Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002040g0100 Nicotiana tabacum HOM05D014903 ORTHO05D000440 1.5e-149 532.7 253 100.0
Nitab4.5_0010145g0030 Nicotiana tabacum HOM05D014903 ORTHO05D000440 5.8e-101 371.3 269 70.3
Peaxi162Scf00016g03132 Petunia axillaris HOM05D014903 ORTHO05D000440 6.3e-95 351.3 270 68.9
PGSC0003DMG400025186 Solanum tuberosum HOM05D000766 ORTHO05D000587 4.3e-88 328.6 272 63.2
PGSC0003DMG400005126 Solanum tuberosum HOM05D014903 ORTHO05D000440 5.7e-88 328.2 272 62.5
PGSC0003DMG400025839 Solanum tuberosum HOM05D014903 ORTHO05D000440 6.9e-86 321.2 278 60.8
Peaxi162Scf00016g03128 Petunia axillaris HOM05D014903 ORTHO05D000440 1.5e-85 320.1 271 61.3
Solyc01g106970.3 Solanum lycopersicum HOM05D014903 ORTHO05D000440 3.9e-73 278.9 269 53.9
PGSC0003DMG400025838 Solanum tuberosum HOM05D014903 ORTHO05D000440 4.4e-72 275.4 239 61.5
PGSC0003DMG400025736 Solanum tuberosum HOM05D003035 ORTHO05D000440 3.6e-66 255.8 275 52.4
CSS0029725 Camellia sinensis var. sinensis HOM05D003035 ORTHO05D000440 2.3e-28 130.2 268 33.2
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 1.4e-25 120.9 254 32.3
Dinv36205 Davidia involucrata HOM05D001286 ORTHO05D000440 3.1e-25 119.8 252 32.1
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 1.9e-22 110.5 219 32.0
TAR383G0168 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.4e-22 110.2 267 27.0
Sopen01g049250 Solanum pennellii HOM05D014903 ORTHO05D000440 3.2e-22 109.8 92 60.9
Rhsim08G0204600 Rhododendron simsii HOM05D001286 ORTHO05D000440 2.5e-19 100.1 241 29.9
Rhsim01G0011600 Rhododendron simsii HOM05D001286 ORTHO05D000440 3.3e-19 99.8 263 27.4
TAR374G0203 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.3e-19 99.8 269 24.9
Rhsim01G0011200 Rhododendron simsii HOM05D001286 ORTHO05D000440 7.3e-19 98.6 264 28.0
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 1.2e-18 97.8 238 29.0
Aqoxy6G01684 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 4.7e-18 95.9 236 27.5
Rhsim01G0011500 Rhododendron simsii HOM05D001286 ORTHO05D000440 4.7e-18 95.9 263 26.6
Rhsim08G0205300 Rhododendron simsii HOM05D001286 ORTHO05D000440 8.1e-18 95.1 241 30.7
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.4e-17 94.4 271 29.2
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 1.8e-17 94.0 254 28.7
COL.COLO4_21377 Corchorus olitorius HOM05D003035 ORTHO05D000440 5.2e-17 92.4 224 26.8
CSS0044935 Camellia sinensis var. sinensis HOM05D003035 ORTHO05D000440 8.9e-17 91.7 190 33.7
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.2e-16 91.3 151 35.1
Rhsim01G0045800 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.5e-16 90.9 254 26.4
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.5e-16 90.9 240 25.8
PSO013G0206 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-16 90.5 241 29.0
Rhsim08G0205000 Rhododendron simsii HOM05D001286 ORTHO05D000440 3.4e-16 89.7 245 29.0
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 4.4e-16 89.4 247 27.9
MBI19_g10180_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 5.8e-16 89.0 272 25.7
PSO832G1081 Papaver somniferum HOM05D003035 ORTHO05D000440 7.6e-16 88.6 246 27.6
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-15 87.8 268 27.6
Rhsim01G0008500 Rhododendron simsii HOM05D001286 ORTHO05D000440 4.9e-15 85.9 247 26.3
Rhsim01G0011000 Rhododendron simsii HOM05D001286 ORTHO05D000440 4.9e-15 85.9 247 28.7
RhsimUnG0079600 Rhododendron simsii HOM05D001286 ORTHO05D000440 4.9e-15 85.9 247 26.3
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 6.4e-15 85.5 247 27.9
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 8.4e-15 85.1 255 26.3
COL.COLO4_30702 Corchorus olitorius HOM05D003035 ORTHO05D000440 1.4e-14 84.3 223 26.5
TAR627G0263 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.4e-14 84.3 240 27.1
