Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.4e-27 126.3 109 100.0
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 3.5e-26 121.7 109 94.5
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 7.7e-26 120.6 106 98.1
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 2.3e-25 119.0 109 95.4
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 2.3e-25 119.0 109 95.4
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 2.3e-25 119.0 109 95.4
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 3.3e-24 115.2 109 90.8
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 9.5e-24 113.6 104 97.1
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 9.5e-24 113.6 109 92.7
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 1.0e-22 110.2 107 84.1
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 8.9e-22 107.1 107 80.4
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 8.9e-22 107.1 106 85.8
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 1.2e-21 106.7 106 86.8
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 1.5e-21 106.3 107 82.2
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 2.6e-21 105.5 106 81.1
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 3.4e-21 105.1 106 72.6
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 4.4e-21 104.8 106 84.9
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 5.7e-21 104.4 106 79.2
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 7.5e-21 104.0 106 82.1
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 7.5e-21 104.0 106 73.6
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 7.5e-21 104.0 106 84.0
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 9.8e-21 103.6 106 75.5
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 9.8e-21 103.6 99 96.0
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 4.9e-20 101.3 107 81.3
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 6.3e-20 100.9 106 69.8
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 8.3e-20 100.5 107 83.2
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 8.3e-20 100.5 109 88.1
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.4e-19 99.8 108 84.3
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 1.4e-19 99.8 106 86.8
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 1.4e-19 99.8 106 78.3
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 1.4e-19 99.8 105 81.0
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 1.8e-19 99.4 107 76.6
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 1.8e-19 99.4 106 83.0
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 1.8e-19 99.4 106 83.0
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 1.8e-19 99.4 106 79.2
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 2.4e-19 99.0 105 81.9
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 3.1e-19 98.6 106 79.2
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 4.1e-19 98.2 106 80.2
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 5.4e-19 97.8 106 81.1
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 5.4e-19 97.8 105 81.0
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 5.4e-19 97.8 106 81.1
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 7.0e-19 97.4 105 76.2
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 7.0e-19 97.4 105 76.2
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 7.0e-19 97.4 105 81.0
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 9.2e-19 97.1 105 81.9
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 9.2e-19 97.1 107 72.9
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 1.2e-18 96.7 106 71.7
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 1.6e-18 96.3 105 77.1
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 1.6e-18 96.3 105 81.9
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 2.0e-18 95.9 106 54.7
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 2.0e-18 95.9 107 79.4
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 2.7e-18 95.5 106 70.8
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 3.5e-18 95.1 106 84.9
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 3.5e-18 95.1 106 84.9
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 4.5e-18 94.7 105 69.5
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 5.9e-18 94.4 106 79.2
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 5.9e-18 94.4 103 67.0
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 7.8e-18 94.0 106 84.0
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 1.0e-17 93.6 106 78.3
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 1.0e-17 93.6 106 78.3
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.3e-17 93.2 103 85.4
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 1.3e-17 93.2 105 77.1
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 1.3e-17 93.2 106 73.6
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 1.7e-17 92.8 105 81.9
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 3.8e-17 91.7 107 79.4
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 8.6e-17 90.5 107 72.0
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 1.1e-16 90.1 106 73.6
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 4.3e-16 88.2 107 66.4
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 2.1e-15 85.9 107 78.5
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 2.1e-15 85.9 105 79.0
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 3.6e-15 85.1 106 74.5
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 3.6e-15 85.1 105 78.1
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 4.7e-15 84.7 107 66.4
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 6.1e-15 84.3 105 72.4
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 6.1e-15 84.3 107 72.0
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 8.0e-15 84.0 105 79.0
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 1.4e-14 83.2 106 79.2
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 4.0e-14 81.6 107 74.8
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 6.8e-14 80.9 105 74.3
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 6.8e-14 80.9 105 79.0
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 1.5e-13 79.7 54 85.2
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 2.6e-13 79.0 106 79.2
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 3.4e-13 78.6 103 77.7
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 4.4e-13 78.2 102 75.5
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 1.3e-12 76.6 106 75.5
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 2.2e-12 75.9 53 77.4
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 6.4e-12 74.3 107 73.8
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.4e-11 73.2 109 59.6
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 3.2e-11 72.0 53 73.6
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 3.5e-10 68.6 102 60.8
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 1.7e-09 66.2 106 44.3
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 8.6e-09 63.9 107 66.4
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 4.3e-08 61.6 106 72.6
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 6.2e-07 57.8 105 70.5
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 8.0e-07 57.4 106 66.0
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 1.1e-06 57.0 109 66.1
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 1.1e-06 57.0 83 43.4
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 1.4e-06 56.6 105 67.6
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 1.4e-06 56.6 105 66.7
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 2.3e-06 55.8 45 68.9
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 4.0e-06 55.1 105 49.5


User provided reference genes

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