Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 6.2e-143 510.8 256 100.0
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 3.5e-138 495.0 256 96.9
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 8.2e-127 457.2 257 89.1
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 6.5e-124 447.6 257 88.3
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 1.8e-121 439.5 255 86.7
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 2.6e-120 435.6 255 85.9
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 4.4e-120 434.9 255 85.5
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 6.5e-100 367.9 256 72.7
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 3.2e-99 365.5 286 66.4
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.8e-97 359.8 249 70.3
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 4.0e-97 358.6 255 69.4
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 5.2e-97 358.2 257 69.6
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 9.8e-96 354.0 256 69.1
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 1.8e-94 349.7 256 67.6
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 2.4e-94 349.4 251 69.7
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 2.4e-94 349.4 252 68.7
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 2.0e-93 346.3 248 71.4
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 2.7e-93 345.9 243 71.2
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 5.9e-93 344.7 256 67.2
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 5.9e-93 344.7 267 66.7
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.0e-92 344.0 255 67.5
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 1.3e-92 343.6 236 72.0
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.9e-92 342.4 246 68.3
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 5.0e-92 341.7 247 68.8
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 5.0e-92 341.7 255 67.1
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 6.6e-92 341.3 244 70.1
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 8.6e-92 340.9 251 66.9
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 1.5e-91 340.1 245 68.6
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 1.5e-91 340.1 255 65.9
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.9e-91 339.7 255 68.2
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 2.5e-91 339.3 257 66.1
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 2.5e-91 339.3 238 70.2
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.2e-91 338.6 240 70.8
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 4.2e-91 338.6 246 69.1
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 4.2e-91 338.6 245 69.0
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 5.5e-91 338.2 243 71.2
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 7.2e-91 337.8 242 70.2
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 9.5e-91 337.4 258 66.7
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 9.5e-91 337.4 255 67.1
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 2.1e-90 336.3 257 67.7
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 3.6e-90 335.5 230 68.7
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 3.6e-90 335.5 244 68.0
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 8.0e-90 334.3 257 65.8
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 1.0e-89 334.0 242 65.7
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.0e-89 334.0 244 68.0
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.4e-89 333.6 245 68.2
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 3.0e-89 332.4 244 68.0
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 6.8e-89 331.3 249 67.5
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 8.9e-89 330.9 244 68.4
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 5.7e-88 328.2 242 67.8
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 9.8e-88 327.4 242 67.4
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 9.8e-88 327.4 242 67.4
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.3e-87 327.0 242 67.8
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 2.8e-87 325.9 241 68.5
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 8.3e-87 324.3 238 68.1
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 8.3e-87 324.3 255 64.3
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.4e-86 323.6 288 57.3
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 2.0e-85 319.7 256 63.7
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 3.5e-85 318.9 282 60.6
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 5.9e-85 318.2 251 61.8
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 1.0e-84 317.4 251 61.4
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 2.3e-84 316.2 251 62.2
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 2.9e-84 315.8 232 66.8
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.8e-84 315.5 243 63.4
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.6e-84 314.7 251 61.8
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.6e-84 314.7 251 61.8
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 1.1e-83 313.9 251 62.5
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 2.5e-83 312.8 249 61.4
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 5.6e-83 311.6 241 63.9
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 5.6e-83 311.6 241 63.9
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 7.3e-83 311.2 281 59.8
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 9.5e-83 310.8 241 63.1
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 9.5e-83 310.8 282 59.6
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.6e-82 310.1 244 63.9
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 2.8e-82 309.3 251 60.2
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.7e-82 308.5 281 59.8
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 1.8e-81 306.6 244 63.1
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 3.0e-81 305.8 249 63.9
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 5.2e-81 305.1 277 58.8
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 3.4e-80 302.4 250 60.4
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 7.5e-80 301.2 260 59.6
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 7.5e-80 301.2 269 58.7
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 7.5e-80 301.2 242 64.5
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 1.7e-79 300.1 218 67.0
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 2.2e-79 299.7 253 58.5
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.9e-78 296.6 247 61.1
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 3.0e-76 289.3 233 61.8
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 1.1e-75 287.3 255 58.0
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 3.3e-75 285.8 275 57.5
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.2e-74 283.9 247 55.5
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.2e-74 283.9 281 52.0
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 1.1e-73 280.8 292 52.7
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 3.1e-73 279.3 238 56.3
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 6.4e-71 271.6 232 61.6
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 5.6e-67 258.5 189 69.3
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 1.6e-66 256.9 251 55.8
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 1.4e-65 253.8 246 58.5
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 1.3e-60 237.3 181 66.9
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 8.9e-57 224.6 221 53.4
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 9.2e-54 214.5 271 43.2
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 3.9e-52 209.1 256 44.1
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 4.0e-49 199.1 133 69.9
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 1.6e-45 187.2 124 71.8
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 4.6e-45 185.7 269 46.8
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 4.3e-43 179.1 257 43.2
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.8e-41 173.7 244 46.3
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 5.3e-41 172.2 172 48.3
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 4.8e-34 149.1 121 57.9
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.6e-26 124.0 119 56.3
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.0e-23 114.8 149 49.0
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 3.9e-20 102.8 140 37.9
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.9e-19 100.5 104 57.7
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 9.7e-19 98.2 111 48.6
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 9.1e-09 65.1 46 60.9
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 9.1e-09 65.1 38 81.6
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.9e-07 60.1 50 50.0


User provided reference genes

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