131100 Gossypium hirsutum HOM05D001767 ORTHO05D001714 3.1e-12 75.9 147 53.1
Oeu039918.1 Olea europaea HOM05D001767 ORTHO05D001714 3.1e-12 75.9 129 44.2
CARHR028500 Cardamine hirsuta HOM05D001767 ORTHO05D001714 5.2e-12 75.1 112 40.2
Thecc.06G170200 Theobroma cacao HOM05D001767 ORTHO05D001714 5.2e-12 75.1 153 53.6
MELO3C002655.2 Cucumis melo HOM05D001767 ORTHO05D001714 6.8e-12 74.7 104 67.3
Glyma.15G083000 Glycine max HOM05D001767 ORTHO05D001714 6.8e-12 74.7 117 64.1
Glyma.08G116200 Glycine max HOM05D001767 ORTHO05D001714 8.9e-12 74.3 94 80.9
VMungo0251G0081 Vigna mungo HOM05D001767 ORTHO05D001714 8.9e-12 74.3 94 79.8
DCAR_005215 Daucus carota HOM05D001767 ORTHO05D001714 1.2e-11 73.9 133 37.6
Sopen02g021700 Solanum pennellii HOM05D001767 ORTHO05D001714 1.2e-11 73.9 141 53.2
Migut.M01036 Erythranthe guttata HOM05D001767 ORTHO05D001714 1.5e-11 73.6 121 65.3
Hma1.2p1_0333F.1_g128060 Hydrangea macrophylla HOM05D001767 ORTHO05D001714 1.5e-11 73.6 126 42.1
THA.LOC104814258 Tarenaya hassleriana HOM05D001767 ORTHO05D001714 1.5e-11 73.6 131 38.2
BcaC06g35409 Brassica carinata HOM05D001767 ORTHO05D001714 2.6e-11 72.8 115 39.1
BolC7t42149H Brassica oleracea HOM05D001767 ORTHO05D001714 2.6e-11 72.8 115 39.1
Phvul.002G238700 Phaseolus vulgaris HOM05D001767 ORTHO05D001714 2.6e-11 72.8 116 65.5
Phvul.006G175900 Phaseolus vulgaris HOM05D001767 ORTHO05D001714 2.6e-11 72.8 122 47.5
Sc17g0005730 Simmondsia chinensis HOM05D001767 ORTHO05D001714 2.6e-11 72.8 110 41.8
VMungo0540G2071 Vigna mungo HOM05D001767 ORTHO05D001714 2.6e-11 72.8 115 58.3
Cpa.g.sc7.73 Carica papaya HOM05D001767 ORTHO05D001714 3.4e-11 72.4 107 72.9
HanXRQChr17g0565091 Helianthus annuus HOM05D001767 ORTHO05D001714 3.4e-11 72.4 111 40.5
Aqoxy1G02057 Aquilegia oxysepala HOM05D001767 ORTHO05D001714 5.8e-11 71.6 119 40.3
BcaB03g12144 Brassica carinata HOM05D001767 ORTHO05D001714 5.8e-11 71.6 108 38.0
TWI63G1557 Tripterygium wilfordii HOM05D001767 ORTHO05D001714 5.8e-11 71.6 122 40.2
C07p16500 Brassica napus HOM05D001767 ORTHO05D001714 7.6e-11 71.2 115 38.3
HanXRQChr16g0518651 Helianthus annuus HOM05D001767 ORTHO05D001714 9.9e-11 70.9 111 55.9
Sed0005326 Sechium edule HOM05D001767 ORTHO05D001714 9.9e-11 70.9 148 51.4
ClCG01G023750 Citrullus lanatus HOM05D001767 ORTHO05D000636 1.3e-10 70.5 113 44.2
CsaV3_6G050920 Cucumis sativus L. HOM05D001767 ORTHO05D001714 1.3e-10 70.5 113 63.7
Carub.0001s2738 Capsella rubella HOM05D001767 ORTHO05D001714 1.7e-10 70.1 118 36.4
COL.COLO4_31289 Corchorus olitorius HOM05D001767 ORTHO05D001714 1.7e-10 70.1 162 46.9
Medtr2g016150 Medicago truncatula HOM05D001767 ORTHO05D001714 2.2e-10 69.7 122 65.6
Lj6g0023027 Lotus japonicus HOM05D001767 ORTHO05D001714 2.9e-10 69.3 121 66.1
Psat1g197920 Pisum sativum HOM05D001767 ORTHO05D001714 2.9e-10 69.3 134 54.5
BcaB03g13898 Brassica carinata HOM05D001767 ORTHO05D001714 4.9e-10 68.6 116 38.8
A07p10900 Brassica napus HOM05D001767 ORTHO05D001714 4.9e-10 68.6 115 38.3
BraA07t28879Z Brassica rapa HOM05D001767 ORTHO05D001714 4.9e-10 68.6 115 38.3
A08p25260 Brassica napus HOM05D001767 ORTHO05D001714 6.4e-10 68.2 114 36.0
C03p75580 Brassica napus HOM05D001767 ORTHO05D001714 6.4e-10 68.2 114 35.1
BraA08t34478Z Brassica rapa HOM05D001767 ORTHO05D001714 6.4e-10 68.2 114 36.0
