Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 7.4e-206 720.3 364 100.0
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 2.6e-179 632.1 382 87.2
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 3.2e-177 625.2 370 86.5
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 9.4e-177 623.6 397 82.9
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 9.4e-177 623.6 370 87.0
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 3.5e-171 605.1 366 85.2
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 5.9e-171 604.4 366 85.2
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 1.7e-170 602.8 366 84.7
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 6.1e-168 594.3 371 83.0
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 6.1e-160 567.8 399 77.2
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 9.5e-153 543.9 373 71.6
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.4e-151 540.0 355 79.4
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 2.0e-150 536.2 363 71.6
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 2.2e-149 532.7 363 73.8
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 4.5e-147 525.0 363 71.9
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 7.8e-147 524.2 363 70.5
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 1.5e-145 520.0 363 71.1
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 5.6e-145 518.1 363 69.7
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 7.3e-145 517.7 363 70.5
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 1.4e-143 513.5 359 72.7
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 2.3e-143 512.7 363 71.3
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 4.0e-143 511.9 364 72.0
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.2e-142 510.4 363 70.0
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.5e-142 510.0 363 70.0
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 1.5e-142 510.0 362 69.9
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.0e-142 509.6 363 69.7
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 5.8e-142 508.1 357 72.3
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 7.5e-142 507.7 364 69.2
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 9.8e-142 507.3 413 65.1
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 8.3e-141 504.2 363 69.7
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 1.1e-140 503.8 363 69.7
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 1.4e-140 503.4 363 67.8
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 2.4e-140 502.7 363 69.7
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 2.4e-140 502.7 363 68.0
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 5.4e-140 501.5 363 70.2
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.6e-139 500.0 386 65.5
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 2.7e-139 499.2 386 65.5
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 3.5e-139 498.8 361 69.0
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 7.8e-139 497.7 363 68.0
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.3e-138 496.9 386 65.3
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 6.6e-138 494.6 362 68.2
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 1.1e-137 493.8 365 67.9
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 1.9e-137 493.0 363 66.7
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 3.3e-137 492.3 365 68.2
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 5.6e-137 491.5 373 65.7
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 1.2e-136 490.3 363 66.7
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 1.2e-136 490.3 362 65.7
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 2.1e-136 489.6 365 67.7
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 6.2e-136 488.0 360 68.3
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 6.2e-136 488.0 363 66.4
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 1.4e-135 486.9 364 66.8
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 1.8e-135 486.5 363 65.3
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 1.8e-135 486.5 393 63.9
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 6.8e-135 484.6 363 66.4
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 6.8e-135 484.6 368 66.0
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 6.8e-135 484.6 363 65.3
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 6.8e-135 484.6 364 67.6
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 8.9e-135 484.2 363 66.7
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 1.2e-134 483.8 363 66.7
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 1.5e-134 483.4 362 65.2
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 2.0e-134 483.0 363 65.0
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 3.4e-134 482.3 354 68.1
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 3.4e-134 482.3 354 68.1
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 3.4e-134 482.3 363 65.0
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 4.4e-134 481.9 365 66.3
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 4.4e-134 481.9 367 65.9
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 1.3e-133 480.3 362 66.0
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 1.3e-133 480.3 362 66.0
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 2.2e-133 479.6 364 66.5
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.2e-133 479.6 363 67.5
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 2.2e-133 479.6 360 66.9
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 4.1e-132 475.3 362 65.5
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 5.4e-132 474.9 367 65.9
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 5.4e-132 474.9 367 65.9
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 9.2e-132 474.2 362 65.2
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 9.2e-132 474.2 321 73.8
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 9.2e-132 474.2 362 65.5
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 1.2e-131 473.8 362 64.9
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 2.1e-131 473.0 362 64.9
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 1.3e-130 470.3 362 64.6
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 1.7e-130 469.9 370 65.7
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 2.3e-130 469.5 362 64.9
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 1.1e-129 467.2 356 64.3
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 1.1e-129 467.2 367 65.4
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 1.5e-129 466.8 351 66.4
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 1.5e-129 466.8 367 64.3