PSO339G3493 Papaver somniferum HOM05D003035 ORTHO05D000440 3.2e-14 83.2 254 25.6
MBI19_g37418_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 5.4e-14 82.4 274 23.7
Thecc.07G034800 Theobroma cacao HOM05D003035 ORTHO05D000440 5.4e-14 82.4 239 28.0
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 9.2e-14 81.6 251 27.9
PSO210G5942 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-13 81.3 248 27.4
PSO210G2030 Papaver somniferum HOM05D003035 ORTHO05D000440 6.0e-13 79.0 272 25.7
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 6.0e-13 79.0 256 25.4
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 6.0e-13 79.0 218 30.3
vmacro19720 Vaccinium macrocarpon HOM05D001286 ORTHO05D000440 1.3e-12 77.8 244 25.0
PSO782G3526 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-12 77.4 258 27.5
PSO017G2999 Papaver somniferum HOM05D001286 ORTHO05D000440 6.6e-12 75.5 249 25.3
Dinv36214 Davidia involucrata HOM05D001286 ORTHO05D000440 8.7e-12 75.1 66 54.5
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 8.7e-12 75.1 249 26.1
MBI19_g39962_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 2.5e-11 73.6 238 23.5
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-11 73.6 253 26.1
PSO384G2918 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-11 73.6 263 25.9
PSO478G3916 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-11 73.6 262 25.6
PSO675G2226 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-11 73.6 251 26.7
Cfa009796 Carpinus fangiana HOM05D001286 ORTHO05D000440 3.3e-11 73.2 254 22.8
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 3.3e-11 73.2 249 26.9
PSO210G2067 Papaver somniferum HOM05D003035 ORTHO05D000440 4.3e-11 72.8 268 24.3
TWI38G2071 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 4.3e-11 72.8 250 25.6
Rhsim10G0179200 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.6e-11 72.4 242 23.6
Hma1.2p1_1067F.1_g253960 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 7.3e-11 72.0 247 25.9
PSO170G5576 Papaver somniferum HOM05D003035 ORTHO05D000440 7.3e-11 72.0 263 24.0
QL04p042854 Quercus lobata HOM05D001286 ORTHO05D000440 7.3e-11 72.0 264 26.5
PSO675G1647 Papaver somniferum HOM05D003035 ORTHO05D000440 9.6e-11 71.6 218 25.7
PSO210G1373 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-10 70.9 264 25.8
PSO478G2076 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-10 70.9 246 25.6
QL04p042652 Quercus lobata HOM05D001286 ORTHO05D000440 1.6e-10 70.9 264 25.8
QL04p042669 Quercus lobata HOM05D001286 ORTHO05D000440 1.6e-10 70.9 264 25.8
COL.COLO4_29491 Corchorus olitorius HOM05D001286 ORTHO05D000440 2.1e-10 70.5 225 26.7
Gorai.009G259100 Gossypium raimondii HOM05D001286 ORTHO05D000440 2.1e-10 70.5 158 28.5
Nn5g27741 Nelumbo nucifera HOM05D001286 ORTHO05D000440 2.8e-10 70.1 127 34.6
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 2.8e-10 70.1 255 27.5
MBI19_g39779_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 3.6e-10 69.7 248 23.0
Gohir.D05G248150 Gossypium hirsutum HOM05D001286 ORTHO05D000440 8.1e-10 68.6 158 27.8
PSO210G0201 Papaver somniferum HOM05D003035 ORTHO05D000440 8.1e-10 68.6 263 25.9
PSO210G4257 Papaver somniferum HOM05D003035 ORTHO05D000440 8.1e-10 68.6 273 24.2
PGSC0003DMG400045693 Solanum tuberosum HOM05D009171 ORTHO05D000440 8.1e-10 68.6 250 26.4
Duzib093G2076 Durio zibethinus HOM05D001286 ORTHO05D000440 1.1e-09 68.2 143 30.8
PSO210G0865 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-09 68.2 246 27.2
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 1.4e-09 67.8 258 26.0
PSO832G3725 Papaver somniferum HOM05D003035 ORTHO05D000440 1.8e-09 67.4 243 25.1
PGSC0003DMG400035386 Solanum tuberosum HOM05D009171 ORTHO05D000440 1.8e-09 67.4 244 24.6
PSO210G1388 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-09 67.0 252 27.0
