Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002072g0130 Nicotiana tabacum HOM05D000435 ORTHO05D013824 1.2e-35 152.5 74 100.0
CAN.G1109.6 Capsicum annuum HOM05D000435 ORTHO05D016180 7.4e-12 73.6 41 82.9
CAN.G85.21 Capsicum annuum HOM05D000435 ORTHO05D016180 7.4e-12 73.6 41 82.9
Nitab4.5_0002312g0050 Nicotiana tabacum HOM05D000435 ORTHO05D013824 7.4e-12 73.6 44 77.3
CAN.G1485.3 Capsicum annuum HOM05D000435 ORTHO05D013824 2.8e-11 71.6 40 82.5
CAN.G72.11 Capsicum annuum HOM05D000435 ORTHO05D013824 2.8e-11 71.6 36 91.7
CAN.G78.6 Capsicum annuum HOM05D000435 ORTHO05D013824 2.8e-11 71.6 40 82.5
Nitab4.5_0001152g0690 Nicotiana tabacum HOM05D000435 ORTHO05D013824 4.8e-11 70.9 40 82.5
Nitab4.5_0000085g0100 Nicotiana tabacum HOM05D000435 ORTHO05D013824 8.1e-11 70.1 40 77.5
Nitab4.5_0001152g0100 Nicotiana tabacum HOM05D000435 ORTHO05D016180 1.1e-10 69.7 40 82.5
CAN.G623.32 Capsicum annuum HOM05D000435 ORTHO05D000430 3.1e-10 68.2 40 77.5
Nitab4.5_0001152g0130 Nicotiana tabacum HOM05D000435 ORTHO05D013824 3.1e-10 68.2 40 80.0
CAN.G1.3 Capsicum annuum HOM05D000435 ORTHO05D016180 6.9e-10 67.0 40 77.5
Nitab4.5_0008535g0030 Nicotiana tabacum HOM05D000435 ORTHO05D013824 1.2e-09 66.2 40 77.5
Peaxi162Scf00139g01031 Petunia axillaris HOM05D000435 ORTHO05D000430 1.2e-09 66.2 40 72.5
CAN.G1.23 Capsicum annuum HOM05D000435 ORTHO05D016180 1.5e-09 65.9 39 74.4
Nitab4.5_0010643g0020 Nicotiana tabacum HOM05D000435 ORTHO05D000430 2.6e-09 65.1 40 75.0
Dinv10357 Davidia involucrata HOM05D000435 ORTHO05D000430 3.4e-09 64.7 40 77.5
Solyc07g065770.3 Solanum lycopersicum HOM05D000435 ORTHO05D013824 3.4e-09 64.7 40 75.0
Nitab4.5_0000152g0410 Nicotiana tabacum HOM05D000435 ORTHO05D000430 5.8e-09 63.9 40 72.5
Nitab4.5_0000172g0070 Nicotiana tabacum HOM05D000435 ORTHO05D016180 1.7e-08 62.4 54 53.7
Glyma.14G012000 Glycine max HOM05D000435 ORTHO05D000430 1.1e-07 59.7 40 62.5
Nitab4.5_0000172g2200 Nicotiana tabacum HOM05D000435 ORTHO05D013824 1.1e-07 59.7 38 73.7
Prupe.6G027000 Prunus persica HOM05D000435 ORTHO05D000430 1.1e-07 59.7 40 65.0
TPR.G1281 Trifolium pratense HOM05D000435 ORTHO05D013824 1.1e-07 59.7 41 68.3
LjContig00081g0009877 Lotus japonicus HOM05D000435 ORTHO05D000430 1.4e-07 59.3 40 65.0
Lalb_Chr10g0107501 Lupinus albus HOM05D000435 ORTHO05D000430 1.4e-07 59.3 40 65.0
TPR.G1291 Trifolium pratense HOM05D000435 ORTHO05D000430 1.4e-07 59.3 49 57.1
Glyma.02G302200 Glycine max HOM05D000435 ORTHO05D000430 2.5e-07 58.5 40 62.5
Nitab4.5_0005853g0060 Nicotiana tabacum HOM05D068302 ORTHO05D013824 2.5e-07 58.5 37 78.4
Duzib170G0379 Durio zibethinus HOM05D000435 ORTHO05D000430 3.2e-07 58.2 36 72.2
Psat0s4150g0240 Pisum sativum HOM05D000435 ORTHO05D000430 4.2e-07 57.8 41 65.9
Sopen07g033980 Solanum pennellii HOM05D003572 ORTHO05D004118 4.2e-07 57.8 37 73.0
DCAR_017069 Daucus carota HOM05D000435 ORTHO05D000430 7.1e-07 57.0 40 65.0
Manes.03G143200 Manihot esculenta HOM05D000435 ORTHO05D000430 7.1e-07 57.0 40 65.0
Thecc.07G008500 Theobroma cacao HOM05D000435 ORTHO05D000430 7.1e-07 57.0 40 62.5
Phvul.008G280800 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 9.3e-07 56.6 40 60.0
Potri.001G370600 Populus trichocarpa HOM05D000435 ORTHO05D000430 1.6e-06 55.8 43 62.8
Ca_06413_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 2.7e-06 55.1 41 63.4
Gohir.A08G025300 Gossypium hirsutum HOM05D000435 ORTHO05D000430 2.7e-06 55.1 42 61.9
Gohir.D08G035800 Gossypium hirsutum HOM05D000435 ORTHO05D000430 2.7e-06 55.1 42 61.9
Gorai.004G033800 Gossypium raimondii HOM05D000435 ORTHO05D000430 2.7e-06 55.1 42 61.9
Sabra16G0243600 Salix brachista HOM05D000435 ORTHO05D000430 2.7e-06 55.1 40 60.0
SGA_v2.0_scaffold171G38846 Striga asiatica HOM05D000435 ORTHO05D000430 2.7e-06 55.1 35 68.6
VMungo0647G0856 Vigna mungo HOM05D000435 ORTHO05D000430 3.5e-06 54.7 40 57.5
Cfa016927 Carpinus fangiana HOM05D000435 ORTHO05D000430 6.0e-06 53.9 40 62.5
Haze_09858 Corylus avellana HOM05D000435 ORTHO05D000430 6.0e-06 53.9 40 62.5
Migut.M01629 Erythranthe guttata HOM05D000435 ORTHO05D000430 7.9e-06 53.5 41 68.3
MD11G1036200 Malus domestica HOM05D000435 ORTHO05D000430 7.9e-06 53.5 40 57.5
QL08p003237 Quercus lobata HOM05D000435 ORTHO05D000430 7.9e-06 53.5 40 60.0
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 7.9e-06 53.5 40 62.5


User provided reference genes

Program Settings