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 2.5e-129 466.1 360 64.4
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 4.7e-128 461.8 362 63.8
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 4.7e-128 461.8 369 63.7
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 8.3e-125 451.1 321 70.7
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.4e-124 450.3 363 63.1
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 9.2e-124 447.6 362 61.3
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 2.1e-123 446.4 362 61.0
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 2.7e-123 446.0 362 61.9
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 6.6e-122 441.4 363 60.9
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 8.6e-122 441.0 365 60.5
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 3.3e-121 439.1 334 67.4
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 8.1e-120 434.5 376 62.0
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 8.9e-119 431.0 320 67.5
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 4.2e-116 422.2 284 76.1
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 9.2e-116 421.0 369 60.4
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 2.3e-114 416.4 280 74.3
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 3.9e-114 415.6 386 58.3
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 3.3e-113 412.5 359 58.2
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 7.3e-113 411.4 356 57.9
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 3.6e-112 409.1 284 70.8
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 1.7e-109 400.2 296 66.6
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 6.4e-109 398.3 280 70.7
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 1.6e-107 393.7 283 69.3
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 6.6e-106 388.3 363 57.0
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 6.2e-104 381.7 284 64.4
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.0e-102 376.7 363 56.7
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 4.2e-92 342.4 363 51.8
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 2.3e-90 336.7 288 55.9
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 8.7e-90 334.7 362 48.6
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 6.9e-87 325.1 348 48.3
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 6.5e-85 318.5 337 46.3
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 2.5e-84 316.6 317 50.2
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 3.2e-84 316.2 362 49.4
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 3.2e-84 316.2 269 60.6
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 9.3e-84 314.7 366 49.7
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 8.2e-80 301.6 343 45.8
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 3.1e-79 299.7 368 47.6
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 1.7e-53 214.2 329 38.6
HPP92_027219 Vanilla planifolia HOM05D004259 ORTHO05D005014 3.8e-53 213.0 154 64.9
Nitab4.5_0000017g0120 Nicotiana tabacum HOM05D004259 ORTHO05D005014 3.8e-45 186.4 202 53.0
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 2.2e-40 170.6 375 31.7
CDE10G0377 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 5.4e-39 166.0 137 59.1
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 5.0e-37 159.5 126 63.5
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 2.0e-30 137.5 103 66.0
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 8.6e-29 132.1 116 56.0
Gohir.D12G080700 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.5e-28 130.6 87 73.6
Aa31LG5G22990 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.3e-28 130.2 137 50.4
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.8e-27 127.1 85 70.6
Gorai.011G277900 Gossypium raimondii HOM05D004259 ORTHO05D005014 3.6e-27 126.7 83 74.7
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 6.1e-27 125.9 85 69.4
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 2.3e-26 124.0 339 29.8
Gohir.D10G137766 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.0e-25 120.9 142 49.3
Actinidia38053 Actinidia chinensis HOM05D004259 ORTHO05D005014 3.7e-24 116.7 89 67.4
Gohir.D09G120150 Gossypium hirsutum HOM05D004259 ORTHO05D005014 6.4e-24 115.9 78 73.1
Gohir.D03G074850 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.3e-24 115.5 79 72.2
Gohir.D01G124400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.2e-23 113.6 78 71.8
Gohir.D02G123750 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.1e-23 113.2 78 71.8
Gorai.008G056700 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.1e-23 113.2 79 70.9
Gorai.004G133100 Gossypium raimondii HOM05D004259 ORTHO05D005014 9.2e-23 112.1 78 70.5
Gorai.005G130400 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.2e-22 111.7 78 70.5
Gohir.D04G089650 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.3e-21 108.2 79 69.6
PSO724G0742 Papaver somniferum HOM05D004259 ORTHO05D005014 3.9e-21 106.7 110 52.7
PSO724G0286 Papaver somniferum HOM05D004259 ORTHO05D005014 8.6e-21 105.5 110 51.8
Gorai.012G099900 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.5e-20 104.0 79 65.8
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 4.3e-20 103.2 353 23.5
Gohir.D10G134400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 5.6e-20 102.8 70 71.4
Aa31sc112G60 Aethionema arabicum HOM05D004259 ORTHO05D005014 8.1e-19 99.0 78 60.3
Gorai.006G043100 Gossypium raimondii HOM05D004259 ORTHO05D005014 8.1e-19 99.0 101 54.5
Cc06_g20720 Coffea canephora HOM05D004259 ORTHO05D005014 1.2e-17 95.1 104 52.9
Cc11_g02680 Coffea canephora HOM05D004259 ORTHO05D005014 4.1e-15 86.7 62 64.5
Gohir.D09G088725 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.6e-14 84.7 56 75.0
SEGI_22221 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 2.1e-14 84.3 73 58.9
EL10Ac4g08135 Beta vulgaris HOM05D004259 ORTHO05D005014 5.1e-13 79.7 45 82.2
Sabra15G0136400 Salix brachista HOM05D004259 ORTHO05D004947 7.3e-12 75.9 68 60.3
Cc00_g00370 Coffea canephora HOM05D004259 ORTHO05D005014 4.4e-09 66.6 52 59.6
Gohir.D09G037800 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.7e-08 64.7 43 76.7
Gorai.011G153000 Gossypium raimondii HOM05D004259 ORTHO05D005014 8.4e-08 62.4 45 71.1
Aa31LG5G23020 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.2e-07 60.5 48 64.6
Cc01_g09720 Coffea canephora HOM05D004259 ORTHO05D005014 3.2e-07 60.5 43 67.4
Cc02_g31720 Coffea canephora HOM05D004259 ORTHO05D005014 7.1e-07 59.3 42 66.7
Cc09_g06650 Coffea canephora HOM05D004259 ORTHO05D005014 3.5e-06 57.0 42 61.9


User provided reference genes

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