Duzib235G0814 Durio zibethinus HOM05D001767 ORTHO05D001714 6.4e-10 68.2 141 48.9
CiPaw.10G059300 Carya illinoinensis HOM05D001767 ORTHO05D001714 8.4e-10 67.8 118 44.9
TPR.G11647 Trifolium pratense HOM05D001767 ORTHO05D001714 8.4e-10 67.8 119 55.5
AT1G29195 Arabidopsis thaliana HOM05D001767 ORTHO05D001714 1.1e-09 67.4 128 34.4
Lalb_Chr12g0205111 Lupinus albus HOM05D001767 ORTHO05D001714 1.1e-09 67.4 96 76.0
MBI06_g08592_MAGBIO Magnolia biondii HOM05D001767 ORTHO05D001714 1.1e-09 67.4 103 50.5
Aqoxy4G00332 Aquilegia oxysepala HOM05D001767 ORTHO05D001714 1.4e-09 67.0 110 38.2
Ca_00438_v3 Cicer arietinum L. HOM05D001767 ORTHO05D001714 1.9e-09 66.6 123 61.0
Glyma.13G229500 Glycine max HOM05D001767 ORTHO05D001714 1.9e-09 66.6 120 58.3
Nitab4.5_0003711g0050 Nicotiana tabacum HOM05D001767 ORTHO05D001714 1.9e-09 66.6 77 83.1
TWI38G1823 Tripterygium wilfordii HOM05D001767 ORTHO05D001714 1.9e-09 66.6 118 51.7
DCAR_007944 Daucus carota HOM05D001767 ORTHO05D001714 2.4e-09 66.2 111 50.5
CDE10G0843 Ceratophyllum demersum HOM05D001767 ORTHO05D001714 4.1e-09 65.5 120 49.2
Thhalv10008836m.g Eutrema salsugineum HOM05D001767 ORTHO05D001714 5.4e-09 65.1 110 40.0
Sp1g25110 Schrenkiella parvula HOM05D001767 ORTHO05D001714 5.4e-09 65.1 129 34.9
Aa31LG6G6340 Aethionema arabicum HOM05D001767 ORTHO05D001714 7.1e-09 64.7 139 33.8
AL1G42910 Arabidopsis lyrata HOM05D001767 ORTHO05D001714 7.1e-09 64.7 128 34.4
CDE10G1318 Ceratophyllum demersum HOM05D001767 ORTHO05D001714 1.2e-08 63.9 102 52.0
BcaC01g00081 Brassica carinata HOM05D001767 ORTHO05D001714 1.6e-08 63.5 114 52.6
BolC3t19815H Brassica oleracea HOM05D001767 ORTHO05D001714 1.6e-08 63.5 114 52.6
arahy.Tifrunner.gnm1.ann1.2VSR2R Arachis hypogaea HOM05D001767 ORTHO05D001714 2.7e-08 62.8 138 55.1
SGA_v2.0_scaffold16G07685 Striga asiatica HOM05D001767 ORTHO05D001714 3.5e-08 62.4 89 43.8
arahy.Tifrunner.gnm1.ann1.GZFQ7P Arachis hypogaea HOM05D001767 ORTHO05D001714 4.6e-08 62.0 119 59.7
ECA234G1876 Erigeron canadensis HOM05D001767 ORTHO05D001714 6.0e-08 61.6 124 46.8
Cc02_g15030 Coffea canephora HOM05D001767 ORTHO05D001714 1.0e-07 60.8 94 72.3
ATR0602G268 Amborella trichopoda HOM05D001767 ORTHO05D001714 1.3e-07 60.5 98 35.7
Lj4g0014967 Lotus japonicus HOM05D001767 ORTHO05D001714 2.3e-07 59.7 90 61.1
PSO229G0155 Papaver somniferum HOM05D001767 ORTHO05D001714 5.1e-07 58.5 120 37.5
PSO675G6814 Papaver somniferum HOM05D001767 ORTHO05D001714 5.1e-07 58.5 120 37.5
Peaxi162Scf01979g00003 Petunia axillaris HOM05D001767 ORTHO05D001714 5.1e-07 58.5 46 69.6
Lalb_Chr18g0054561 Lupinus albus HOM05D001767 ORTHO05D001714 8.6e-07 57.8 91 70.3
Os01g0758500 Oryza sativa ssp. japonica HOM05D001767 ORTHO05D001714 1.1e-06 57.4 118 49.2
Sed0022533 Sechium edule HOM05D001767 ORTHO05D001714 1.1e-06 57.4 119 43.7
Lalb_Chr15g0086111 Lupinus albus HOM05D001767 ORTHO05D001714 1.5e-06 57.0 101 49.5
Lj2P301T47 Lonicera japonica HOM05D001767 ORTHO05D001714 2.5e-06 56.2 111 63.1
DCAR_004004 Daucus carota HOM05D001767 ORTHO05D001714 3.3e-06 55.8 112 35.7
SalBow7G0592 Salvia bowleyana HOM05D001767 ORTHO05D001714 5.6e-06 55.1 45 64.4
Lalb_Chr20g0117471 Lupinus albus HOM05D001767 ORTHO05D001714 9.6e-06 54.3 91 59.3


User provided reference genes

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