PSO210G6666 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-09 67.0 252 27.0
SalBow3G0903 Salvia bowleyana HOM05D001286 ORTHO05D000440 2.4e-09 67.0 180 27.2
PGSC0003DMG400039399 Solanum tuberosum HOM05D009171 ORTHO05D000440 2.4e-09 67.0 244 24.6
PGSC0003DMG400041060 Solanum tuberosum HOM05D009171 ORTHO05D000440 2.4e-09 67.0 250 26.4
MBI19_g06975_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 3.1e-09 66.6 268 22.0
PSO210G0858 Papaver somniferum HOM05D003035 ORTHO05D000440 3.1e-09 66.6 247 26.7
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 3.1e-09 66.6 248 27.8
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 4.0e-09 66.2 239 25.1
PSO339G4296 Papaver somniferum HOM05D003035 ORTHO05D000440 4.0e-09 66.2 237 25.3
PSO210G7519 Papaver somniferum HOM05D003035 ORTHO05D000440 5.2e-09 65.9 144 32.6
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 5.2e-09 65.9 249 25.7
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 6.9e-09 65.5 249 24.5
PSO541G2264 Papaver somniferum HOM05D001286 ORTHO05D000440 6.9e-09 65.5 143 32.9
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 9.0e-09 65.1 176 26.7
PSO210G5554 Papaver somniferum HOM05D003035 ORTHO05D000440 9.0e-09 65.1 134 29.1
PSO170G3556 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-08 64.7 242 25.6
PSO017G5637 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-08 64.3 252 23.0
PSO675G8679 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-08 64.3 249 24.5
QL08p010298 Quercus lobata HOM05D003035 ORTHO05D000440 2.0e-08 63.9 233 24.0
Rhsim01G0035900 Rhododendron simsii HOM05D001286 ORTHO05D000440 2.0e-08 63.9 109 33.9
Thecc.01G080400 Theobroma cacao HOM05D003035 ORTHO05D000440 2.0e-08 63.9 224 25.4
Duzib260G0007 Durio zibethinus HOM05D001286 ORTHO05D000440 2.6e-08 63.5 248 25.0
PSO349G0046 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-08 63.2 269 27.5
PSO349G0048 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-08 63.2 269 27.5
PSO349G0094 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-08 63.2 269 27.5
QL07p041255 Quercus lobata HOM05D001286 ORTHO05D000440 3.4e-08 63.2 250 25.6
PSO210G1344 Papaver somniferum HOM05D003035 ORTHO05D000440 4.4e-08 62.8 261 25.7
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 4.4e-08 62.8 101 38.6
SGA_v2.0_scaffold24G10400 Striga asiatica HOM05D001286 ORTHO05D000440 4.4e-08 62.8 252 28.2
Potri.012G106800 Populus trichocarpa HOM05D001286 ORTHO05D000440 5.8e-08 62.4 120 34.2
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 5.8e-08 62.4 235 25.1
Peaxi162Scf00003g03416 Petunia axillaris HOM05D001286 ORTHO05D000440 7.6e-08 62.0 96 37.5
Peaxi162Scf00003g03511 Petunia axillaris HOM05D001286 ORTHO05D000440 7.6e-08 62.0 96 37.5
PSO013G0217 Papaver somniferum HOM05D003035 ORTHO05D000440 9.9e-08 61.6 248 24.6
PSO302G0084 Papaver somniferum HOM05D003035 ORTHO05D000440 9.9e-08 61.6 263 23.6
PGSC0003DMG400043714 Solanum tuberosum HOM05D009171 ORTHO05D000440 9.9e-08 61.6 244 25.0
Dinv31694 Davidia involucrata HOM05D001286 ORTHO05D000440 1.3e-07 61.2 173 27.7
Duzib177G0059 Durio zibethinus HOM05D001286 ORTHO05D000440 1.7e-07 60.8 164 29.3
MD14G1023800 Malus domestica HOM05D001286 ORTHO05D000440 1.7e-07 60.8 108 34.3
PSO210G2835 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-07 60.8 244 24.2
PSO339G4621 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-07 60.8 240 24.6
COL.COLO4_12692 Corchorus olitorius HOM05D000713 ORTHO05D000547 2.9e-07 60.1 210 25.2
PSO170G2963 Papaver somniferum HOM05D003035 ORTHO05D000440 2.9e-07 60.1 248 24.6
Peaxi162Scf20428g00002 Petunia axillaris HOM05D009171 ORTHO05D000440 2.9e-07 60.1 92 37.0
COL.COLO4_29476 Corchorus olitorius HOM05D001286 ORTHO05D000440 3.8e-07 59.7 225 28.0
Prupe.7G109000 Prunus persica HOM05D001286 ORTHO05D000440 3.8e-07 59.7 108 33.3
