Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.1e-61 240.0 134 100.0
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.0e-59 231.1 134 97.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 9.8e-55 216.9 134 91.0
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.8e-54 215.3 134 90.3
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.4e-53 213.0 134 88.8
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 7.0e-53 210.7 134 88.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 8.0e-49 197.2 133 82.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.2e-41 173.3 141 73.8
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.0e-40 168.3 141 70.9
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 4.6e-36 154.8 133 68.4
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.0e-35 153.7 134 64.9
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.0e-35 153.7 134 65.7
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 4.3e-34 148.3 134 62.7
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.6e-33 146.4 121 68.6
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.3e-32 142.5 129 63.6
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 5.2e-32 141.4 129 65.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.8e-32 141.0 137 60.6
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.8e-32 141.0 137 60.6
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 8.9e-32 140.6 130 60.8
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.2e-31 140.2 128 63.3
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.5e-31 139.8 134 60.4
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 3.4e-31 138.7 130 60.0
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 4.4e-31 138.3 133 61.7
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.3e-30 136.7 135 57.8
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.7e-30 136.3 113 69.9
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.7e-30 135.2 101 73.3
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.4e-29 132.5 137 57.7
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 7.0e-29 131.0 125 59.2
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 9.2e-29 130.6 118 65.3
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.6e-28 129.8 128 60.9
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 2.0e-28 129.4 134 58.2
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 2.0e-28 129.4 134 57.5
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.0e-28 129.4 127 59.1
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.7e-28 129.0 137 56.2
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 3.5e-28 128.6 124 60.5
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.5e-28 128.6 124 60.5
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 3.5e-28 128.6 119 61.3
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 4.6e-28 128.3 118 65.3
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 6.0e-28 127.9 121 58.7
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 6.0e-28 127.9 121 59.5
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 7.8e-28 127.5 119 58.8
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-27 125.9 121 57.0
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 2.3e-27 125.9 131 58.0
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 3.9e-27 125.2 121 57.9
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 3.9e-27 125.2 121 57.9
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.9e-27 125.2 120 56.7
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.9e-27 125.2 120 56.7
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.9e-27 125.2 120 56.7
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 3.9e-27 125.2 129 55.8
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 5.0e-27 124.8 126 57.9
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 5.0e-27 124.8 103 66.0
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 5.0e-27 124.8 117 62.4
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 5.0e-27 124.8 119 58.8
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 6.6e-27 124.4 119 59.7
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 6.6e-27 124.4 132 55.3
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 6.6e-27 124.4 119 58.0
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.6e-27 124.0 125 59.2
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.1e-26 123.6 120 56.7
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.1e-26 123.6 120 56.7
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 1.1e-26 123.6 119 58.0
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.5e-26 123.2 120 59.2
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.9e-26 122.9 117 60.7
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.5e-26 122.5 134 54.5
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.5e-26 122.5 129 55.0
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 3.3e-26 122.1 120 60.0
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 3.3e-26 122.1 119 60.5
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 3.3e-26 122.1 135 52.6
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 5.6e-26 121.3 126 54.0
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 7.3e-26 120.9 120 58.3
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 101 65.3
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.1e-25 119.4 132 55.3
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 2.1e-25 119.4 134 53.7
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 3.6e-25 118.6 121 55.4
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 3.6e-25 118.6 121 55.4
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 3.6e-25 118.6 119 55.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 3.6e-25 118.6 126 55.6
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 3.6e-25 118.6 120 57.5
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 4.7e-25 118.2 130 55.4
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 6.2e-25 117.9 101 62.4
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 8.1e-25 117.5 125 54.4
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 8.1e-25 117.5 119 53.8
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.1e-24 117.1 120 56.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.1e-24 117.1 123 55.3
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.1e-24 117.1 128 54.7
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.4e-24 116.7 108 59.3
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.4e-24 116.7 127 58.3
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.8e-24 116.3 98 62.2
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 4.0e-24 115.2 134 50.7
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 5.2e-24 114.8 117 58.1
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 8.9e-24 114.0 137 51.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.2e-23 113.6 116 56.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.6e-23 112.5 134 49.3
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 3.4e-23 112.1 129 55.8
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 4.4e-23 111.7 116 56.0
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 5.8e-23 111.3 124 52.4
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 5.8e-23 111.3 123 53.7
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 9.8e-23 110.5 130 51.5
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.7e-22 109.8 130 53.1
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.4e-21 106.7 128 53.1
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 2.4e-21 105.9 128 53.1
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 7.1e-21 104.4 141 49.6
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.2e-20 103.6 129 49.6
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 2.7e-20 102.4 122 49.2
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 6.0e-20 101.3 132 50.0
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 3.0e-19 99.0 130 46.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 3.0e-19 99.0 131 47.3
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.9e-19 98.6 126 46.0
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.1e-19 98.2 114 49.1
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 5.6e-18 94.7 73 68.5
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.6e-17 92.0 64 73.4
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.7e-17 91.7 130 42.3
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.4e-16 90.1 100 54.0
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.8e-16 89.7 102 50.0
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.0e-16 88.6 64 73.4
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 9.9e-15 84.0 111 46.8
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 3.7e-14 82.0 89 56.2
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 7.1e-13 77.8 114 41.2
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 3.5e-12 75.5 86 47.7
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 6.0e-12 74.7 108 49.1
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.0e-11 73.9 86 45.3
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.3e-11 73.6 111 39.6
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 9.6e-10 67.4 83 48.2
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 4.7e-09 65.1 102 40.2
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 7.6e-07 57.8 117 35.0


User provided reference genes

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