SGA_v2.0_scaffold31G12907 Striga asiatica HOM05D001286 ORTHO05D000440 3.8e-07 59.7 148 28.4
PSO339G5805 Papaver somniferum HOM05D003035 ORTHO05D000440 4.9e-07 59.3 164 26.8
PSO541G1699 Papaver somniferum HOM05D003035 ORTHO05D000440 4.9e-07 59.3 249 25.3
Thhalv10015924m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 6.4e-07 58.9 145 30.3
PSO339G4508 Papaver somniferum HOM05D003035 ORTHO05D000440 6.4e-07 58.9 243 25.5
THA.LOC104816392 Tarenaya hassleriana HOM05D001286 ORTHO05D000440 6.4e-07 58.9 119 31.9
TWI77G1030 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 6.4e-07 58.9 179 25.7
TAR633G0845 Trochodendron aralioides HOM05D001286 ORTHO05D000440 6.4e-07 58.9 126 31.0
Cpa.g.sc5.10 Carica papaya HOM05D001286 ORTHO05D000440 8.4e-07 58.5 116 31.0
Gohir.A01G205800 Gossypium hirsutum HOM05D001286 ORTHO05D000440 8.4e-07 58.5 101 34.7
Gohir.D01G195200 Gossypium hirsutum HOM05D001286 ORTHO05D000440 8.4e-07 58.5 101 34.7
Gohir.D04G099000 Gossypium hirsutum HOM05D001286 ORTHO05D000440 8.4e-07 58.5 219 26.0
Gorai.002G239400 Gossypium raimondii HOM05D001286 ORTHO05D000440 8.4e-07 58.5 101 34.7
Gorai.009G401400 Gossypium raimondii HOM05D001286 ORTHO05D000440 8.4e-07 58.5 219 26.0
PSO210G1834 Papaver somniferum HOM05D003035 ORTHO05D000440 8.4e-07 58.5 248 27.0
PSO302G0092 Papaver somniferum HOM05D003035 ORTHO05D000440 8.4e-07 58.5 114 30.7
SalBow5G2315 Salvia bowleyana HOM05D001286 ORTHO05D000440 8.4e-07 58.5 106 33.0
Nitab4.5_0000692g0040 Nicotiana tabacum HOM05D001286 ORTHO05D000440 1.1e-06 58.2 174 27.6
PSO210G6030 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-06 58.2 71 38.0
CANSAT64G2057 Cannabis sativa HOM05D001286 ORTHO05D000440 1.4e-06 57.8 108 32.4
Manes.08G026100 Manihot esculenta HOM05D001286 ORTHO05D000440 1.4e-06 57.8 101 33.7
PSO017G5588 Papaver somniferum HOM05D003035 ORTHO05D000440 1.4e-06 57.8 124 27.4
Peaxi162Scf00404g00218 Petunia axillaris HOM05D001286 ORTHO05D000440 1.4e-06 57.8 174 27.6
PSO210G7528 Papaver somniferum HOM05D003035 ORTHO05D000440 1.9e-06 57.4 57 43.9
Potri.016G079300 Populus trichocarpa HOM05D001286 ORTHO05D000440 1.9e-06 57.4 169 26.6
PGSC0003DMG400043026 Solanum tuberosum HOM05D009171 ORTHO05D000440 1.9e-06 57.4 125 30.4
MBI14_g22986_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 2.4e-06 57.0 237 22.4
PSO210G4205 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-06 57.0 86 38.4
PSO210G6800 Papaver somniferum HOM05D001286 ORTHO05D000440 3.2e-06 56.6 143 32.2
PSO724G1319 Papaver somniferum HOM05D003035 ORTHO05D000440 3.2e-06 56.6 269 24.9
PGSC0003DMG400042439 Solanum tuberosum HOM05D009171 ORTHO05D000440 3.2e-06 56.6 108 32.4
Migut.C00878 Erythranthe guttata HOM05D003035 ORTHO05D000440 4.2e-06 56.2 105 36.2
Glyma.13G154400 Glycine max HOM05D001286 ORTHO05D000440 4.2e-06 56.2 108 32.4
Manes.09G054600 Manihot esculenta HOM05D001286 ORTHO05D000440 4.2e-06 56.2 171 26.3
PSO105G0001 Papaver somniferum HOM05D003035 ORTHO05D000440 5.4e-06 55.8 246 28.5
Sabra15G0060500 Salix brachista HOM05D002125 ORTHO05D002105 5.4e-06 55.8 252 25.0
Sabra19G0121800 Salix brachista HOM05D001286 ORTHO05D000440 5.4e-06 55.8 121 32.2
Thecc.05G090300 Theobroma cacao HOM05D001286 ORTHO05D000440 5.4e-06 55.8 108 32.4
Atru.chr2.465 Acer truncatum HOM05D001286 ORTHO05D000440 7.1e-06 55.5 208 25.5
PSO170G1941 Papaver somniferum HOM05D003035 ORTHO05D000440 7.1e-06 55.5 240 23.8
PSO210G3113 Papaver somniferum HOM05D003035 ORTHO05D000440 7.1e-06 55.5 149 30.9
Rhsim11G0165800 Rhododendron simsii HOM05D003035 ORTHO05D000440 7.1e-06 55.5 269 23.8
AL4G43800 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 9.3e-06 55.1 92 30.4
PSO210G3833 Papaver somniferum HOM05D003035 ORTHO05D000440 9.3e-06 55.1 248 25.4


User provided reference genes

Program Settings